SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24h16
         (620 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC000878-1|AAH00878.1|  288|Homo sapiens lactamase, beta 2 protein.   193   4e-49
AK222699-1|BAD96419.1|  288|Homo sapiens lactamase, beta 2 varia...   193   4e-49
AF151841-1|AAD34078.1|  288|Homo sapiens CGI-83 protein protein.      193   4e-49
BC038230-1|AAH38230.1|  279|Homo sapiens similar to metallo-beta...    36   0.12 
BC033796-1|AAH33796.1|  290|Homo sapiens hydroxyacylglutathione ...    36   0.12 
BC004353-1|AAH04353.1|  282|Homo sapiens hydroxyacylglutathione ...    36   0.12 
AE006464-18|AAK61250.1|  218|Homo sapiens similar to HAGH protein.     36   0.12 
AB209331-1|BAD92568.1|  234|Homo sapiens hydroxyacylglutathione ...    36   0.12 
D83198-1|BAA34595.2|  254|Homo sapiens HSCO protein.                   33   0.62 
CR457261-1|CAG33542.1|  826|Homo sapiens ELAC2 protein.                33   0.62 
BC008250-1|AAH08250.1|  254|Homo sapiens ethylmalonic encephalop...    33   0.62 
BC004158-1|AAH04158.1|  826|Homo sapiens elaC homolog 2 (E. coli...    33   0.62 
BC001939-1|AAH01939.1|  826|Homo sapiens elaC homolog 2 (E. coli...    33   0.62 
AK124838-1|BAC85964.1|  454|Homo sapiens protein ( Homo sapiens ...    33   0.62 
AK001392-1|BAA91666.1|  854|Homo sapiens protein ( Homo sapiens ...    33   0.62 
AF304370-1|AAG24441.1|  826|Homo sapiens putative prostate cance...    33   0.62 
AC018758-2|AAG09063.1|  227|Homo sapiens protein expressed in th...    33   0.62 
AK054841-1|BAB70814.1|  202|Homo sapiens protein ( Homo sapiens ...    31   2.5  
AK125030-1|BAC86026.1|  501|Homo sapiens protein ( Homo sapiens ...    31   3.3  

>BC000878-1|AAH00878.1|  288|Homo sapiens lactamase, beta 2 protein.
          Length = 288

 Score =  193 bits (471), Expect = 4e-49
 Identities = 93/176 (52%), Positives = 120/176 (68%), Gaps = 2/176 (1%)
 Frame = +2

Query: 71  RILGCNPGPMTLQGTNTYLIGSGKNRILVDTGDNNIPEYQKHLSDVVNSEKANIEHIVLT 250
           R+LGCNPGPMTLQGTNTYL+G+G  RIL+DTG+  IPEY   L   +      I+ IV+T
Sbjct: 17  RVLGCNPGPMTLQGTNTYLVGTGPRRILIDTGEPAIPEYISCLKQALTEFNTAIQEIVVT 76

Query: 251 HWHHDHVGGVENIYKTIAKNPIIWKHKKSSEDSADNELPASIPIE--WLRDGQEIKVEGA 424
           HWH DH GG+ +I K+I  N   +  KK   +    E+  +   +  +L+DG  IK EGA
Sbjct: 77  HWHRDHSGGIGDICKSI-NNDTTYCIKKLPRNPQREEIIGNGEQQYVYLKDGDVIKTEGA 135

Query: 425 TVKVHHTPGHTTDHIVLTCLEENILFSGDCILGEGTAVFEDLYTYMKSLQKILDLK 592
           T++V +TPGHT DH+ L   EEN +FSGDCILGEGT VFEDLY YM SL+++L +K
Sbjct: 136 TLRVLYTPGHTDDHMALLLEEENAIFSGDCILGEGTTVFEDLYDYMNSLKELLKIK 191


>AK222699-1|BAD96419.1|  288|Homo sapiens lactamase, beta 2 variant
           protein.
          Length = 288

