Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24i06
(558 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50310-1|AAA92538.1| 317|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z81046-2|CAB02824.1| 295|Caenorhabditis elegans Hypothetical pr... 29 1.7
U42847-3|AAA83605.2| 210|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z77670-2|CAB01250.1| 588|Caenorhabditis elegans Hypothetical pr... 29 3.0
AJ512335-1|CAD54509.1| 588|Caenorhabditis elegans trehalase pro... 29 3.0
Z81067-5|CAD92378.1| 965|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z49907-11|CAF31469.1| 844|Caenorhabditis elegans Hypothetical p... 28 4.0
Z49907-10|CAC42250.1| 875|Caenorhabditis elegans Hypothetical p... 28 4.0
Z49907-9|CAA90092.1| 880|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z48367-8|CAF31471.1| 844|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z48367-7|CAC42266.1| 875|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z48367-6|CAA88325.1| 880|Caenorhabditis elegans Hypothetical pr... 28 4.0
AF319613-1|AAG49523.1| 880|Caenorhabditis elegans CLC-type chlo... 28 4.0
AF173171-1|AAF13164.1| 844|Caenorhabditis elegans CLC chloride ... 28 4.0
AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily a... 28 4.0
>U50310-1|AAA92538.1| 317|Caenorhabditis elegans Hypothetical
protein ZC487.2 protein.
Length = 317
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +1
Query: 82 MILLISSSGLQSVRVRFSTQYLYLPCFEIKKGKLTAMTVVKLKS 213
+ILLI +S VR+ + +LPC ++ + K+ +T+V +KS
Sbjct: 275 LILLIFNS---KVRLATVVLFKFLPCLKVNQPKVATVTIVLMKS 315
>Z81046-2|CAB02824.1| 295|Caenorhabditis elegans Hypothetical
protein C37E2.3 protein.
Length = 295
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 7/40 (17%)
Frame = +1
Query: 355 YHERGAPDSTSE------YMRFYSKIFIGIADYQRTW-YP 453
YH+R AP +++ Y+ FY I +G+ Y R W YP
Sbjct: 210 YHKRDAPSNSTSWMISVVYVTFYFIIVLGVKYYNRMWVYP 249
>U42847-3|AAA83605.2| 210|Caenorhabditis elegans Hypothetical
protein F39H12.3 protein.
Length = 210
Score = 29.5 bits (63), Expect = 1.7
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +2
Query: 323 LPEGLKELMSDITREVLRTQPPNICDF 403
+P L+ ++ + REVLR+QP ++ +F
Sbjct: 9 VPHDLRPILEALAREVLRSQPSDVAEF 35
>Z77670-2|CAB01250.1| 588|Caenorhabditis elegans Hypothetical
protein W05E10.4 protein.
Length = 588
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 84 DTVNFLVGFAICSGSILDSVSLLALF*NKKRKVD 185
DT N F C+G ILD+V+ +L+ + K VD
Sbjct: 30 DTTNSNNSFIYCNGPILDAVNYHSLYNDSKEFVD 63
>AJ512335-1|CAD54509.1| 588|Caenorhabditis elegans trehalase
protein.
Length = 588
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 84 DTVNFLVGFAICSGSILDSVSLLALF*NKKRKVD 185
DT N F C+G ILD+V+ +L+ + K VD
Sbjct: 30 DTTNSNNSFIYCNGPILDAVNYHSLYNDSKEFVD 63
>Z81067-5|CAD92378.1| 965|Caenorhabditis elegans Hypothetical
protein F23A7.7 protein.
Length = 965
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -2
Query: 170 FISKQGK*RY*VENRTRTDCKPDEEINSIMH-GSQAKGFTCDAARQNLAS 24
FI + G RY V+ + D E + ++ SQ +GF CD Q L S
Sbjct: 79 FIDENGDFRYPVDELGHQEVDLDVETDESLYLNSQQEGFLCDERSQMLRS 128
>Z49907-11|CAF31469.1| 844|Caenorhabditis elegans Hypothetical
protein B0491.8c protein.
