Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24h16
(620 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0217 + 1848970-1849251,1849419-1849566,1849638-1849789,185... 54 7e-08
09_04_0738 - 19828852-19828892,19830033-19830156,19830515-198307... 36 0.020
02_04_0130 + 20025414-20025531,20026357-20026585,20026909-200270... 34 0.079
02_05_1317 - 35683659-35683756,35683904-35683966,35684068-356841... 33 0.14
09_04_0020 + 13837257-13837281,13837364-13837550,13837655-138377... 33 0.24
03_02_0896 - 12233706-12233801,12234005-12234181,12234741-122348... 32 0.32
02_05_1316 - 35679456-35679538,35679660-35679722,35679824-356799... 31 0.56
02_04_0217 + 20992238-20992397,20992488-20992792,20992910-209930... 30 1.7
12_02_0029 - 12459565-12459804,12460013-12460121,12460507-124605... 29 2.3
07_03_0293 + 16321539-16321893,16322020-16322207,16322881-163229... 29 3.9
12_01_1041 - 10711362-10711428,10711571-10712262,10712622-107127... 28 5.2
11_03_0188 - 11338013-11338976,11339843-11340183 28 5.2
09_02_0615 - 11251869-11252832,11253699-11254039 28 5.2
06_03_1379 - 29709532-29709843,29709951-29710112,29710193-297110... 28 5.2
06_03_0490 - 21375400-21376363,21377230-21377570 28 5.2
06_02_0143 - 12266120-12267083,12267950-12268290 28 5.2
06_02_0141 + 12259098-12259438,12260305-12261268 28 5.2
02_04_0118 + 19924184-19924524,19925391-19926354 28 5.2
07_03_0376 + 17437308-17437536,17438049-17438149,17438246-174384... 27 9.1
01_06_1642 + 38857326-38857581,38858577-38858818,38859001-388600... 27 9.1
>01_01_0217 +
1848970-1849251,1849419-1849566,1849638-1849789,
1850146-1850328,1850690-1850765,1850956-1851033,
1851584-1851669,1852680-1852753,1852920-1852965,
1853211-1853320,1853600-1853774,1854501-1854749
Length = 552
Score = 54.4 bits (125), Expect = 7e-08
Identities = 35/138 (25%), Positives = 67/138 (48%), Gaps = 5/138 (3%)
Frame = +2
Query: 197 LSDVVNSEKANIEHIVLTHWHHDHVGGVENIYKTIAKNPIIWKHKKSSEDSADNELPASI 376
L+++VNS + +++TH HHDHV G+ ++ + + ++ HK + SI
Sbjct: 256 LAELVNSLPKKLV-VLVTHHHHDHVDGL-SVVQRCNPDAVLLTHKNTMSRIGKGNW--SI 311
Query: 377 PIEWLRDGQEIKVEGATVKVHHTPGHTTDHIVLTCLEENILFSGDCILGEGTAVFE---- 544
+ G+ I + ++V PGHT H+ + + N L GD +G+G+A +
Sbjct: 312 GYTAVAGGENICIGDQQLQVVFAPGHTDGHMGVLHVNTNALIVGDHCVGQGSATLDNRAG 371
Query: 545 -DLYTYMKSLQKILDLKP 595
++ Y ++ LD+ P
Sbjct: 372 GNMKDYFQTTYNFLDMSP 389
>09_04_0738 -
19828852-19828892,19830033-19830156,19830515-19830718,
19831505-19831690,19832098-19832172
Length = 209
Score = 36.3 bits (80), Expect = 0.020
Identities = 34/106 (32%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Frame = +2
Query: 155 VDTGDNNI--PEYQKHLSDVVNSEKANIEHIVLTHWHHDHVGG-VENIYKTIAKNPIIWK 325
VDTG + P + + + N+ +I+ TH H+DH GG +E K AK +I
Sbjct: 102 VDTGTVGVVDPSEATPIINALEKRNQNLTYILNTHHHYDHTGGNLELKAKYGAK--VIGS 159
Query: 326 HKKSSEDSADNELPASIPIEWLRDGQEIKVEGATVKVHHTPGHTTD 463
K D + I I L +G G V V TPGHT+D
Sbjct: 160 AK-------DRDRIPGIDIT-LSEGDTWMFAGHQVLVMETPGHTSD 197
>02_04_0130 +
20025414-20025531,20026357-20026585,20026909-20027032,