 Score =  193 bits (471), Expect = 4e-49
 Identities = 93/176 (52%), Positives = 120/176 (68%), Gaps = 2/176 (1%)
 Frame = +2

Query: 71  RILGCNPGPMTLQGTNTYLIGSGKNRILVDTGDNNIPEYQKHLSDVVNSEKANIEHIVLT 250
           R+LGCNPGPMTLQGTNTYL+G+G  RIL+DTG+  IPEY   L   +      I+ IV+T
Sbjct: 17  RVLGCNPGPMTLQGTNTYLVGTGPRRILIDTGEPAIPEYISCLKQALTEFNTAIQEIVVT 76

Query: 251 HWHHDHVGGVENIYKTIAKNPIIWKHKKSSEDSADNELPASIPIE--WLRDGQEIKVEGA 424
           HWH DH GG+ +I K+I  N   +  KK   +    E+  +   +  +L+DG  IK EGA
Sbjct: 77  HWHRDHSGGIGDICKSI-NNDTTYCIKKLPRNPQREEIIGNGEQQYVYLKDGDVIKTEGA 135

Query: 425 TVKVHHTPGHTTDHIVLTCLEENILFSGDCILGEGTAVFEDLYTYMKSLQKILDLK 592
           T++V +TPGHT DH+ L   EEN +FSGDCILGEGT VFEDLY YM SL+++L +K
Sbjct: 136 TLRVLYTPGHTDDHMALLLEEENAIFSGDCILGEGTTVFEDLYDYMNSLKELLKIK 191


>AF151841-1|AAD34078.1|  288|Homo sapiens CGI-83 protein protein.
          Length = 288

 Score =  193 bits (471), Expect = 4e-49
 Identities = 93/176 (52%), Positives = 120/176 (68%), Gaps = 2/176 (1%)
 Frame = +2

Query: 71  RILGCNPGPMTLQGTNTYLIGSGKNRILVDTGDNNIPEYQKHLSDVVNSEKANIEHIVLT 250
           R+LGCNPGPMTLQGTNTYL+G+G  RIL+DTG+  IPEY   L   +      I+ IV+T
Sbjct: 17  RVLGCNPGPMTLQGTNTYLVGTGPRRILIDTGEPAIPEYISCLKQALTEFNTAIQEIVVT 76

Query: 251 HWHHDHVGGVENIYKTIAKNPIIWKHKKSSEDSADNELPASIPIE--WLRDGQEIKVEGA 424
           HWH DH GG+ +I K+I  N   +  KK   +    E+  +   +  +L+DG  IK EGA
Sbjct: 77  HWHRDHSGGIGDICKSI-NNDTTYCIKKLPRNPQREEIIGNGEQQYVYLKDGDVIKTEGA 135

Query: 425 TVKVHHTPGHTTDHIVLTCLEENILFSGDCILGEGTAVFEDLYTYMKSLQKILDLK 592
           T++V +TPGHT DH+ L   EEN +FSGDCILGEGT VFEDLY YM SL+++L +K
Sbjct: 136 TLRVLYTPGHTDDHMALLLEEENAIFSGDCILGEGTTVFEDLYDYMNSLKELLKIK 191


>BC038230-1|AAH38230.1|  279|Homo sapiens similar to
           metallo-beta-lactamase superfamily protein protein.
          Length = 279

 Score = 35.9 bits (79), Expect = 0.12
 Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
 Frame = +2

Query: 389 LRDGQEIKVEGATVKVHHTPGHTTDHIVLTCLEENILFSGDCILGEGTAV----FEDLYT 556
           L+DG  I +    + V H PGH+   I L   +  ILFSGD ++ +G+ +    +  +  
Sbjct: 149 LQDGDVINLGDRQLTVMHMPGHSRGSICLHDKDRKILFSGD-VVYDGSLIDWLPYSRISD 207

