Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24i07
         (591 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF022985-14|AAB69975.2|  218|Caenorhabditis elegans Hypothetical...   124   5e-29
Z50874-9|CAA90769.1|  202|Caenorhabditis elegans Hypothetical pr...    44   8e-05
U23170-4|AAC46701.1|  463|Caenorhabditis elegans Hypothetical pr...    31   0.46 
Z82264-7|CAB05164.3|  499|Caenorhabditis elegans Hypothetical pr...    28   4.3  
Z70034-9|CAA93849.1|  159|Caenorhabditis elegans Hypothetical pr...    28   4.3  
AF101307-3|AAC69212.2|  315|Caenorhabditis elegans Hypothetical ...    28   4.3  
Z69302-10|CAA93267.1|  295|Caenorhabditis elegans Hypothetical p...    27   7.5  
Z47074-3|CAA87376.1|  295|Caenorhabditis elegans Hypothetical pr...    27   7.5  
AF008590-1|AAB63299.1|  295|Caenorhabditis elegans paraquat resp...    27   7.5  
Z81564-9|CAB04575.1|  724|Caenorhabditis elegans Hypothetical pr...    27   10.0 
Z81038-12|CAB02758.2|  380|Caenorhabditis elegans Hypothetical p...    27   10.0 
Z73906-4|CAA98117.1|  508|Caenorhabditis elegans Hypothetical pr...    27   10.0 

>AF022985-14|AAB69975.2|  218|Caenorhabditis elegans Hypothetical
           protein T15B7.2 protein.
          Length = 218

 Score =  124 bits (299), Expect = 5e-29
 Identities = 63/142 (44%), Positives = 92/142 (64%), Gaps = 1/142 (0%)
 Frame = +3

Query: 168 YLLVYNAAQTLGWSYMLWQSLVHFLNRGTLDAFWSEIKWTVIIFQNAAVLEILHAAVGLV 347
           YL+ YN  Q LGWS +L ++++   N  T    +  +++ + IFQ AA+LE++HA VGLV
Sbjct: 6   YLVAYNVLQILGWSAILVKTVLGLANGLTWPQLYESVEFELKIFQTAAILEVIHAIVGLV 65

Query: 348 PSSVFVVLMQVYSRVFLVCGALLATQGATTSPGLPLCILAWSITEIIRYAYYALN-LVDI 524
            S V    MQV SRV LV   L     A  S G+PL ++AWS+TE+IRY++YAL+ L   
Sbjct: 66  RSPVGTTAMQVTSRVVLVWPILHLCSTARFSIGVPLLLVAWSVTEVIRYSFYALSVLKQP 125

Query: 525 VPSSLTFLRYSTFLVMYPLGIT 590
           +P  L +LRY+ F V+YP+G++
Sbjct: 126 IPYFLLYLRYTLFYVLYPMGVS 147


>Z50874-9|CAA90769.1|  202|Caenorhabditis elegans Hypothetical
           protein R10E4.9 protein.
          Length = 202

 Score = 44.0 bits (99), Expect = 8e-05
 Identities = 30/108 (27%), Positives = 52/108 (48%)
 Frame = +3

Query: 267 WSEIKWTVIIFQNAAVLEILHAAVGLVPSSVFVVLMQVYSRVFLVCGALLATQGATTSPG 446
           + EI W ++   +   L+I  +   L  S+   V +QV  R+ ++  A         +  
Sbjct: 38  YPEIMWFLLFITSLQYLDIPFSFF-LTKSNPVAVFVQVSGRLLVLWVASHMVSWKYAAFS 96

Query: 447 LPLCILAWSITEIIRYAYYALNLVDIVPSSLTFLRYSTFLVMYPLGIT 590
           L   +  + ++E+ R  YY  N +     SLT+LRY+ F V+YP+G T
Sbjct: 97  L---VAVYLLSELCRGPYYLSNCLGTPNRSLTWLRYNAFKVLYPVGFT 141


>U23170-4|AAC46701.1|  463|Caenorhabditis elegans Hypothetical
           protein F58F12.3 protein.
          Length = 463

 Score = 31.5 bits (68), Expect = 0.46
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +3

Query: 228 LVHFLNRGTLDAFWSEIKWTVIIFQNAAVLEILHAAVGLVPSSVFVV 368
           L+H L R TLD     IK     F+  A+L+IL +AV  + + + +V
Sbjct: 270 LLHALQRDTLDDKMKIIKHAETYFRGPAILQILESAVLSLSNDIHIV 316


>Z82264-7|CAB05164.3|  499|Caenorhabditis elegans Hypothetical
           protein C49C3.13 protein.
          Length = 499

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
 Frame = -3

Query: 415 SKAPHTRNTLEYTC-----IRTTNTLDGTKPTAACKISNT 311
           S APH +    YTC     + TT+T+  TKPT       T
Sbjct: 232 STAPHIKYDTSYTCASTTTVSTTSTVTTTKPTTTTTTPTT 271


