Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24h22
         (284 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41264-7|AAA82427.2|  819|Caenorhabditis elegans Hypothetical pr...    37   0.003
L15314-2|AAF99983.1|  322|Caenorhabditis elegans Hypothetical pr...    29   0.71 
AC006638-10|AAK85488.1|  242|Caenorhabditis elegans Hypothetical...    28   0.94 
AF098987-5|ABD63222.1|  263|Caenorhabditis elegans Hypothetical ...    27   1.6  
AF098987-4|AAC67429.1|  496|Caenorhabditis elegans Hypothetical ...    27   1.6  
U53153-7|AAC69037.1| 1280|Caenorhabditis elegans Hypothetical pr...    25   6.6  
U28971-3|AAK68670.1|  319|Caenorhabditis elegans Hypothetical pr...    25   6.6  
AC006644-4|AAF39835.1| 1030|Caenorhabditis elegans Hypothetical ...    25   8.7  
AC006644-3|AAF39838.2|  491|Caenorhabditis elegans Hypothetical ...    25   8.7  

>U41264-7|AAA82427.2|  819|Caenorhabditis elegans Hypothetical
           protein F10E7.4 protein.
          Length = 819

 Score = 36.7 bits (81), Expect = 0.003
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 7/61 (11%)
 Frame = +2

Query: 122 CELNPGPGVGSKSPGDNHYRLIVNGEVER-------YAPDQRYVVTLXGSRTXDVVQQFA 280
           C + P    G KSPG N Y + +NG   +       + P + Y V++ G RT   V+ F 
Sbjct: 27  CTIKPYEAKGDKSPGSNGYVIEINGTTTKSMDISKGFVPGEIYKVSIRGWRTQYTVKTFR 86

Query: 281 G 283
           G
Sbjct: 87  G 87


>L15314-2|AAF99983.1|  322|Caenorhabditis elegans Hypothetical
           protein K06H7.7 protein.
          Length = 322

 Score = 28.7 bits (61), Expect = 0.71
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
 Frame = -1

Query: 218 PAHIAQLLR*QSACSDC----LQVTLNLLQDLDLARRPVP 111
           P H  ++L+   +C DC    L V + L   LDL+  P+P
Sbjct: 170 PGHFVEMLKEDCSCRDCGSADLAVKVRLTVPLDLSDIPIP 209


>AC006638-10|AAK85488.1|  242|Caenorhabditis elegans Hypothetical
           protein F41G4.8 protein.
          Length = 242

 Score = 28.3 bits (60), Expect = 0.94
 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = +2

Query: 92  WLGLVSAALACELNPGPGVGSKSPGDNHY--RLIVNGEVERYAPDQRYVVTLXGSRTXD 262
           +L L+SAA++C+     G G ++  D ++  RLI N  +  Y   + Y +T       D
Sbjct: 5   FLYLLSAAVSCQFQDFEGSGEEALIDEYWLQRLIENVGIPHYLTQKAYQLTANAKEHVD 63


>AF098987-5|ABD63222.1|  263|Caenorhabditis elegans Hypothetical
           protein F40H3.1b protein.
          Length = 263

 Score = 27.5 bits (58), Expect = 1.6
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +1

Query: 148 RFKVTWRQSLQADC*RRS*AICAGSEICR 234
           R K+ WRQS+  +C  +S A CA  E C+
Sbjct: 201 RSKIRWRQSVCEEC--KSVAECANCEECK 227


>AF098987-4|AAC67429.1|  496|Caenorhabditis elegans Hypothetical
           protein F40H3.1a protein.
          Length = 496

 Score = 27.5 bits (58), Expect = 1.6
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +1

Query: 148 RFKVTWRQSLQADC*RRS*AICAGSEICR 234
           R K+ WRQS+  +C  +S A CA  E C+
Sbjct: 434 RSKIRWRQSVCEEC--KSVAECANCEECK 460


>U53153-7|AAC69037.1| 1280|Caenorhabditis elegans Hypothetical
           protein T19A5.1 protein.
          Length = 1280

 Score = 25.4 bits (53), Expect = 6.6
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +2

Query: 173 HYRLIVNGEVERYAPDQRYVVTLXGSRTXDVVQ 271
           H+++  +G+  +  PD RY + L GS T  + Q
Sbjct: 25  HWKISEDGKKIQAVPDTRYHLKLPGSLTDFITQ 57


>U28971-3|AAK68670.1|  319|Caenorhabditis elegans Hypothetical
           protein B0244.7 protein.
          Length = 319

 Score = 25.4 bits (53), Expect = 6.6
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +2

Query: 53  LSPNKMGNLRILVWLGLVSAALACELNPGPGVGSKSP 163
           LS  K   L +L+W+  ++ A++C +     +G  SP
Sbjct: 160 LSLRKCVLLILLLWVSAITVAISCGIVEAAFIGRNSP 196


>AC006644-4|AAF39835.1| 1030|Caenorhabditis elegans Hypothetical
           protein F55A3.3 protein.
          Length = 1030

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = +1

Query: 217 GSEICRDSGRFPH 255
           GS++ +DSG+FPH
Sbjct: 576 GSQVGKDSGQFPH 588


>AC006644-3|AAF39838.2|  491|Caenorhabditis elegans Hypothetical
           protein F55A3.7 protein.
          Length = 491

 Score = 25.0 bits (52), Expect = 8.7
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = +1

Query: 217 GSEICRDSGRFPH 255
           GS++ +DSG+FPH
Sbjct: 290 GSQVGKDSGQFPH 302


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,813,067
Number of Sequences: 27780
Number of extensions: 102787
Number of successful extensions: 203
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 203
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 270584450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)