Query: 557 YMKSLQKILDL 589
           Y+ + +++++L
Sbjct: 208 YVGTCERLIEL 218


>BC033796-1|AAH33796.1|  290|Homo sapiens hydroxyacylglutathione
           hydrolase-like protein.
          Length = 290

 Score = 35.9 bits (79), Expect = 0.12
 Identities = 36/142 (25%), Positives = 59/142 (41%), Gaps = 7/142 (4%)
 Frame = +2

Query: 191 KHLSDVVNSEKANIEHIVLTHWHHDHVGGVENIYKTIAKNPIIWKHKKSSEDSADNELPA 370
           K L ++V  E  ++  ++ TH H DH  G          NP + + +        +E   
Sbjct: 34  KRLLEIVGREGVSLTAVLTTHHHWDHARG----------NPELARLRPGLAVLGADERIF 83

Query: 371 SIPIEWLRDGQEIKVEGATVKVHHTPGHTTDHIVL-----TCLEENILFSGDC--ILGEG 529
           S+    L  G+E++     V+   TPGHT  H+        C +   LFSGD   + G G
Sbjct: 84  SLTRR-LAHGEELRFGAIHVRCLLTPGHTAGHMSYFLWEDDCPDPPALFSGDALSVAGCG 142

Query: 530 TAVFEDLYTYMKSLQKILDLKP 595
           + +        +SL ++  L P
Sbjct: 143 SCLEGSAQQMYQSLAELGTLPP 164


>BC004353-1|AAH04353.1|  282|Homo sapiens hydroxyacylglutathione
           hydrolase-like protein.
          Length = 282

 Score = 35.9 bits (79), Expect = 0.12
 Identities = 36/142 (25%), Positives = 59/142 (41%), Gaps = 7/142 (4%)
 Frame = +2

Query: 191 KHLSDVVNSEKANIEHIVLTHWHHDHVGGVENIYKTIAKNPIIWKHKKSSEDSADNELPA 370
           K L ++V  E  ++  ++ TH H DH  G          NP + + +        +E   
Sbjct: 34  KRLLEIVGREGVSLTAVLTTHHHWDHARG----------NPELARLRPGLAVLGADERIF 83

Query: 371 SIPIEWLRDGQEIKVEGATVKVHHTPGHTTDHIVL-----TCLEENILFSGDC--ILGEG 529
           S+    L  G+E++     V+   TPGHT  H+        C +   LFSGD   + G G
Sbjct: 84  SLTRR-LAHGEELRFGAIHVRCLLTPGHTAGHMSYFLWEDDCPDPPALFSGDALSVAGCG 142

Query: 530 TAVFEDLYTYMKSLQKILDLKP 595
           + +        +SL ++  L P
Sbjct: 143 SCLEGSAQQMYQSLAELGTLPP 164


>AE006464-18|AAK61250.1|  218|Homo sapiens similar to HAGH protein.
          Length = 218

 Score = 35.9 bits (79), Expect = 0.12
 Identities = 36/142 (25%), Positives = 59/142 (41%), Gaps = 7/142 (4%)
 Frame = +2

Query: 191 KHLSDVVNSEKANIEHIVLTHWHHDHVGGVENIYKTIAKNPIIWKHKKSSEDSADNELPA 370
           K L ++V  E  ++  ++ TH H DH  G          NP + + +        +E   
Sbjct: 34  KRLLEIVGREGVSLTAVLTTHHHWDHARG----------NPELARLRPGLAVLGADERIF 83

Query: 371 SIPIEWLRDGQEIKVEGATVKVHHTPGHTTDHIVL-----TCLEENILFSGDC--ILGEG 529
           S+    L  G+E++     V+   TPGHT  H+        C +   LFSGD   + G G
Sbjct: 84  SLTRR-LAHGEELRFGAIHVRCLLTPGHTAGHMSYFLWEDDCPDPPALFSGDALSVAGCG 142