>Z70034-9|CAA93849.1|  159|Caenorhabditis elegans Hypothetical
           protein C18E9.9 protein.
          Length = 159

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +3

Query: 228 LVHFLNRGTLDAFWSEIKWTVIIFQNA-AVLEILHAAVGLVPSSVFVVLMQVYSRVFLVC 404
           ++   + G    FW     +++ F  A AV+ ++   +    S  FV++   YS  F VC
Sbjct: 25  IIFMASPGVRGWFWFICLTSILEFLAAIAVVAVVFLDLTFTRSGQFVIIELAYSGAFCVC 84

Query: 405 GAL 413
            AL
Sbjct: 85  SAL 87


>AF101307-3|AAC69212.2|  315|Caenorhabditis elegans Hypothetical
           protein F41H8.2 protein.
          Length = 315

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 13/29 (44%), Positives = 22/29 (75%)
 Frame = -2

Query: 215 HVRPSKSLSGVIDKKINLSNRKSRGVAFH 129
           +VRP K +S +I KKI+ ++ +S G+A+H
Sbjct: 288 NVRPKKKVSSIIVKKISTAHTQS-GLAWH 315


>Z69302-10|CAA93267.1|  295|Caenorhabditis elegans Hypothetical
           protein F40F8.7 protein.
          Length = 295

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 22/78 (28%), Positives = 31/78 (39%)
 Frame = -2

Query: 590 SNTEGIHHEKRGIPQKRQR*GYNIDQIESVVGISYDFSYRPGEYTQRQPWTCSRSLCCQ* 411
           ++ EG    K+ I Q     GY       V G     SY    Y +  P  C+   C   
Sbjct: 142 NDKEGWCRNKKYIEQTEN--GYMCTVCRKVYGRYNSVSYHVTIYHRNPPIKCNVPNC--- 196

Query: 410 SSTYQKHS*IHLHKNYKY 357
             T ++   IH HKNY++
Sbjct: 197 QFTTREARYIHFHKNYRH 214


>Z47074-3|CAA87376.1|  295|Caenorhabditis elegans Hypothetical
           protein F40F8.7 protein.
          Length = 295

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 22/78 (28%), Positives = 31/78 (39%)
 Frame = -2

Query: 590 SNTEGIHHEKRGIPQKRQR*GYNIDQIESVVGISYDFSYRPGEYTQRQPWTCSRSLCCQ* 411
           ++ EG    K+ I Q     GY       V G     SY    Y +  P  C+   C   
Sbjct: 142 NDKEGWCRNKKYIEQTEN--GYMCTVCRKVYGRYNSVSYHVTIYHRNPPIKCNVPNC--- 196

Query: 410 SSTYQKHS*IHLHKNYKY 357
             T ++   IH HKNY++
Sbjct: 197 QFTTREARYIHFHKNYRH 214


>AF008590-1|AAB63299.1|  295|Caenorhabditis elegans paraquat
           responsive protein protein.
          Length = 295

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 22/78 (28%), Positives = 31/78 (39%)
 Frame = -2

Query: 590 SNTEGIHHEKRGIPQKRQR*GYNIDQIESVVGISYDFSYRPGEYTQRQPWTCSRSLCCQ* 411
           ++ EG    K+ I Q     GY       V G     SY    Y +  P  C+   C   
Sbjct: 142 NDKEGWCRNKKYIEQTEN--GYMCTVCRKVYGRYNSVSYHVTIYHRNPPIKCNVPNC--- 196

Query: 410 SSTYQKHS*IHLHKNYKY 357
             T ++   IH HKNY++
Sbjct: 197 QFTTREARYIHFHKNYRH 214


>Z81564-9|CAB04575.1|  724|Caenorhabditis elegans Hypothetical
           protein K05C4.9 protein.
          Length = 724

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +1

Query: 376 KCIQECFWYVELYWQHKERLQVQGCLCV 459
           KC Q+ F+ ++ Y+   +   + GCL +
Sbjct: 333 KCFQDIFFLLKEYYTQNKEYDIAGCLAI 360


>Z81038-12|CAB02758.2|  380|Caenorhabditis elegans Hypothetical
           protein C25A1.3 protein.
          Length = 380

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -1

Query: 246 GSKNVLMTAIACKTIQEFERRYRQ 175
           G+K+V+M  +A  +IQ+ E RY+Q
Sbjct: 76  GAKDVVMADVADVSIQQAEERYKQ 99


>Z73906-4|CAA98117.1|  508|Caenorhabditis elegans Hypothetical
           protein D2030.3 protein.
          Length = 508

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -2

Query: 173 KINLSNRKSRGVAFHCLVGHCLN 105
           ++ ++N K+R VAF CL   C+N
Sbjct: 208 ELGINNPKNRSVAFACLRSMCVN 230


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,480,338
Number of Sequences: 27780
Number of extensions: 281983
Number of successful extensions: 738
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)