Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24i09
         (505 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p...    29   1.4  
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr...    29   1.4  
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr...    29   1.4  
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.      29   1.4  
Z70211-3|CAA94156.1|  363|Caenorhabditis elegans Hypothetical pr...    28   3.3  
U97549-1|AAB52850.1|  128|Caenorhabditis elegans Hypothetical pr...    27   7.7  

>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
            protein C47D12.1c protein.
          Length = 4053

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 294  KYRRVLANLNKWQLYSELNI*DFESFLFVSSCF 196
            KY+     LN +  Y  LNI D++ F+ ++SCF
Sbjct: 1786 KYKVPKLILNTFLRYLRLNIYDYDLFIVIASCF 1818


>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
            C47D12.1b protein.
          Length = 4061

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 294  KYRRVLANLNKWQLYSELNI*DFESFLFVSSCF 196
            KY+     LN +  Y  LNI D++ F+ ++SCF
Sbjct: 1792 KYKVPKLILNTFLRYLRLNIYDYDLFIVIASCF 1824


>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
            C47D12.1a protein.
          Length = 4064

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 294  KYRRVLANLNKWQLYSELNI*DFESFLFVSSCF 196
            KY+     LN +  Y  LNI D++ F+ ++SCF
Sbjct: 1792 KYKVPKLILNTFLRYLRLNIYDYDLFIVIASCF 1824


>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
          Length = 4064

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 294  KYRRVLANLNKWQLYSELNI*DFESFLFVSSCF 196
            KY+     LN +  Y  LNI D++ F+ ++SCF
Sbjct: 1792 KYKVPKLILNTFLRYLRLNIYDYDLFIVIASCF 1824


>Z70211-3|CAA94156.1|  363|Caenorhabditis elegans Hypothetical
           protein K11E4.3 protein.
          Length = 363

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 19/75 (25%), Positives = 35/75 (46%)
 Frame = +2

Query: 50  ILTGFYDTNELHSLTKNKYFYSFTLPQSKYYETKIRFCARVLRV*IYCVKQEETNKKLSK 229
           ++T ++D+N      KN  FY   L     + TK     ++  +    +K+E+  K L  
Sbjct: 29  VITQYFDSNRRGFFLKNIMFYLLNLK----FATKKNCKPKINNLKYMKLKEEQNTKSLPN 84

Query: 230 SYILSSE*SCHLFKF 274
           S  ++++   HLF F
Sbjct: 85  SKDINTD-QTHLFTF 98


>U97549-1|AAB52850.1|  128|Caenorhabditis elegans Hypothetical
           protein F15A8.4 protein.
          Length = 128

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +2

Query: 206 ETNKKLSKSYILSSE*SCHLFKFARTLRYFTRFKFVSVLSK 328
           E N      Y++ S+   +LF F+ T+R F  +K+   + K
Sbjct: 57  EANGAFKPFYVIISDLGSNLFVFSSTIRIFIYYKYNHEIKK 97


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,263,910
Number of Sequences: 27780
Number of extensions: 161039
Number of successful extensions: 331
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 331
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)