Query: 530 TAVFEDLYTYMKSLQKILDLKP 595
           + +        +SL ++  L P
Sbjct: 143 SCLEGSAQQMYQSLAELGTLPP 164


>AB209331-1|BAD92568.1|  234|Homo sapiens hydroxyacylglutathione
           hydrolase-like isoform 1 variant protein.
          Length = 234

 Score = 35.9 bits (79), Expect = 0.12
 Identities = 36/142 (25%), Positives = 59/142 (41%), Gaps = 7/142 (4%)
 Frame = +2

Query: 191 KHLSDVVNSEKANIEHIVLTHWHHDHVGGVENIYKTIAKNPIIWKHKKSSEDSADNELPA 370
           K L ++V  E  ++  ++ TH H DH  G          NP + + +        +E   
Sbjct: 73  KRLLEIVGREGVSLTAVLTTHHHWDHARG----------NPELARLRPGLAVLGADERIF 122

Query: 371 SIPIEWLRDGQEIKVEGATVKVHHTPGHTTDHIVL-----TCLEENILFSGDC--ILGEG 529
           S+    L  G+E++     V+   TPGHT  H+        C +   LFSGD   + G G
Sbjct: 123 SLTRR-LAHGEELRFGAIHVRCLLTPGHTAGHMSYFLWEDDCPDPPALFSGDALSVAGCG 181

Query: 530 TAVFEDLYTYMKSLQKILDLKP 595
           + +        +SL ++  L P
Sbjct: 182 SCLEGSAQQMYQSLAELGTLPP 203


>D83198-1|BAA34595.2|  254|Homo sapiens HSCO protein.
          Length = 254

 Score = 33.5 bits (73), Expect = 0.62
 Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
 Frame = +2

Query: 113 TNTYLIGSGKNR--ILVDTGDNNIPEYQKHLSDVVNSEKANIEHIVLTHWHHDHVGGVEN 286
           T TYL+G  ++R  +L+D     + E     + ++      + + V TH H DH+ G   
Sbjct: 35  TFTYLLGDRESREAVLIDP----VLETAPRDAQLIKELGLRLLYAVNTHCHADHITG-SG 89

Query: 287 IYKTIAKNPIIWKHKKSSEDSADNELPASIPIEWLRDGQEIKVEGATVKVHHTPGHTTDH 466
           + +++            S  S  +   A + IE   DG  I+     ++   +PGHT   
Sbjct: 90  LLRSLLPGC-------QSVISRLSGAQADLHIE---DGDSIRFGRFALETRASPGHTPGC 139

Query: 467 IVLTCLEENILFSGDCILGEG 529
           +     + ++ F+GD +L  G
Sbjct: 140 VTFVLNDHSMAFTGDALLIRG 160


>CR457261-1|CAG33542.1|  826|Homo sapiens ELAC2 protein.
          Length = 826

 Score = 33.5 bits (73), Expect = 0.62
 Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +2

Query: 95  PMTLQGTNTYLIG-SGKNRILVDTGDNNIPEYQKHLSDVVNSEKANIEHIVLTHWHHDHV 271
           PM ++  +  L+  S    +L+D G+    +  +H  D V+     +  + ++H H DH 
Sbjct: 493 PMKIRNVSATLVNISPDTSLLLDCGEGTFGQLCRHYGDQVDRVLGTLAAVFVSHLHADHH 552

Query: 272 GGVENI 289
            G+ +I
Sbjct: 553 TGLPSI 558


>BC008250-1|AAH08250.1|  254|Homo sapiens ethylmalonic
           encephalopathy 1 protein.
          Length = 254

 Score = 33.5 bits (73), Expect = 0.62
 Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
 Frame = +2