20027441-20027497,20027613-20027804,20027882-20027959,
20028437-20028619,20028715-20028795,20029196-20029228,
20029448-20029513,20029591-20029683,20030106-20030231,
20030395-20030508,20030973-20031068,20031159-20031256,
20031416-20031831,20032025-20032473,20032810-20032905
Length = 882
Score = 34.3 bits (75), Expect = 0.079
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Frame = +2
Query: 110 GTNTYLIGSGKNRILVDTGDNNIPEY-----QKHLSDVVNSEKAN--IEHIVLTHWHHDH 268
G N L+G+ IL+D G P++ QK + D +K + IE +++TH H DH
Sbjct: 93 GMNCMLVGNYDRYILIDAGVM-FPDFDEFGVQKIIPDTTFIKKWSHKIEAVIITHGHEDH 151
Query: 269 VGGV 280
+G +
Sbjct: 152 IGAL 155
>02_05_1317 -
35683659-35683756,35683904-35683966,35684068-35684182,
35684385-35684486,35684687-35684756,35684878-35684952,
35685188-35685279,35685386-35685493,35685560-35685640,
35685728-35685771,35685858-35685984
Length = 324
Score = 33.5 bits (73), Expect = 0.14
Identities = 41/151 (27%), Positives = 62/151 (41%)
Frame = +2
Query: 110 GTNTYLIGSGKNRILVDTGDNNIPEYQKHLSDVVNSEKANIEHIVLTHWHHDHVGGVENI 289
G +YLI ILVD+ P Y L++ + E ++ LTH D V
Sbjct: 134 GATSYLITHPDGNILVDS-----PRYTTKLANNIE-ELGGARYMFLTH--RDDVADHRKW 185
Query: 290 YKTIAKNPIIWKHKKSSEDSADNELPASIPIEWLRDGQEIKVEGATVKVHHTPGHTTDHI 469
+ + II S D E A++ +E G GA ++ HTPGHT +
Sbjct: 186 AERLKCERII--------HSGDVER-ATVDVERKLTGNGPWNIGADFELIHTPGHTQGSV 236
Query: 470 VLTCLEENILFSGDCILGEGTAVFEDLYTYM 562
L LF+GD + + +DLY ++
Sbjct: 237 CLFYKPVKALFTGDHVAKSEES--DDLYLFL 265
>09_04_0020 +
13837257-13837281,13837364-13837550,13837655-13837727,
13837769-13837804,13838161-13838281,13838399-13838472,
13838594-13838730,13839262-13839325,13839693-13839758,
13840061-13840130,13840206-13840310,13840840-13840981,
13841343-13841439,13841939-13842460
Length = 572
Score = 32.7 bits (71), Expect = 0.24
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Frame = +2
Query: 131 GSGKNRILVDTG-------DNNIPEYQKHLSDVVNSEKANIEHIVLTHWHHDHVGGV 280
G GK R++ D G P++ + L+D A I +V+TH+H DH+G +
Sbjct: 24 GGGK-RVMFDCGMHMGHRDSRRYPDFDRLLADGAADYTAAISCVVITHFHLDHIGAL 79
>03_02_0896 -
12233706-12233801,12234005-12234181,12234741-12234854,
12234928-12235006,12235372-12235533,12235957-12236079,
12236139-12236218
Length = 276
Score = 32.3 bits (70), Expect = 0.32
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Frame = +2
Query: 230 IEHIVLTHWHHDHVGGVENIYKTIAKNPIIWKHKKSSEDSADNELPASIPIEWLRDGQEI 409
I+ ++ TH H DH GG E + +++ P I K S DN + +E +G ++
Sbjct: 58 IDCVLTTHHHWDHAGGNEKMAQSV---PGI----KVYGGSLDNVKGCTDQVE---NGTKL 107
Query: 410 KV-EGATVKVHHTPGHTTDHI--VLTCLEEN--ILFSGDCILGEGTAVF 541
+ + + HTP HT HI +T EE +F+GD + G F
Sbjct: 108 SLGKDIEILCLHTPCHTKGHISYYVTSKEEEDPAVFTGDTLFIAGCGRF 156
>02_05_1316 -
35679456-35679538,35679660-35679722,35679824-35679938,
35680271-35680372,35680667-35680736,35681182-35681273,
35681542-35681622,35681697-35681740,35681829-35681976
Length = 265
Score = 31.5 bits (68), Expect = 0.56
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +2
Query: 380 IEWLRDGQEIKVEGATVKVHHTPGHTTDHIVLTCLEENILFSGD 511
