Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24h22
(284 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1104 + 27623632-27623795,27624052-27624175,27624316-276248... 30 0.33
04_01_0402 + 5276017-5276241,5276299-5276753,5277004-5277070,527... 28 1.3
12_02_0501 + 19742007-19742143,19742253-19742398,19742559-197425... 27 2.3
12_02_0868 - 23839077-23839382,23839626-23839935,23840003-238401... 26 4.1
11_06_0356 - 22654329-22654571,22654695-22654898,22655065-226553... 26 4.1
04_03_0741 + 19187333-19188868,19189264-19189490,19189578-191898... 26 5.4
12_02_0628 + 21357876-21359921 25 7.1
07_03_0327 + 16817149-16817438,16818029-16818224,16818309-168196... 25 7.1
03_03_0274 - 16089322-16089365,16089604-16089616,16090367-160907... 25 7.1
03_02_0382 - 7958634-7959272,7959358-7959583,7959725-7959810,795... 25 7.1
03_02_0231 - 6608910-6608997,6609169-6609320,6609561-6609608 25 7.1
09_06_0244 + 21822811-21823246,21823337-21823468,21823949-218240... 25 9.4
07_03_1143 - 24294516-24294528,24294656-24297926,24298011-24298056 25 9.4
07_03_0522 - 19021915-19022649,19022725-19023012,19023091-190235... 25 9.4
05_05_0310 - 23991461-23991652,23991780-23991965,23992813-239930... 25 9.4
02_05_0939 + 32914936-32915055,32916674-32916823,32917160-329173... 25 9.4
01_05_0253 + 19968193-19969140 25 9.4
>06_03_1104 +
27623632-27623795,27624052-27624175,27624316-27624832,
27624943-27625073,27625161-27625567,27625690-27625963,
27626195-27626814,27627424-27627859
Length = 890
Score = 29.9 bits (64), Expect = 0.33
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 173 HYRLIVNGEVERYAPDQRYVVTLXGSRTXDVVQQFAG 283
HY+ I+ G + + D ++T+ G RT +V ++AG
Sbjct: 325 HYQHIIEGTINAMSRDDERLLTIEGCRTALLVLRYAG 361
>04_01_0402 +
5276017-5276241,5276299-5276753,5277004-5277070,
5277288-5277389
Length = 282
Score = 27.9 bits (59), Expect = 1.3
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 173 HYRLIVNGEVERYAPDQRYVVTLXGSRTXDV 265
H RL V+G+VE P+ VV + G+R DV
Sbjct: 185 HIRLGVDGDVEVAKPEPTRVVGVGGARIVDV 215
>12_02_0501 +
19742007-19742143,19742253-19742398,19742559-19742596,
19742715-19742765,19743010-19743125,19743348-19743447,
19743537-19743572,19743724-19743774,19743906-19744029,
19744319-19744444,19744572-19744729
Length = 360
Score = 27.1 bits (57), Expect = 2.3
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 5 LYSRL*AXVVTWV*YVLSPNKMGNLRILVWLGLVSAALACELNPGPGV 148
LY+R A VVT L ++ + +L LGL + A + PGP +
Sbjct: 55 LYARYRAGVVTGDMLALPKRRLAAIGLLEALGLAAGMSAGAMLPGPAI 102
>12_02_0868 -
23839077-23839382,23839626-23839935,23840003-23840128,
23840202-23840436,23840649-23840684,23841033-23841162,
23841318-23841410,23841556-23841678,23841769-23841835,
23841937-23842028,23842136-23842291
Length = 557
Score = 26.2 bits (55), Expect = 4.1
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1
Query: 52 LKPK*NGQSENFSVAGPSVRGTGLRAKSRSWSRFKVTW 165
LKPK S + A P A+ +SW+ VTW
Sbjct: 145 LKPKLIAVSNKVAFANPKAPVYPRLAQGKSWNEMTVTW 182
>11_06_0356 -
22654329-22654571,22654695-22654898,22655065-22655319,
22655435-22655626,22655738-22656046,22656149-22656355,
22656450-22656527,22657493-22657747,22657850-22658000,
22658269-22658500,22658631-22658886,22658960-22659091
Length = 837
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 131 NPGPGVGSKSPGDNHYRLIVNGEVERYAPDQRYVVT 238
NPGP + G + + L V+G + R+A + V+T
Sbjct: 430 NPGPSPYTIQLGPSEFLLEVSGTIGRFANSRSNVIT 465
>04_03_0741 +
19187333-19188868,19189264-19189490,19189578-19189899,
19190311-19190399,19190882-19191128,19191756-19191884,
19191967-19192182,19192256-19192379,19192857-19193095
Length = 1042
Score = 25.8 bits (54), Expect = 5.4
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Frame = -1
Query: 146 LQDLDLARRPVPRTLGPATLKFS----DCPFYLGLRR 48
L L L RP+P L PA FS D F+LG+ R
Sbjct: 132 LDPLALEERPIPDVLDPAFYGFSEADLDREFFLGVWR 168
>12_02_0628 + 21357876-21359921
Length = 681
Score = 25.4 bits (53), Expect = 7.1
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +2
Query: 143 GVGSKSPGDNHYRLIVNGEVERYAPDQRY 229
G+G G YRL + V+ PD++Y
Sbjct: 332 GIGKSKSGTPDYRLCIVRNVDANDPDRKY 360
>07_03_0327 +
16817149-16817438,16818029-16818224,16818309-16819642,
16819925-16820097,16820257-16820503,16820599-16820893,
16820934-16820982,16821357-16821562
Length = 929
Score = 25.4 bits (53), Expect = 7.1
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 215 PDQRYVVTLXGSRTXDVVQQFAG 283