Length = 844
Score = 28.3 bits (60), Expect = 4.0
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 8/120 (6%)
Frame = -1
Query: 462 FTARIPCSL-VISNTDKYFAIKSHIFGG*VRSTSLVISDMSSL----SPSGSANTLEQPC 298
F+A I L I +T KYFA+K++ G + S ++ ++ SG+ Q
Sbjct: 217 FSAPIGAVLYAIESTSKYFAVKNYWRGFLAATCSAIVFRCANFFVTAEQSGTITAFYQTR 276
Query: 297 FWRSSFI---LPIYIFLRFMAFILHYRFNLF*F*FNDCHCCQLSFFYFKTRQVKILSRES 127
F F+ LPI++ L F++ ++ F +F H Q+S F K R K++ R +
Sbjct: 277 FPTDCFLVEELPIFLLLGFISGLMG-SFFIF------IH-RQISIFRSKNRVYKLIFRNN 328
>Z49907-10|CAC42250.1| 875|Caenorhabditis elegans Hypothetical
protein B0491.8b protein.
Length = 875
Score = 28.3 bits (60), Expect = 4.0
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 8/120 (6%)
Frame = -1
Query: 462 FTARIPCSL-VISNTDKYFAIKSHIFGG*VRSTSLVISDMSSL----SPSGSANTLEQPC 298
F+A I L I +T KYFA+K++ G + S ++ ++ SG+ Q
Sbjct: 248 FSAPIGAVLYAIESTSKYFAVKNYWRGFLAATCSAIVFRCANFFVTAEQSGTITAFYQTR 307
Query: 297 FWRSSFI---LPIYIFLRFMAFILHYRFNLF*F*FNDCHCCQLSFFYFKTRQVKILSRES 127
F F+ LPI++ L F++ ++ F +F H Q+S F K R K++ R +
Sbjct: 308 FPTDCFLVEELPIFLLLGFISGLMG-SFFIF------IH-RQISIFRSKNRVYKLIFRNN 359
>Z49907-9|CAA90092.1| 880|Caenorhabditis elegans Hypothetical
protein B0491.8a protein.
Length = 880
Score = 28.3 bits (60), Expect = 4.0
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 8/120 (6%)
Frame = -1
Query: 462 FTARIPCSL-VISNTDKYFAIKSHIFGG*VRSTSLVISDMSSL----SPSGSANTLEQPC 298
F+A I L I +T KYFA+K++ G + S ++ ++ SG+ Q
Sbjct: 248 FSAPIGAVLYAIESTSKYFAVKNYWRGFLAATCSAIVFRCANFFVTAEQSGTITAFYQTR 307
Query: 297 FWRSSFI---LPIYIFLRFMAFILHYRFNLF*F*FNDCHCCQLSFFYFKTRQVKILSRES 127
F F+ LPI++ L F++ ++ F +F H Q+S F K R K++ R +
Sbjct: 308 FPTDCFLVEELPIFLLLGFISGLMG-SFFIF------IH-RQISIFRSKNRVYKLIFRNN 359
>Z48367-8|CAF31471.1| 844|Caenorhabditis elegans Hypothetical
protein B0491.8c protein.
Length = 844
Score = 28.3 bits (60), Expect = 4.0
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 8/120 (6%)
Frame = -1
Query: 462 FTARIPCSL-VISNTDKYFAIKSHIFGG*VRSTSLVISDMSSL----SPSGSANTLEQPC 298
F+A I L I +T KYFA+K++ G + S ++ ++ SG+ Q
Sbjct: 217 FSAPIGAVLYAIESTSKYFAVKNYWRGFLAATCSAIVFRCANFFVTAEQSGTITAFYQTR 276
Query: 297 FWRSSFI---LPIYIFLRFMAFILHYRFNLF*F*FNDCHCCQLSFFYFKTRQVKILSRES 127
F F+ LPI++ L F++ ++ F +F H Q+S F K R K++ R +
Sbjct: 277 FPTDCFLVEELPIFLLLGFISGLMG-SFFIF------IH-RQISIFRSKNRVYKLIFRNN 328
>Z48367-7|CAC42266.1| 875|Caenorhabditis elegans Hypothetical
protein B0491.8b protein.
