Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24h19
(619 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42843-5|AAA83597.2| 375|Caenorhabditis elegans Beclin (human a... 87 7e-18
Z49127-11|CAA88952.2| 452|Caenorhabditis elegans Hypothetical p... 32 0.29
AL033535-4|CAA22134.2| 452|Caenorhabditis elegans Hypothetical ... 32 0.29
AF099919-4|AAC68791.1| 230|Caenorhabditis elegans Hypothetical ... 31 0.50
AC199172-10|ABO33271.1| 302|Caenorhabditis elegans F-box a prot... 29 2.0
AC006750-2|AAO38570.1| 478|Caenorhabditis elegans Hypothetical ... 29 3.5
AC006750-1|AAF60535.1| 527|Caenorhabditis elegans Hypothetical ... 29 3.5
U46671-4|AAA85749.1| 429|Caenorhabditis elegans Hypothetical pr... 28 6.1
U97189-9|AAC48161.1| 263|Caenorhabditis elegans Hypothetical pr... 27 8.1
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 27 8.1
>U42843-5|AAA83597.2| 375|Caenorhabditis elegans Beclin (human
autophagy) homologprotein 1 protein.
Length = 375
Score = 87.4 bits (207), Expect = 7e-18
Identities = 57/160 (35%), Positives = 81/160 (50%), Gaps = 3/160 (1%)
Frame = +3
Query: 15 GQFGIINNFRLGRLPTAPVDWSEINAAWGQTVLLLSSLARKINFNFQRYKLVPYGNHSYI 194
G G IN FRLG L APV+++EINAA GQ VLLL L +I V G+HSYI
Sbjct: 209 GIVGEINGFRLGYLKDAPVEFTEINAALGQIVLLLEILLERIGVQHHELMPVAMGSHSYI 268
Query: 195 EVLE---DQKVLPLYGSGGFRFLWDTKFDAAMVAFLDCLQQFKEQVEMGNTGFCLPYRID 365
++ D + LYG G + D + FL L+ ++++ N F PY+I
Sbjct: 269 KLRRNGIDMETYALYGQ-GTPLSGSSGIDPGIRRFLQLLEFLLKELKDRNKNFKPPYQIH 327
Query: 366 KGKIEDTASPPHAYSIKIQFNSEEHWTKALKYMLTNLKWA 485
+ D Y+ + N++ WT+A+ MLT+LK A
Sbjct: 328 ADSLVDNGV---KYNAVMTLNTDVRWTRAMALMLTDLKAA 364
>Z49127-11|CAA88952.2| 452|Caenorhabditis elegans Hypothetical
protein F13D12.9 protein.
Length = 452
Score = 32.3 bits (70), Expect = 0.29
Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 6/143 (4%)
Frame = +3
Query: 96 WGQTVLLLSSLARKINFNFQRYKLV--PYGNHSYIEVLE--DQKVLPLYGSGGFRFLWDT 263
WGQ ++ + L +I FQ Y+LV Y IE++E +K LP Y F+ + D
Sbjct: 274 WGQKKVVEAGLEGRIELKFQDYRLVKEKYTRVVSIEMIEAVGEKYLPQY----FQIINDV 329
Query: 264 KFDAAMVAF--LDCLQQFKEQVEMGNTGFCLPYRIDKGKIEDTASPPHAYSIKIQFNSEE 437
D + A + C + +Q ++ F Y G + + + S+ +
Sbjct: 330 LTDGGIAALQAITCPDAYYDQYR-SSSDFIKKYIFPGGHLPSLGA--ISQSLPKTLKQTD 386
Query: 438 HWTKALKYMLTNLKWALTWISSQ 506
++ Y +T W W+ ++
Sbjct: 387 LFSMGHHYSMTLEHWFFAWMKAK 409
>AL033535-4|CAA22134.2| 452|Caenorhabditis elegans Hypothetical
protein F13D12.9 protein.
Length = 452
Score = 32.3 bits (70), Expect = 0.29
Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 6/143 (4%)
Frame = +3
Query: 96 WGQTVLLLSSLARKINFNFQRYKLV--PYGNHSYIEVLE--DQKVLPLYGSGGFRFLWDT 263
WGQ ++ + L +I FQ Y+LV Y IE++E +K LP Y F+ + D
Sbjct: 274 WGQKKVVEAGLEGRIELKFQDYRLVKEKYTRVVSIEMIEAVGEKYLPQY----FQIINDV 329
Query: 264 KFDAAMVAF--LDCLQQFKEQVEMGNTGFCLPYRIDKGKIEDTASPPHAYSIKIQFNSEE 437
D + A + C + +Q ++ F Y G + + + S+ +
Sbjct: 330 LTDGGIAALQAITCPDAYYDQYR-SSSDFIKKYIFPGGHLPSLGA--ISQSLPKTLKQTD 386
Query: 438 HWTKALKYMLTNLKWALTWISSQ 506
++ Y +T W W+ ++
Sbjct: 387 LFSMGHHYSMTLEHWFFAWMKAK 409
>AF099919-4|AAC68791.1| 230|Caenorhabditis elegans Hypothetical
protein F40G9.12 protein.