PD YV+ L GS T D+++ G
Sbjct: 137 PDLNYVIYLDGSETSDLIEVHNG 159
>03_03_0274 -
16089322-16089365,16089604-16089616,16090367-16090714,
16090771-16090974,16091403-16091504,16091710-16091741,
16092668-16093655,16094461-16094711,16095786-16097795,
16097903-16097954
Length = 1347
Score = 25.4 bits (53), Expect = 7.1
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 59 PNKMGNLRILVWLGLVSAALACELNP 136
P ++GN L+WL LV L+ ++ P
Sbjct: 445 PREIGNCTSLLWLNLVGNRLSGQIPP 470
>03_02_0382 -
7958634-7959272,7959358-7959583,7959725-7959810,
7959909-7959989,7960102-7960200,7960348-7960466,
7960557-7960677,7960831-7960881,7961041-7961142,
7962610-7962717,7962877-7962962,7963353-7963449
Length = 604
Score = 25.4 bits (53), Expect = 7.1
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -1
Query: 164 QVTLNLLQDLDLARRPVPRTLGPATLKFSDCP 69
++ L LL LD + + G T+K S CP
Sbjct: 422 EINLQLLSSLDTTKVKDKKDRGVLTIKVSSCP 453
>03_02_0231 - 6608910-6608997,6609169-6609320,6609561-6609608
Length = 95
Score = 25.4 bits (53), Expect = 7.1
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +2
Query: 134 PGPGVGSKSPGDNH--YRLIVNGEVERYAPDQRYVVTLXGS 250
P G G P H + +I+NGEVE P+ + + G+
Sbjct: 9 PNNGSGPPPPSLKHVIFHVIINGEVEGIGPNSPKLSYMSGT 49
>09_06_0244 +
21822811-21823246,21823337-21823468,21823949-21824037,
21824135-21824224,21825033-21825603,21826097-21826734,
21826978-21827098,21827223-21827337,21828234-21829723,
21829830-21829901,21830151-21830196,21830413-21830515,
21830591-21830674,21831035-21831475,21831651-21831746,
21831896-21832045,21832131-21832274,21832414-21832527,
21832621-21832803,21832901-21832945,21833058-21833192
Length = 1764
Score = 25.0 bits (52), Expect = 9.4
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 284 SPQTVVLRXECGNRPESRHISD 219
+P T +L GN P + H+SD
Sbjct: 50 APSTSLLAQVAGNHPHATHVSD 71
>07_03_1143 - 24294516-24294528,24294656-24297926,24298011-24298056
Length = 1109
Score = 25.0 bits (52), Expect = 9.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 59 PNKMGNLRILVWLGLVSAALACELNPGPG 145
P +GNL L+WL L L+ E+ P G
Sbjct: 423 PASIGNLTSLLWLMLAGNQLSGEIPPEIG 451
>07_03_0522 -
19021915-19022649,19022725-19023012,19023091-19023548,
19023939-19024329,19024422-19024668,19024742-19024815,
19024905-19024961
Length = 749
Score = 25.0 bits (52), Expect = 9.4
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -1
Query: 179 CSDCLQVTLNLLQDL 135
CSD +Q TLN+L+DL
Sbjct: 239 CSDDMQKTLNVLKDL 253
>05_05_0310 -
23991461-23991652,23991780-23991965,23992813-23993094,
23993220-23993382,23993477-23993661,23994154-23994205,
23994292-23994392,23995244-23995417
Length = 444
Score = 25.0 bits (52), Expect = 9.4
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 164 GDNHYRLIVNGEVERYAPDQRYVVTLXG 247
G HYR+IV+GE +Y P+ +V G
Sbjct: 190 GVYHYRIIVDGE-PKYVPELPHVADEGG 216
>02_05_0939 + 32914936-32915055,32916674-32916823,32917160-32917305,
32917396-32917552,32917695-32917753,32918180-32918291,
32918901-32919050,32919180-32919316,32919977-32920123,
32920197-32920298,32920674-32920731,32920840-32920941,
32921905-32921942,32922031-32922157,32922228-32922401,
32922542-32922628,32923838-32923947,32924654-32924714,
32925338-32925515,32925628-32925833,32926108-32926227,
32927202-32927423,32927708-32927847,32927976-32928087,
32928254-32928304,32928384-32928473,32928630-32928800,
32928897-32929049,32929860-32930036,32930131-32930268,
32930363-32930433,32930837-32930936,32931156-32931212,
32931301-32931357,32931451-32931531,32931614-32931696,
32931831-32931966
Length = 1459
Score = 25.0 bits (52), Expect = 9.4
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +2
Query: 140 PGVGSKSPGDNHYRLIVN 193
PGVG++ P ++H+ IVN
Sbjct: 1235 PGVGAQPPSNSHWDNIVN 1252
>01_05_0253 + 19968193-19969140
Length = 315
Score = 25.0 bits (52), Expect = 9.4
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1
Query: 143 QDLDLARRPVPRTLGPATLK 84
+DLD ARR + LG AT K
Sbjct: 296 EDLDAARRAIDAELGAATAK 315
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,125,011
Number of Sequences: 37544
Number of extensions: 130401
Number of successful extensions: 360
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 360
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 291966432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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