Length = 875
Score = 28.3 bits (60), Expect = 4.0
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 8/120 (6%)
Frame = -1
Query: 462 FTARIPCSL-VISNTDKYFAIKSHIFGG*VRSTSLVISDMSSL----SPSGSANTLEQPC 298
F+A I L I +T KYFA+K++ G + S ++ ++ SG+ Q
Sbjct: 248 FSAPIGAVLYAIESTSKYFAVKNYWRGFLAATCSAIVFRCANFFVTAEQSGTITAFYQTR 307
Query: 297 FWRSSFI---LPIYIFLRFMAFILHYRFNLF*F*FNDCHCCQLSFFYFKTRQVKILSRES 127
F F+ LPI++ L F++ ++ F +F H Q+S F K R K++ R +
Sbjct: 308 FPTDCFLVEELPIFLLLGFISGLMG-SFFIF------IH-RQISIFRSKNRVYKLIFRNN 359
>Z48367-6|CAA88325.1| 880|Caenorhabditis elegans Hypothetical
protein B0491.8a protein.
Length = 880
Score = 28.3 bits (60), Expect = 4.0
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 8/120 (6%)
Frame = -1
Query: 462 FTARIPCSL-VISNTDKYFAIKSHIFGG*VRSTSLVISDMSSL----SPSGSANTLEQPC 298
F+A I L I +T KYFA+K++ G + S ++ ++ SG+ Q
Sbjct: 248 FSAPIGAVLYAIESTSKYFAVKNYWRGFLAATCSAIVFRCANFFVTAEQSGTITAFYQTR 307
Query: 297 FWRSSFI---LPIYIFLRFMAFILHYRFNLF*F*FNDCHCCQLSFFYFKTRQVKILSRES 127
F F+ LPI++ L F++ ++ F +F H Q+S F K R K++ R +
Sbjct: 308 FPTDCFLVEELPIFLLLGFISGLMG-SFFIF------IH-RQISIFRSKNRVYKLIFRNN 359
>AF319613-1|AAG49523.1| 880|Caenorhabditis elegans CLC-type
chloride channel CLH-2b protein.
Length = 880
Score = 28.3 bits (60), Expect = 4.0
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 8/120 (6%)
Frame = -1
Query: 462 FTARIPCSL-VISNTDKYFAIKSHIFGG*VRSTSLVISDMSSL----SPSGSANTLEQPC 298
F+A I L I +T KYFA+K++ G + S ++ ++ SG+ Q
Sbjct: 248 FSAPIGAVLYAIESTSKYFAVKNYWRGFLAATCSAIVFRCANFFVTAEQSGTITAFYQTR 307
Query: 297 FWRSSFI---LPIYIFLRFMAFILHYRFNLF*F*FNDCHCCQLSFFYFKTRQVKILSRES 127
F F+ LPI++ L F++ ++ F +F H Q+S F K R K++ R +
Sbjct: 308 FPTDCFLVEELPIFLLLGFISGLMG-SFFIF------IH-RQISIFRSKNRVYKLIFRNN 359
>AF173171-1|AAF13164.1| 844|Caenorhabditis elegans CLC chloride
channel protein protein.
Length = 844
Score = 28.3 bits (60), Expect = 4.0
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 8/120 (6%)
Frame = -1
Query: 462 FTARIPCSL-VISNTDKYFAIKSHIFGG*VRSTSLVISDMSSL----SPSGSANTLEQPC 298
F+A I L I +T KYFA+K++ G + S ++ ++ SG+ Q
Sbjct: 217 FSAPIGAVLYAIESTSKYFAVKNYWRGFLAATCSAIVFRCANFFVTAEQSGTITAFYQTR 276
Query: 297 FWRSSFI---LPIYIFLRFMAFILHYRFNLF*F*FNDCHCCQLSFFYFKTRQVKILSRES 127
F F+ LPI++ L F++ ++ F +F H Q+S F K R K++ R +
Sbjct: 277 FPTDCFLVEELPIFLLLGFISGLMG-SFFIF------IH-RQISIFRSKNRVYKLIFRNN 328
>AC024763-4|AAF60519.1| 1347|Caenorhabditis elegans Temporarily
assigned gene nameprotein 168 protein.
Length = 1347
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 424 IADYQRTWYPSSKDTRRLMRL*ALSIGASPP 516
++ Y R WYPS+ + ++ L A+ +G PP
Sbjct: 306 VSAYVR-WYPSNSNAEHVVSLNAVKVGVCPP 335
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,979,880
Number of Sequences: 27780
Number of extensions: 260915
Number of successful extensions: 633
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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