+EW G GA ++ HTPGHT + L LF+GD
Sbjct: 153 VEWKLTGNGPWDIGADFELIHTPGHTEGSVCLFYKPVKALFTGD 196
>02_04_0217 +
20992238-20992397,20992488-20992792,20992910-20993038,
20993476-20993631
Length = 249
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = -1
Query: 278 HHQHGHGASE*EQYVLC*LFQS---SQHLINVSGTRVYCCLQCQLRFDFY 138
H + GH + E +VLC +F+S SQ + GT + C + L D Y
Sbjct: 147 HRKRGHSSMESNNWVLCRVFESSCGSQVSFHGEGTELSCLDEVFLSLDDY 196
>12_02_0029 -
12459565-12459804,12460013-12460121,12460507-12460599,
12460965-12461208,12462302-12462338
Length = 240
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +2
Query: 110 GTNTYLIGSGKNRILVDTGDNNIPEYQKHLSDVVNSEKANIEHIVLTHWHHDHV 271
GT +L G+N + D ++ E QK++ + + V+ W+HDHV
Sbjct: 91 GTRWFL---GRNSVEQRGDDPSVHEQQKNMGRWYMQRRTTMTCFVICKWNHDHV 141
>07_03_0293 +
16321539-16321893,16322020-16322207,16322881-16322904,
16323497-16323550,16323854-16323944,16324715-16324815,
16324949-16324999,16326626-16326754,16327772-16327834,
16327928-16328171,16329628-16329776,16329855-16329944,
16330343-16330477,16330579-16330635,16331079-16331135,
16332299-16332336,16332532-16332601,16332971-16333207
Length = 710
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -3
Query: 189 WYSGILLSPVSTKIRFLPEPMRYVFVP*RVIGPGLQ-PR 76
W + +LLSP ++ P P R + P + GPG Q PR
Sbjct: 6 WSTRLLLSPSASASSHRPNPTRRLAFPSPISGPGRQAPR 44
>12_01_1041 -
10711362-10711428,10711571-10712262,10712622-10712777,
10712885-10713957,10714422-10714524,10714694-10714876,
10715007-10715099,10715379-10715564,10716530-10716793
Length = 938
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 422 ATVKVHHTPGHTTDHIVLTCLEENILFSGDCILGEGTA 535
+T V H HT D + C + +L SG CI+ G A
Sbjct: 564 STGDVSHK-SHTEDQVNAVCQKNVVLSSGTCIISNGFA 600
>11_03_0188 - 11338013-11338976,11339843-11340183
Length = 434
Score = 28.3 bits (60), Expect = 5.2
Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Frame = +2
Query: 83 CNPGPMTLQGTNTYLIGSGKNRILV-----DTGDNNIPEYQKHLSDVVNSEKANIEHIVL 247
C P P +G N +L+G N + NN + H D +N A L
Sbjct: 129 CLPQPQ--EGENFHLVGQTTNTMSTPPPTPQAAANNTVQIDIH-EDAINDASAKKRS--L 183
Query: 248 THWHHDHVGGVENIYKTIAKNPIIWKHKK 334
+W HD + + + +K+PI KK
Sbjct: 184 RYWTHDEEERLASAWLNASKDPIHGNEKK 212
>09_02_0615 - 11251869-11252832,11253699-11254039
Length = 434
Score = 28.3 bits (60), Expect = 5.2
Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Frame = +2
Query: 83 CNPGPMTLQGTNTYLIGSGKNRILV-----DTGDNNIPEYQKHLSDVVNSEKANIEHIVL 247
C P P +G N +L+G N + NN + H D +N A L
Sbjct: 129 CLPQPQ--EGENFHLVGQTTNTMSTPPPTPQAAANNTVQIDIH-EDAINDASAKKRS--L 183
Query: 248 THWHHDHVGGVENIYKTIAKNPIIWKHKK 334
+W HD + + + +K+PI KK
Sbjct: 184 RYWTHDEEERLASAWLNASKDPIHGNEKK 212
>06_03_1379 -
29709532-29709843,29709951-29710112,29710193-29711086,
29712741-29712812,29714106-29714210,29714820-29714900
Length = 541
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 136 GTNEIRVCALKSHWTWITTENPKTLNL*KF*IPSVSLVD 20
G ++++ L H TW+ +N K L IPSVS V+
Sbjct: 328 GCSKLQKATLNFHQTWLEEDNNKVLGHVFHGIPSVSAVE 366
>06_03_0490 - 21375400-21376363,21377230-21377570
