Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24i07
(591 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0338 + 2718212-2718251,2718519-2718607,2718997-2719050,271... 77 8e-15
01_01_0340 + 2727135-2727205,2727470-2727639,2728418-2728506,272... 72 3e-13
04_03_0113 + 11388585-11388655,11388741-11388852,11390182-113902... 54 6e-08
08_02_0558 + 18668856-18668926,18669064-18669175,18669834-186698... 45 5e-05
01_01_0343 + 2744123-2744311,2745238-2745291,2745517-2745587,274... 45 5e-05
01_01_0344 + 2751218-2751288,2751793-2751904,2751965-2752012 39 0.003
01_01_0339 + 2720647-2720790,2721241-2721282,2721580-2721761,272... 39 0.003
01_01_0342 + 2740699-2740839,2742021-2742085,2742221-2742332,274... 36 0.024
01_01_0337 + 2717104-2717174,2717266-2717395 36 0.024
05_05_0114 - 22488172-22488279,22488414-22488511,22488616-224887... 31 0.91
03_06_0661 - 35369687-35369749,35369842-35370040,35370149-353706... 29 3.7
04_03_0092 + 11079185-11079589,11081319-11081409,11081507-110816... 28 6.4
08_02_1156 - 24760332-24761530,24762757-24763648 27 8.5
>01_01_0338 +
2718212-2718251,2718519-2718607,2718997-2719050,
2719201-2719271,2719375-2719456,2719561-2719657,
2719752-2719873
Length = 184
Score = 77.4 bits (182), Expect = 8e-15
Identities = 41/94 (43%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Frame = +3
Query: 312 VLEILHAAVGLVPSSVFVVLMQVYSRVFLVCGALLATQGATTSPGLPLCILAWSITEIIR 491
V +ILH VGLV S V L Q+ SR+FL G L + + + +++WSITEIIR
Sbjct: 5 VAQILHGLVGLVRSPVSATLPQIGSRLFLTWGILWSFPETHSHILVTSLVISWSITEIIR 64
Query: 492 YAYYAL-NLVDIVPSSLTFLRYSTFLVMYPLGIT 590
Y+++ + PS L +LRYSTF+V+YP GI+
Sbjct: 65 YSFFGMKETFGFAPSWLLWLRYSTFMVLYPTGIS 98
>01_01_0340 +
2727135-2727205,2727470-2727639,2728418-2728506,
2729017-2729070,2729310-2729380,2729504-2729585,
2729678-2729774,2729902-2729972
Length = 234
Score = 72.1 bits (169), Expect = 3e-13
Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 14/161 (8%)
Frame = +3
Query: 147 GLSIGKIYLLVYNAAQTLGWSYMLWQSLVHFLNRGTLDAFWSEIKWTVIIFQNAAVLEIL 326
G + ++YL +YN +GW+ +L + L++G +A ++ I+ ++ Q AA+LE+L
Sbjct: 5 GSMVRRLYLSIYNWVAFIGWAQVLCYMTLALLDKGH-EAVYAAIERPLLFTQTAAILEVL 63
Query: 327 -------------HAAVGLVPSSVFVVLMQVYSRVFLVCGALLATQGATTSPGLPLCILA 467
GLV S V L Q+ R+F+ G L + + + ++
Sbjct: 64 VFPSSLPLFIRENWRLRGLVRSPVSSTLPQITGRLFITWGILWSFPETQSYIFVTSLLIC 123
Query: 468 WSITEIIRYAYYALN-LVDIVPSSLTFLRYSTFLVMYPLGI 587
W I E+ RY++Y + PS L +LRYSTF+ +P+G+
Sbjct: 124 WCIIEVTRYSFYGMKESFGFTPSWLLWLRYSTFIACFPVGV 164
>04_03_0113 +
11388585-11388655,11388741-11388852,11390182-11390235,
11390386-11390456,11390560-11390641,11390741-11390837,
11390914-11391053
Length = 208
Score = 54.4 bits (125), Expect = 6e-08
Identities = 23/45 (51%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = +3
Query: 459 ILAWSITEIIRYAYYALN-LVDIVPSSLTFLRYSTFLVMYPLGIT 590
+++WSITEIIRY+++ + PS L +LRYSTF+V+YP GI+
Sbjct: 72 VISWSITEIIRYSFFGMKEAFGFAPSWLLWLRYSTFMVLYPTGIS 116
Score = 34.7 bits (76), Expect = 0.056
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = +3
Query: 147 GLSIGKIYLLVYNAAQTLGWSYMLWQSLVHFLNRGTLDAFWSEIKWTVIIFQNAAVLE 320
G ++ ++YL VYN A GW+ +L+ ++ L G +A ++ ++ + Q AA LE
Sbjct: 5 GSAVRRLYLSVYNWAVFFGWAQVLYYAVTTLLESGH-EAVYAAVERPLQFAQTAAFLE 61
>08_02_0558 +
18668856-18668926,18669064-18669175,18669834-18669887,
18670121-18670191,18670291-18670372,18670463-18670559,
18670928-18670998
Length = 185
Score = 44.8 bits (101), Expect = 5e-05
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +3
Query: 459 ILAWSITEIIRYAYYALN-LVDIVPSSLTFLRYSTFLVMYPLG 584
+++W ITE+ RY +Y + PS L +LRYSTF+V P+G
Sbjct: 72 LISWCITEVTRYCFYGMKESFGFTPSWLLWLRYSTFIVCLPVG 114
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/53 (26%), Positives = 29/53 (54%)
Frame = +3
Query: 162 KIYLLVYNAAQTLGWSYMLWQSLVHFLNRGTLDAFWSEIKWTVIIFQNAAVLE 320
++YL YN +GW + W ++ L G +A ++ ++ ++ Q AA++E