Length = 230
Score = 31.5 bits (68), Expect = 0.50
Identities = 19/82 (23%), Positives = 33/82 (40%)
Frame = -1
Query: 541 INYCGSDLSSQNCDDIHVKAHFKFVSIYLRALVQCSSELNWIFMEYACGGDAVSSILPLS 362
I Y + S +C + H + I ++ L + ++WI + ++ L L
Sbjct: 21 ICYKNYETSGDHCPRVLSCGH-TYCEICIQELASLRNNVHWILTSFRVSSAFPTNFLVLE 79
Query: 361 ILYGRQKPVLPISTCSLNCCRQ 296
IL G+ K +L C L Q
Sbjct: 80 ILNGKAKDMLQCGVCQLTYSSQ 101
>AC199172-10|ABO33271.1| 302|Caenorhabditis elegans F-box a protein
protein 37 protein.
Length = 302
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 149 FPALQISTIRESLIHRSLGRSESLTVIRFGWFPVSLG--YQIRCGNGRIFRL 298
FP + +R+ L+ R + ++ ++ + + W PV +Q C G F L
Sbjct: 223 FPIQNVIKVRDDLLQRCMFQNCTIVISKLNWKPVEFARIFQPDCAGGDTFTL 274
>AC006750-2|AAO38570.1| 478|Caenorhabditis elegans Hypothetical
protein Y39F10B.1b protein.
Length = 478
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/71 (19%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = -1
Query: 430 ELNWIFMEYACGGDAVSSILPLSILYGRQKPVLPISTCSLN-CCRQSKNATIAASNLVSQ 254
+ NW+ ++ + + + + + +KP + +S+ SLN + + ++ L+S+
Sbjct: 102 QTNWLRLKKKTNDEKYRGEVQIKLEFNYEKPSMSVSSLSLNQIGNEQEKSSSGGGGLMSK 161
Query: 253 RNRKPPEPYNG 221
RK + NG
Sbjct: 162 MKRKITQAKNG 172
>AC006750-1|AAF60535.1| 527|Caenorhabditis elegans Hypothetical
protein Y39F10B.1a protein.
Length = 527
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/71 (19%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = -1
Query: 430 ELNWIFMEYACGGDAVSSILPLSILYGRQKPVLPISTCSLN-CCRQSKNATIAASNLVSQ 254
+ NW+ ++ + + + + + +KP + +S+ SLN + + ++ L+S+
Sbjct: 151 QTNWLRLKKKTNDEKYRGEVQIKLEFNYEKPSMSVSSLSLNQIGNEQEKSSSGGGGLMSK 210
Query: 253 RNRKPPEPYNG 221
RK + NG
Sbjct: 211 MKRKITQAKNG 221
>U46671-4|AAA85749.1| 429|Caenorhabditis elegans Hypothetical
protein C14E2.4 protein.
Length = 429
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 414 KIQFNSEEHWTKALKYMLTNLKWALTWISSQ 506
K QF EE W M N W TW SS+
Sbjct: 38 KPQFVGEEFWPVEATQMCDNEDWDTTWQSSE 68
>U97189-9|AAC48161.1| 263|Caenorhabditis elegans Hypothetical
protein C48B6.9 protein.
Length = 263
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +2
Query: 245 PVSLGYQIRCGNGRIFRLPATVQGASG 325
P+S+ Y + CG G+ T GA G
Sbjct: 28 PISMRYSVSCGGGKGIGTTGTYSGAGG 54
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical
protein F40H6.5 protein.
Length = 1288
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 84 INAAWGQTVLLLSSLARKINFNFQRYKLVPY--GNHSYIEVLEDQKVLPLYGSGGF 245
IN W ++ ++ + K ++N++ Y P+ G + V+ +YG+G F
Sbjct: 654 INMRWARSDIIYNYFWGKWDYNYETYSTRPFSRGLPHVLSVVRGSNYYDVYGNGQF 709
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,035,197
Number of Sequences: 27780
Number of extensions: 328497
Number of successful extensions: 842
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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