Length = 434
Score = 28.3 bits (60), Expect = 5.2
Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Frame = +2
Query: 83 CNPGPMTLQGTNTYLIGSGKNRILV-----DTGDNNIPEYQKHLSDVVNSEKANIEHIVL 247
C P P +G N +L+G N + NN + H D +N A L
Sbjct: 129 CLPQPQ--EGENFHLVGQTTNTMSTPPPTPQAAANNTVQIDIH-EDAINDASAKKRS--L 183
Query: 248 THWHHDHVGGVENIYKTIAKNPIIWKHKK 334
+W HD + + + +K+PI KK
Sbjct: 184 RYWTHDEEERLASAWLNASKDPIHGNEKK 212
>06_02_0143 - 12266120-12267083,12267950-12268290
Length = 434
Score = 28.3 bits (60), Expect = 5.2
Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Frame = +2
Query: 83 CNPGPMTLQGTNTYLIGSGKNRILV-----DTGDNNIPEYQKHLSDVVNSEKANIEHIVL 247
C P P +G N +L+G N + NN + H D +N A L
Sbjct: 129 CLPQPQ--EGENFHLVGQTTNTMSTPPPTPQAAANNTVQIDIH-EDAINDASAKKRS--L 183
Query: 248 THWHHDHVGGVENIYKTIAKNPIIWKHKK 334
+W HD + + + +K+PI KK
Sbjct: 184 RYWTHDEEERLASAWLNASKDPIHGNEKK 212
>06_02_0141 + 12259098-12259438,12260305-12261268
Length = 434
Score = 28.3 bits (60), Expect = 5.2
Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Frame = +2
Query: 83 CNPGPMTLQGTNTYLIGSGKNRILV-----DTGDNNIPEYQKHLSDVVNSEKANIEHIVL 247
C P P +G N +L+G N + NN + H D +N A L
Sbjct: 129 CLPQPQ--EGENFHLVGQTTNTMSTPPPTPQAAANNTVQIDIH-EDAINDASAKKRS--L 183
Query: 248 THWHHDHVGGVENIYKTIAKNPIIWKHKK 334
+W HD + + + +K+PI KK
Sbjct: 184 RYWTHDEEERLASAWLNASKDPIHGNEKK 212
>02_04_0118 + 19924184-19924524,19925391-19926354
Length = 434
Score = 28.3 bits (60), Expect = 5.2
Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Frame = +2
Query: 83 CNPGPMTLQGTNTYLIGSGKNRILV-----DTGDNNIPEYQKHLSDVVNSEKANIEHIVL 247
C P P +G N +L+G N + NN + H D +N A L
Sbjct: 129 CLPQPQ--EGENFHLVGQTTNTMSTPPPTPQAAANNTVQIDIH-EDAINDASAKKRS--L 183
Query: 248 THWHHDHVGGVENIYKTIAKNPIIWKHKK 334
+W HD + + + +K+PI KK
Sbjct: 184 RYWTHDEEERLASAWLNASKDPIHGNEKK 212
>07_03_0376 +
17437308-17437536,17438049-17438149,17438246-17438463,
17438544-17438901
Length = 301
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/27 (59%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +2
Query: 77 LGCNPG-PMTLQGTNTYLIGSGKNRIL 154
LG PG P TLQ TN Y+ GSG RI+
Sbjct: 129 LGTIPGEPYTLQ-TNVYVRGSGDGRIV 154
>01_06_1642 +
38857326-38857581,38858577-38858818,38859001-38860004,
38860170-38860587,38860673-38860789
Length = 678
Score = 27.5 bits (58), Expect = 9.1
Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 5/96 (5%)
Frame = +2
Query: 86 NPGPMTLQGTNTYLIGSGKNRILVDTGDNNIPEYQKHLSDVVNSEKANIEHIVLTHWHHD 265
NP + + G T G K+ + + + EY+ L DV+ S K +HD
Sbjct: 74 NPALVLITGDLTD--GKSKDLLTMKQNEMEWIEYRSKLKDVIESSKLPRSIFYDLRGNHD 131
Query: 266 HV-----GGVENIYKTIAKNPIIWKHKKSSEDSADN 358
GG + Y+ + N I+ +H + + +N
Sbjct: 132 SFGVPSPGGDHDFYQKYSINAILRRHSRVQSITLEN 167
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,664,131
Number of Sequences: 37544
Number of extensions: 350981
Number of successful extensions: 855
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 851
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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