Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24i02
         (580 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC016351-1|AAH16351.1|  297|Homo sapiens endonuclease G protein.       35   0.18 
BC004922-1|AAH04922.1|  297|Homo sapiens endonuclease G protein.       35   0.18 
AL441992-12|CAI15412.1|  297|Homo sapiens endonuclease G protein.      35   0.18 
AB020523-1|BAA76752.1|  368|Homo sapiens endonuclease G-like pro...    34   0.32 
AK092650-1|BAC03936.1|  577|Homo sapiens protein ( Homo sapiens ...    33   0.55 
X79444-1|CAA55963.1|  297|Homo sapiens endonuclease protein.           33   0.96 

>BC016351-1|AAH16351.1|  297|Homo sapiens endonuclease G protein.
          Length = 297

 Score = 35.1 bits (77), Expect = 0.18
 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = +1

Query: 337 RGHLAAKTDFIFAT-GQRATFFFINAAPQWQPFNAGNWNSLEQKLRARIGEAGYNTTVYT 513
           RGHLAA  +  ++      TF+  N APQ    N   WN+LE+  R+ +  +  N  V T
Sbjct: 139 RGHLAAAANHRWSQKAMDDTFYLSNVAPQVPHLNQNAWNNLEKYSRS-LTRSYQNVYVCT 197

Query: 514 G 516
           G
Sbjct: 198 G 198


>BC004922-1|AAH04922.1|  297|Homo sapiens endonuclease G protein.
          Length = 297

 Score = 35.1 bits (77), Expect = 0.18
 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = +1

Query: 337 RGHLAAKTDFIFAT-GQRATFFFINAAPQWQPFNAGNWNSLEQKLRARIGEAGYNTTVYT 513
           RGHLAA  +  ++      TF+  N APQ    N   WN+LE+  R+ +  +  N  V T
Sbjct: 139 RGHLAAAANHRWSQKAMDDTFYLSNVAPQVPHLNQNAWNNLEKYSRS-LTRSYQNVYVCT 197

Query: 514 G 516
           G
Sbjct: 198 G 198


>AL441992-12|CAI15412.1|  297|Homo sapiens endonuclease G protein.
          Length = 297

 Score = 35.1 bits (77), Expect = 0.18
 Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = +1

Query: 337 RGHLAAKTDFIFAT-GQRATFFFINAAPQWQPFNAGNWNSLEQKLRARIGEAGYNTTVYT 513
           RGHLAA  +  ++      TF+  N APQ    N   WN+LE+  R+ +  +  N  V T
Sbjct: 139 RGHLAAAANHRWSQKAMDDTFYLSNVAPQVPHLNQNAWNNLEKYSRS-LTRSYQNVYVCT 197

Query: 514 G 516
           G
Sbjct: 198 G 198


>AB020523-1|BAA76752.1|  368|Homo sapiens endonuclease G-like
           protein-1 protein.
          Length = 368

 Score = 34.3 bits (75), Expect = 0.32
 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
 Frame = +1

Query: 334 ARGHLAAKTDFIFATGQRA-TFFFINAAPQWQPFNAGNWNSLEQKLRARIGEAGYNTTVY 510
           +RGH+A   +  F++   A TF+  N  PQ    N+G WN +E   R  + E   +  V 
Sbjct: 137 SRGHMAPAGNNKFSSKAMAETFYLSNIVPQDFDNNSGYWNRIEMYCR-ELTERFEDVWVV 195

Query: 511 TGTFGVTQLRDQNGQLV 561
           +G   + Q R    ++V
Sbjct: 196 SGPLTLPQTRGDGKKIV 212


>AK092650-1|BAC03936.1|  577|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35331 fis, clone PROST2014659. ).
          Length = 577

 Score = 33.5 bits (73), Expect = 0.55
 Identities = 26/82 (31%), Positives = 40/82 (48%)
 Frame = +2

Query: 281 PSWVQNLLANTLQIHNIWPVATSPRKLTSFLLLVSEPRFFSSMPPLSGNHLMRVTGTRLN 460
           P   Q LL  + + ++  P  T+PR L   LLLVS   + SS+P     H M +  TR +
Sbjct: 206 PPLCQTLLLVSARHYSSSPPDTTPR-LCQTLLLVSARHYSSSLPDAPPLHEMLLLSTRCS 264

Query: 461 RNSVHALVKQDIILLFTREPSA 526
            +   A    +++L+  R  SA
Sbjct: 265 SSPPDAPPLHEMLLVSARCSSA 286


>X79444-1|CAA55963.1|  297|Homo sapiens endonuclease protein.
          Length = 297

 Score = 32.7 bits (71), Expect = 0.96
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +1

Query: 337 RGHLAAKTDFIFAT-GQRATFFFINAAPQWQPFNAGNWNSLEQKLRARIGEAGYNTTVYT 513
           RGHLAA  +  ++      TF+    APQ    N   WN+LE+  R+ +  +  N  V T
Sbjct: 139 RGHLAAAANHRWSQKAMDDTFYLSKVAPQVPHLNQNAWNNLEKYSRS-LTRSYQNVYVCT 197

Query: 514 G 516
           G
Sbjct: 198 G 198


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,930,028
Number of Sequences: 237096
Number of extensions: 2405078
Number of successful extensions: 8473
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8473
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5985693436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)