Sbjct: 10 RLYLSFYNWIVFIGWVQVSWSMILALLENG-YEAVYAAVEQHLLFAQTAAIME 61
>01_01_0343 +
2744123-2744311,2745238-2745291,2745517-2745587,
2745704-2745785,2746242-2746340
Length = 164
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +3
Query: 396 LVCGALLATQGATTSPGLPLCILAWSITEIIRYAYYALN-LVDIVPSSLTFLRYSTFLVM 572
+ CG + T TS +++W ITE+ RY++ + PS L +LRYSTF+V
Sbjct: 58 MFCGGQIHTHIFVTS-----LLISWCITEVTRYSFNGMKESFGFTPSWLLWLRYSTFIVC 112
Query: 573 YPLGI 587
+P+G+
Sbjct: 113 FPIGM 117
>01_01_0344 + 2751218-2751288,2751793-2751904,2751965-2752012
Length = 76
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/73 (27%), Positives = 40/73 (54%)
Frame = +3
Query: 129 MKSNTSGLSIGKIYLLVYNAAQTLGWSYMLWQSLVHFLNRGTLDAFWSEIKWTVIIFQNA 308
M N SG + ++YL +YN +GW + W ++ L G +A ++ ++ ++ Q A
Sbjct: 1 MAGNASG--VRRLYLSLYNWIVFIGWVQVSWFMILALLKNG-YEAVYAAVEQHLLFAQTA 57
Query: 309 AVLEILHAAVGLV 347
A++E+ + V L+
Sbjct: 58 AIMELYNHFVSLL 70
>01_01_0339 +
2720647-2720790,2721241-2721282,2721580-2721761,
2721828-2721939,2722814-2722867,2723077-2723115,
2723116-2723186,2723313-2723394,2723493-2723589,
2723727-2723797
Length = 297
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 5/48 (10%)
Frame = +3
Query: 459 ILAWSI----TEIIRYAYYALN-LVDIVPSSLTFLRYSTFLVMYPLGI 587
I +W I ++IRY+++ + PS L +LRYSTF+V YP+G+
Sbjct: 180 ITSWKIYYNSLQVIRYSFFGIKESFGFTPSWLLWLRYSTFIVCYPVGM 227
>01_01_0342 +
2740699-2740839,2742021-2742085,2742221-2742332,
2742388-2742435
Length = 121
Score = 35.9 bits (79), Expect = 0.024
Identities = 16/62 (25%), Positives = 35/62 (56%)
Frame = +3
Query: 162 KIYLLVYNAAQTLGWSYMLWQSLVHFLNRGTLDAFWSEIKWTVIIFQNAAVLEILHAAVG 341
++YL VYN +GW + W ++ L + +A ++ ++ ++ Q AA++E+ + V
Sbjct: 55 RLYLSVYNWIVFIGWVQVSWSMILALLEK-RYEAVYAAVEQHLLFAQTAAIMELYNFFVS 113
Query: 342 LV 347
L+
Sbjct: 114 LL 115
>01_01_0337 + 2717104-2717174,2717266-2717395
Length = 66
Score = 35.9 bits (79), Expect = 0.024
Identities = 18/59 (30%), Positives = 34/59 (57%)
Frame = +3
Query: 147 GLSIGKIYLLVYNAAQTLGWSYMLWQSLVHFLNRGTLDAFWSEIKWTVIIFQNAAVLEI 323
G ++ ++YL VYN A GW+ +L+ ++ L G +A ++ ++ + Q AA LE+
Sbjct: 5 GSAVRRLYLSVYNWAVFFGWAQVLYYAVTTLLESGH-EAVYAAVERPLQFAQTAAFLEV 62
>05_05_0114 -
22488172-22488279,22488414-22488511,22488616-22488784,
22489310-22489377,22490485-22490521,22490660-22490741,
22490845-22490903
Length = 206
Score = 30.7 bits (66), Expect = 0.91
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = +3
Query: 162 KIYLLVYNAAQTLGWSYMLWQSLVHFLNRGTLDAFWS---EIKWTVIIFQNAAVLEILHA 332
++YLL YN+ Q LGW L + L ++ + ++ ++ W A+LE +HA
Sbjct: 6 QLYLLSYNSVQALGWFVALLRLLPCLAPPSSVHSSYAVAGDLTW--------AILETIHA 57
Query: 333 AVG 341
A+G
Sbjct: 58 AIG 60
>03_06_0661 -
35369687-35369749,35369842-35370040,35370149-35370641,
35372982-35373126
Length = 299
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -3
Query: 448 NPGLVVAPCVASKAPH-TRNTLEYTC 374
+PG + APC PH TR +++TC
Sbjct: 208 SPGGISAPCKVEYGPHITRREIQFTC 233
>04_03_0092 +
11079185-11079589,11081319-11081409,11081507-11081612,
11081694-11081976,11082062-11082210,11083582-11083735,
11083837-11084793
Length = 714
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1
Query: 267 KKHPKYHGSKNVLMTAIACKTIQEFERRYRQEDKSFQS 154
K+H +H + + A K I E+E++YRQE +S
Sbjct: 344 KRHWSHHIDEGASLEAEWNKKIVEYEKKYRQEAAELKS 381
>08_02_1156 - 24760332-24761530,24762757-24763648
Length = 696
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -2
Query: 500 VGISYDFSYRPGEYTQRQPWTCSRS 426
+GISY F PG Y + TC RS
Sbjct: 36 IGISYPFGVEPGCYHEGFNLTCDRS 60
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,990,319
Number of Sequences: 37544
Number of extensions: 297347
Number of successful extensions: 734
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1400060088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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