Query: 113 TNTYLIGSGKNR--ILVDTGDNNIPEYQKHLSDVVNSEKANIEHIVLTHWHHDHVGGVEN 286
           T TYL+G  ++R  +L+D     + E     + ++      + + V TH H DH+ G   
Sbjct: 35  TFTYLLGDRESREAVLIDP----VLETAPRDAQLIKELGLRLLYAVNTHCHADHITG-SG 89

Query: 287 IYKTIAKNPIIWKHKKSSEDSADNELPASIPIEWLRDGQEIKVEGATVKVHHTPGHTTDH 466
           + +++            S  S  +   A + IE   DG  I+     ++   +PGHT   
Sbjct: 90  LLRSLLPGC-------QSVISRLSGAQADLHIE---DGDSIRFGRFALETRASPGHTPGC 139

Query: 467 IVLTCLEENILFSGDCILGEG 529
           +     + ++ F+GD +L  G
Sbjct: 140 VTFVLNDHSMAFTGDALLIRG 160


>BC004158-1|AAH04158.1|  826|Homo sapiens elaC homolog 2 (E. coli)
           protein.
          Length = 826

 Score = 33.5 bits (73), Expect = 0.62
 Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +2

Query: 95  PMTLQGTNTYLIG-SGKNRILVDTGDNNIPEYQKHLSDVVNSEKANIEHIVLTHWHHDHV 271
           PM ++  +  L+  S    +L+D G+    +  +H  D V+     +  + ++H H DH 
Sbjct: 493 PMKIRNVSATLVNISPDTSLLLDCGEGTFGQLCRHYGDQVDRVLGTLAAVFVSHLHADHH 552

Query: 272 GGVENI 289
            G+ +I
Sbjct: 553 TGLPSI 558


>BC001939-1|AAH01939.1|  826|Homo sapiens elaC homolog 2 (E. coli)
           protein.
          Length = 826

 Score = 33.5 bits (73), Expect = 0.62
 Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +2

Query: 95  PMTLQGTNTYLIG-SGKNRILVDTGDNNIPEYQKHLSDVVNSEKANIEHIVLTHWHHDHV 271
           PM ++  +  L+  S    +L+D G+    +  +H  D V+     +  + ++H H DH 
Sbjct: 493 PMKIRNVSATLVNISPDTSLLLDCGEGTFGQLCRHYGDQVDRVLGTLAAVFVSHLHADHH 552

Query: 272 GGVENI 289
            G+ +I
Sbjct: 553 TGLPSI 558


>AK124838-1|BAC85964.1|  454|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42848 fis, clone BRHIP2004359, weakly  similar
           to ELAC PROTEIN. ).
          Length = 454

 Score = 33.5 bits (73), Expect = 0.62
 Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +2

Query: 95  PMTLQGTNTYLIG-SGKNRILVDTGDNNIPEYQKHLSDVVNSEKANIEHIVLTHWHHDHV 271
           PM ++  +  L+  S    +L+D G+    +  +H  D V+     +  + ++H H DH 
Sbjct: 121 PMKIRNVSATLVNISPDTSLLLDCGEGTFGQLCRHYGDQVDRVLGTLAAVFVSHLHADHH 180

Query: 272 GGVENI 289
            G+ +I
Sbjct: 181 TGLPSI 186


>AK001392-1|BAA91666.1|  854|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10530 fis, clone NT2RP2000985. ).
          Length = 854

 Score = 33.5 bits (73), Expect = 0.62
 Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +2

Query: 95  PMTLQGTNTYLIG-SGKNRILVDTGDNNIPEYQKHLSDVVNSEKANIEHIVLTHWHHDHV 271
           PM ++  +  L+  S    +L+D G+    +  +H  D V+     +  + ++H H DH 
Sbjct: 492 PMKIRNVSATLVNISPDTSLLLDCGEGTFGQLCRHYGDQVDRVLGTLAAVFVSHLHADHH 551

Query: 272 GGVENI 289
            G+ +I
Sbjct: 552 TGLPSI 557


>AF304370-1|AAG24441.1|  826|Homo sapiens putative prostate cancer
           susceptibility protein HPC2/ELAC2 protein.
          Length = 826

 Score = 33.5 bits (73), Expect = 0.62
 Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +2

Query: 95  PMTLQGTNTYLIG-SGKNRILVDTGDNNIPEYQKHLSDVVNSEKANIEHIVLTHWHHDHV 271
           PM ++  +  L+  S    +L+D G+    +  +H  D V+     +  + ++H H DH 
Sbjct: 493 PMKIRNVSATLVNISPDTSLLLDCGEGTFGQLCRHYGDQVDRVLGTLAAVFVSHLHADHH 552

Query: 272 GGVENI 289
            G+ +I
Sbjct: 553 TGLPSI 558


>AC018758-2|AAG09063.1|  227|Homo sapiens protein expressed in
           thyroid protein.
          Length = 227

 Score = 33.5 bits (73), Expect = 0.62
 Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
 Frame = +2

Query: 113 TNTYLIGSGKNR--ILVDTGDNNIPEYQKHLSDVVNSEKANIEHIVLTHWHHDHVGGVEN 286
           T TYL+G  ++R  +L+D     + E     + ++      + + V TH H DH+ G   
Sbjct: 8   TFTYLLGDRESREAVLIDP----VLETAPRDAQLIKELGLRLLYAVNTHCHADHITG-SG 62

Query: 287 IYKTIAKNPIIWKHKKSSEDSADNELPASIPIEWLRDGQEIKVEGATVKVHHTPGHTTDH 466
           + +++            S  S  +   A + IE   DG  I+     ++   +PGHT   
Sbjct: 63  LLRSLLPGC-------QSVISRLSGAQADLHIE---DGDSIRFGRFALETRASPGHTPGC 112

Query: 467 IVLTCLEENILFSGDCILGEG 529
           +     + ++ F+GD +L  G
Sbjct: 113 VTFVLNDHSMAFTGDALLIRG 133


>AK054841-1|BAB70814.1|  202|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30279 fis, clone BRACE2002772, moderately
           similar to HYDROXYACYLGLUTATHIONE HYDROLASE (EC
           3.1.2.6). ).
          Length = 202

 Score = 31.5 bits (68), Expect = 2.5
 Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 5/111 (4%)
 Frame = +2

Query: 191 KHLSDVVNSEKANIEHIVLTHWHHDHVGGVENIYKTIAKNPIIWKHKKSSEDSADNELPA 370
           K L ++V  E  ++  ++ TH H DH  G          NP + + +        +E   
Sbjct: 34  KRLLEIVGREGVSLTAVLTTHHHWDHARG----------NPELARLRPGLAVLGADERIF 83

Query: 371 SIPIEWLRDGQEIKVEGATVKVHHTPGHTTDHIVL-----TCLEENILFSG 508
           S+    L  G+E++     V+   TPGHT  H+        C +   LFSG
Sbjct: 84  SL-TRRLAHGEELRFGAIHVRCLLTPGHTAGHMSYFLWEDDCPDPPALFSG 133


>AK125030-1|BAC86026.1|  501|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43040 fis, clone BRTHA3003074, highly  similar
           to Homo sapiens prostate cancer susceptibility protein.
           ).
          Length = 501

 Score = 31.1 bits (67), Expect = 3.3
 Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +2

Query: 95  PMTLQGTNTYLIG-SGKNRILVDTGDNNIPEYQKHLSDVVNSEKANIEHIVLTHWHHDH 268
           PM ++  +  L+  S    +L+D G+    +  +H  D V+     +  + ++H H DH
Sbjct: 399 PMKIRNVSATLVNISPDTSLLLDCGEGTFGQLCRHYGDQVDRVLGTLAAVFVSHLHADH 457


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,596,985
Number of Sequences: 237096
Number of extensions: 2071440
Number of successful extensions: 7771
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 7455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7768
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -