Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24h16
(620 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132949-40|CAN99706.1| 329|Caenorhabditis elegans Hypothetical... 192 2e-49
AL132949-39|CAB61094.1| 295|Caenorhabditis elegans Hypothetical... 192 2e-49
Z73423-2|CAA97774.1| 290|Caenorhabditis elegans Hypothetical pr... 41 6e-04
Z68493-5|CAA92800.1| 237|Caenorhabditis elegans Hypothetical pr... 39 0.003
AL023828-5|CAA19450.1| 260|Caenorhabditis elegans Hypothetical ... 36 0.018
U40953-4|AAB52649.2| 421|Caenorhabditis elegans Hypothetical pr... 36 0.023
AF038611-5|AAT27250.1| 760|Caenorhabditis elegans Homolog of el... 32 0.29
AF038611-4|AAB92042.3| 833|Caenorhabditis elegans Homolog of el... 32 0.29
Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical p... 32 0.38
Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical p... 32 0.38
U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromos... 32 0.38
AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical ... 32 0.38
Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical pr... 31 0.66
AL033514-16|CAA22103.2| 465|Caenorhabditis elegans Hypothetical... 30 1.2
U41037-1|AAA82387.1| 629|Caenorhabditis elegans Gtpase activati... 30 1.5
AF118123-1|AAD13781.1| 629|Caenorhabditis elegans GTPase activa... 30 1.5
U41544-2|AAA83184.1| 436|Caenorhabditis elegans Dehydrogenases,... 29 2.7
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 2.7
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 29 2.7
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 2.7
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 2.7
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 29 2.7
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 2.7
U88171-1|AAB42251.2| 630|Caenorhabditis elegans Hypothetical pr... 28 6.2
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 28 6.2
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 28 6.2
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 28 6.2
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 28 6.2
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 28 6.2
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 28 6.2
Z92808-4|CAD54148.1| 928|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z92808-3|CAB07268.1| 946|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z81476-15|CAD54124.1| 928|Caenorhabditis elegans Hypothetical p... 27 8.2
Z81476-14|CAB03924.1| 946|Caenorhabditis elegans Hypothetical p... 27 8.2
AL132951-1|CAC44310.2| 707|Caenorhabditis elegans Hypothetical ... 27 8.2
AF039711-2|AAB96710.1| 416|Caenorhabditis elegans Hypothetical ... 27 8.2
>AL132949-40|CAN99706.1| 329|Caenorhabditis elegans Hypothetical
protein Y53F4B.39b protein.
Length = 329
Score = 192 bits (468), Expect = 2e-49
Identities = 96/178 (53%), Positives = 120/178 (67%), Gaps = 2/178 (1%)
Frame = +2
Query: 71 RILGCNPGPMTLQGTNTYLIGSGKNRILVDTGDNNIPEYQKHLSDVVNSEKANIEHIVLT 250
RILG NPGP TLQGTNTYL+G+G +ILVDTG+ N+ EY L V+ S ++IE+IV+T
Sbjct: 53 RILGHNPGPFTLQGTNTYLLGTGAKKILVDTGEPNVTEYISALKSVLASTNSHIEYIVIT 112
Query: 251 HWHHDHVGGVENIYKTI--AKNPIIWKHKKSSEDSADNELPASIPIEWLRDGQEIKVEGA 424
HWH DHVGG++NI I K I+K K+ ++ + ++ DG E+ V+GA
Sbjct: 113 HWHGDHVGGIDNITDEILDKKKIPIYKMKRDKDEGVER-------FHYVDDGFEVAVDGA 165
Query: 425 TVKVHHTPGHTTDHIVLTCLEENILFSGDCILGEGTAVFEDLYTYMKSLQKILDLKPT 598
T+K+ TPGHT DH L EE LFSGDCILGEGT VFEDL+ YM SLQKI DL T
Sbjct: 166 TLKLIATPGHTADHFSLWLQEERALFSGDCILGEGTTVFEDLHDYMTSLQKIKDLNAT 223
>AL132949-39|CAB61094.1| 295|Caenorhabditis elegans Hypothetical
protein Y53F4B.39a protein.
Length = 295
Score = 192 bits (468), Expect = 2e-49
Identities = 96/178 (53%), Positives = 120/178 (67%), Gaps = 2/178 (1%)
Frame = +2
Query: 71 RILGCNPGPMTLQGTNTYLIGSGKNRILVDTGDNNIPEYQKHLSDVVNSEKANIEHIVLT 250
RILG NPGP TLQGTNTYL+G+G +ILVDTG+ N+ EY L V+ S ++IE+IV+T
Sbjct: 19 RILGHNPGPFTLQGTNTYLLGTGAKKILVDTGEPNVTEYISALKSVLASTNSHIEYIVIT 78
Query: 251 HWHHDHVGGVENIYKTI--AKNPIIWKHKKSSEDSADNELPASIPIEWLRDGQEIKVEGA 424
HWH DHVGG++NI I K I+K K+ ++ + ++ DG E+ V+GA
Sbjct: 79 HWHGDHVGGIDNITDEILDKKKIPIYKMKRDKDEGVER-------FHYVDDGFEVAVDGA 131
Query: 425 TVKVHHTPGHTTDHIVLTCLEENILFSGDCILGEGTAVFEDLYTYMKSLQKILDLKPT 598
T+K+ TPGHT DH L EE LFSGDCILGEGT VFEDL+ YM SLQKI DL T
Sbjct: 132 TLKLIATPGHTADHFSLWLQEERALFSGDCILGEGTTVFEDLHDYMTSLQKIKDLNAT 189
>Z73423-2|CAA97774.1| 290|Caenorhabditis elegans Hypothetical
protein C03A3.3 protein.
Length = 290
Score = 41.1 bits (92), Expect = 6e-04
Identities = 51/173 (29%), Positives = 74/173 (42%), Gaps = 23/173 (13%)
Frame = +2
Query: 134 SGKNRILVDTGDN--NIPEYQKHLSDVVNSEKANIEHIVLTHWHHDHVGGVENIYKTIAK 307
+G + +L+DTG NI Y + LS + N + +V+TH H + GG + T
Sbjct: 36 TGNDALLIDTGCGCGNIYHYLRSLSFMENMKII----VVITHNHPEQTGGNWR-FSTTGN 90
Query: 308 NPIIW---------KHK---KSSEDSADNELPASIPIEWLRDGQEIKVEGAT-----VKV 436
N + K+K + + S E+ WL DG +I + + V+V
Sbjct: 91 NGLAHLVEDLCAGRKNKYYTRLMDSSWHWEIETYKVTRWLNDGDKIILGDESHLMNIVQV 150
Query: 437 HHTPGHTTDHIVLTCLEENILFSGDCILGEGTAVFEDLYT----YMKSLQKIL 583
TPGHT D IVL N LF GD +F YT Y S++ IL
Sbjct: 151 MWTPGHTPDSIVLWYPYANRLFVGDLFYRFDDIMFTYQYTDIRQYENSVRSIL 203
>Z68493-5|CAA92800.1| 237|Caenorhabditis elegans Hypothetical
protein C33A12.7 protein.
Length = 237
Score = 39.1 bits (87), Expect = 0.003
Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Frame = +2
Query: 113 TNTYLIGSGKNRILVDTGDNNIPEYQKHLSDVVNSEKANIEHIVLTHWHHDHVGGVENIY 292
T TY+IG K V D + + + ++ ++ + + TH H DH+ G ++
Sbjct: 21 TYTYIIGCHKTGKAVII-DPVVDTVSRDIQ-IIRDLNLDLIYGLNTHVHADHITGTNSL- 77
Query: 293 KTIAKNPIIWKHKKSSEDSADNELPASIPIEWLRDGQEIKVEGATVKVHHTPGHTTDHIV 472
KT+ K SS+ + + +++ DG+ I++ G ++V TPGHT
Sbjct: 78 KTVFPT---MKSVLSSKSGGEAD-------KYVSDGEIIEIGGLKLEVRETPGHTNG--C 125
Query: 473 LTCLEENI--LFSGDCIL 520
LT +E ++ F+GD +L
Sbjct: 126 LTYVEHSLRSAFTGDALL 143
>AL023828-5|CAA19450.1| 260|Caenorhabditis elegans Hypothetical
protein Y17G7B.3 protein.
Length = 260
Score = 36.3 bits (80), Expect = 0.018
Identities = 23/94 (24%), Positives = 41/94 (43%)
Frame = +2
Query: 188 QKHLSDVVNSEKANIEHIVLTHWHHDHVGGVENIYKTIAKNPIIWKHKKSSEDSADNELP 367
++ ++ + E +I ++ TH H+DH GG E + I+ D+ +P
Sbjct: 35 EEDYKELADKENIDITAVLTTHHHYDHCGGNEGFRRQFPNVMIL---------GGDSRIP 85
Query: 368 ASIPIEWLRDGQEIKVEGATVKVHHTPGHTTDHI 469
A ++ G + G +K TP HT+ HI
Sbjct: 86 AM--DRHVKHGDMAEFAGLQIKCLSTPCHTSGHI 117
>U40953-4|AAB52649.2| 421|Caenorhabditis elegans Hypothetical
protein F53B1.6 protein.
Length = 421
Score = 35.9 bits (79), Expect = 0.023
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = +2
Query: 125 LIGSGKNRILVDTG-DNNI---PEYQKHLSDVVNSEKANIEHIVLTHWHHDHVGGVEN 286
L+ G ILVDTG NI E K L ++ A+++ +V TH H DHVGGV +
Sbjct: 241 LVKDGDKSILVDTGLGTNINARTELIKSL-EMHGLSPADVDIVVSTHGHPDHVGGVHD 297
>AF038611-5|AAT27250.1| 760|Caenorhabditis elegans Homolog of elac2
(cancer susceptibilitylocus) protein 1, isoform b
protein.
Length = 760
Score = 32.3 bits (70), Expect = 0.29
Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +2
Query: 95 PMTLQGTNTYLIGSGKNR-ILVDTGDNNIPEYQKHLS-DVVNSEKANIEHIVLTHWHHDH 268
P + YL+ + +N IL+D G+ + + D N+ +++TH H DH
Sbjct: 431 PSKYRNVTGYLVEASENSAILIDVGEGTYGQMRAVFGEDGCKQLLVNLNCVLITHAHQDH 490
Query: 269 VGGVENI 289
+ G+ I
Sbjct: 491 MNGLYTI 497
>AF038611-4|AAB92042.3| 833|Caenorhabditis elegans Homolog of elac2
(cancer susceptibilitylocus) protein 1, isoform a
protein.
Length = 833
Score = 32.3 bits (70), Expect = 0.29
Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +2
Query: 95 PMTLQGTNTYLIGSGKNR-ILVDTGDNNIPEYQKHLS-DVVNSEKANIEHIVLTHWHHDH 268
P + YL+ + +N IL+D G+ + + D N+ +++TH H DH
Sbjct: 504 PSKYRNVTGYLVEASENSAILIDVGEGTYGQMRAVFGEDGCKQLLVNLNCVLITHAHQDH 563
Query: 269 VGGVENI 289
+ G+ I
Sbjct: 564 MNGLYTI 570
>Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 31.9 bits (69), Expect = 0.38
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = +2
Query: 278 VENIYKTIAKNPIIWKHKKSSEDSADNELPASIPIEWLRDGQEIKVEGATVKVH 439
VE + KTI K+ IW+ KK D + +LP +I L+D E++ + A K++
Sbjct: 841 VEEMEKTIKKDEGIWEQKKKECDELEEKLPNAIAA--LKDA-ELEQKAAQAKLN 891
>Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 31.9 bits (69), Expect = 0.38
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = +2
Query: 278 VENIYKTIAKNPIIWKHKKSSEDSADNELPASIPIEWLRDGQEIKVEGATVKVH 439
VE + KTI K+ IW+ KK D + +LP +I L+D E++ + A K++
Sbjct: 841 VEEMEKTIKKDEGIWEQKKKECDELEEKLPNAIAA--LKDA-ELEQKAAQAKLN 891
>U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromosome
and X-chromosomeassociated MIX-1 protein protein.
Length = 1244
Score = 31.9 bits (69), Expect = 0.38
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = +2
Query: 278 VENIYKTIAKNPIIWKHKKSSEDSADNELPASIPIEWLRDGQEIKVEGATVKVH 439
VE + KTI K+ IW+ KK D + +LP +I L+D E++ + A K++
Sbjct: 841 VEEMEKTIKKDEGIWEQKKKECDELEEKLPNAIAA--LKDA-ELEQKAAQAKLN 891
>AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 31.9 bits (69), Expect = 0.38
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = +2
Query: 278 VENIYKTIAKNPIIWKHKKSSEDSADNELPASIPIEWLRDGQEIKVEGATVKVH 439
VE + KTI K+ IW+ KK D + +LP +I L+D E++ + A K++
Sbjct: 841 VEEMEKTIKKDEGIWEQKKKECDELEEKLPNAIAA--LKDA-ELEQKAAQAKLN 891
>Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical
protein F52H3.7a protein.
Length = 1245
Score = 31.1 bits (67), Expect = 0.66
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +2
Query: 359 ELPASIPIEWLRDGQEIKVEGATVKVHHTPGHTTDHIVLTCLEENILFSGDCILGEGTAV 538
E + P++ +E K E + + P HT D IV E I+F G +L +GT +
Sbjct: 150 EETVAAPLDSAAPVEEHKEESHSSEHTEAPAHTEDSIVQADPEARIVFQG--VLADGTQI 207
Query: 539 FE 544
E
Sbjct: 208 IE 209
>AL033514-16|CAA22103.2| 465|Caenorhabditis elegans Hypothetical
protein Y75B8A.16 protein.
Length = 465
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Frame = -2
Query: 433 FDCSSF---YFNFLSVSKPFYWNRCW*FIISRIF*TL-LVLPYY 314
F CS F F V P +RCW F +S I TL +V+P Y
Sbjct: 55 FSCSLFELIIFEIAGVMAPLSRSRCWTFCLSLILITLVVVIPVY 98
>U41037-1|AAA82387.1| 629|Caenorhabditis elegans Gtpase activating
protein familyprotein 1 protein.
Length = 629
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +2
Query: 470 VLTCLEENILFSGDCILGEGTAVFEDLYTYMKSLQKILDLKPTL 601
+L C +EN LF G + G +FE L TY K + I LKP +
Sbjct: 197 ILKCQDENTLFRGQSL--SGKMLFEILTTYGK-MYLITTLKPVV 237
>AF118123-1|AAD13781.1| 629|Caenorhabditis elegans GTPase
activating protein GAP-1 protein.
Length = 629
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +2
Query: 470 VLTCLEENILFSGDCILGEGTAVFEDLYTYMKSLQKILDLKPTL 601
+L C +EN LF G + G +FE L TY K + I LKP +
Sbjct: 197 ILKCQDENTLFRGQSL--SGKMLFEILTTYGK-MYLITTLKPVV 237
>U41544-2|AAA83184.1| 436|Caenorhabditis elegans Dehydrogenases,
short chain protein28 protein.
Length = 436
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +2
Query: 101 TLQGTNTYLIGSGKNRILVDTGDNNIPEYQKHLSDVVNSEKAN 229
TL+ Y+I GKN + T D +L DV N EKAN
Sbjct: 341 TLKSIVLYIITDGKNELGKFTLDFKSASPSVYLGDVKNGEKAN 383
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 29.1 bits (62), Expect = 2.7
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +2
Query: 383 EWLRDGQEIK-VEGATVKVHHTP-GHTTDHIVLTCLEENILFSGDCILGE--GTAVFEDL 550
+WL+DG+EI+ + V+ P GH T +VL + CI+ G E
Sbjct: 2919 KWLKDGKEIELIARIRVQTRTGPEGHITQELVLDNVTPEDAGKYTCIVENTAGKDTCEAT 2978
Query: 551 YTYMKSLQKILDLKPTLFTLVM 616
T ++SL+K + K F + +
Sbjct: 2979 LTVIESLEKKSEKKAPEFIVAL 3000
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 29.1 bits (62), Expect = 2.7
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +2
Query: 383 EWLRDGQEIK-VEGATVKVHHTP-GHTTDHIVLTCLEENILFSGDCILGE--GTAVFEDL 550
+WL+DG+EI+ + V+ P GH T +VL + CI+ G E
Sbjct: 2279 KWLKDGKEIELIARIRVQTRTGPEGHITQELVLDNVTPEDAGKYTCIVENTAGKDTCEAT 2338
Query: 551 YTYMKSLQKILDLKPTLFTLVM 616
T ++SL+K + K F + +
Sbjct: 2339 LTVIESLEKKSEKKAPEFIVAL 2360
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 29.1 bits (62), Expect = 2.7
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +2
Query: 383 EWLRDGQEIK-VEGATVKVHHTP-GHTTDHIVLTCLEENILFSGDCILGE--GTAVFEDL 550
+WL+DG+EI+ + V+ P GH T +VL + CI+ G E
Sbjct: 2919 KWLKDGKEIELIARIRVQTRTGPEGHITQELVLDNVTPEDAGKYTCIVENTAGKDTCEAT 2978
Query: 551 YTYMKSLQKILDLKPTLFTLVM 616
T ++SL+K + K F + +
Sbjct: 2979 LTVIESLEKKSEKKAPEFIVAL 3000
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 29.1 bits (62), Expect = 2.7
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +2
Query: 383 EWLRDGQEIK-VEGATVKVHHTP-GHTTDHIVLTCLEENILFSGDCILGE--GTAVFEDL 550
+WL+DG+EI+ + V+ P GH T +VL + CI+ G E
Sbjct: 2919 KWLKDGKEIELIARIRVQTRTGPEGHITQELVLDNVTPEDAGKYTCIVENTAGKDTCEAT 2978
Query: 551 YTYMKSLQKILDLKPTLFTLVM 616
T ++SL+K + K F + +
Sbjct: 2979 LTVIESLEKKSEKKAPEFIVAL 3000
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 29.1 bits (62), Expect = 2.7
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +2
Query: 383 EWLRDGQEIK-VEGATVKVHHTP-GHTTDHIVLTCLEENILFSGDCILGE--GTAVFEDL 550
+WL+DG+EI+ + V+ P GH T +VL + CI+ G E
Sbjct: 2279 KWLKDGKEIELIARIRVQTRTGPEGHITQELVLDNVTPEDAGKYTCIVENTAGKDTCEAT 2338
Query: 551 YTYMKSLQKILDLKPTLFTLVM 616
T ++SL+K + K F + +
Sbjct: 2339 LTVIESLEKKSEKKAPEFIVAL 2360
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.1 bits (62), Expect = 2.7
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +2
Query: 383 EWLRDGQEIK-VEGATVKVHHTP-GHTTDHIVLTCLEENILFSGDCILGE--GTAVFEDL 550
+WL+DG+EI+ + V+ P GH T +VL + CI+ G E
Sbjct: 2919 KWLKDGKEIELIARIRVQTRTGPEGHITQELVLDNVTPEDAGKYTCIVENTAGKDTCEAT 2978
Query: 551 YTYMKSLQKILDLKPTLFTLVM 616
T ++SL+K + K F + +
Sbjct: 2979 LTVIESLEKKSEKKAPEFIVAL 3000
>U88171-1|AAB42251.2| 630|Caenorhabditis elegans Hypothetical
protein F25F8.1 protein.
Length = 630
Score = 27.9 bits (59), Expect = 6.2
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +1
Query: 271 WWCREHIQNYSKKSHNMEAQEEFR 342
WWCR+ I K+ H ++ E R
Sbjct: 35 WWCRDCISTVCKQCHLLKGHSEHR 58
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 368 ASIPIEWLRDGQEIKVEGATVKVHHTPGHTTDHI 469
A + + WL+DG+EIK T+ + TP +++ HI
Sbjct: 3860 APVKVTWLKDGKEIKSTFRTL-ITTTPTNSSLHI 3892
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform b protein.
Length = 4203
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 368 ASIPIEWLRDGQEIKVEGATVKVHHTPGHTTDHI 469
A + + WL+DG+EIK T+ + TP +++ HI
Sbjct: 3813 APVKVTWLKDGKEIKSTFRTL-ITTTPTNSSLHI 3845
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 368 ASIPIEWLRDGQEIKVEGATVKVHHTPGHTTDHI 469
A + + WL+DG+EIK T+ + TP +++ HI
Sbjct: 4098 APVKVTWLKDGKEIKSTFRTL-ITTTPTNSSLHI 4130
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 368 ASIPIEWLRDGQEIKVEGATVKVHHTPGHTTDHI 469
A + + WL+DG+EIK T+ + TP +++ HI
Sbjct: 4098 APVKVTWLKDGKEIKSTFRTL-ITTTPTNSSLHI 4130
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 368 ASIPIEWLRDGQEIKVEGATVKVHHTPGHTTDHI 469
A + + WL+DG+EIK T+ + TP +++ HI
Sbjct: 4057 APVKVTWLKDGKEIKSTFRTL-ITTTPTNSSLHI 4089
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 368 ASIPIEWLRDGQEIKVEGATVKVHHTPGHTTDHI 469
A + + WL+DG+EIK T+ + TP +++ HI
Sbjct: 3829 APVKVTWLKDGKEIKSTFRTL-ITTTPTNSSLHI 3861
>Z92808-4|CAD54148.1| 928|Caenorhabditis elegans Hypothetical
protein M04C3.1b protein.
Length = 928
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 118 VCALKSHWTWITTENPKTLNL*KF*IPSVSLV 23
+C LK+ + W TEN K L KF PS+ +
Sbjct: 163 LCKLKATFRWCITENHKQDRLVKFFNPSLGYI 194
>Z92808-3|CAB07268.1| 946|Caenorhabditis elegans Hypothetical
protein M04C3.1a protein.
Length = 946
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 118 VCALKSHWTWITTENPKTLNL*KF*IPSVSLV 23
+C LK+ + W TEN K L KF PS+ +
Sbjct: 163 LCKLKATFRWCITENHKQDRLVKFFNPSLGYI 194
>Z81476-15|CAD54124.1| 928|Caenorhabditis elegans Hypothetical
protein M04C3.1b protein.
Length = 928
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 118 VCALKSHWTWITTENPKTLNL*KF*IPSVSLV 23
+C LK+ + W TEN K L KF PS+ +
Sbjct: 163 LCKLKATFRWCITENHKQDRLVKFFNPSLGYI 194
>Z81476-14|CAB03924.1| 946|Caenorhabditis elegans Hypothetical
protein M04C3.1a protein.
Length = 946
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 118 VCALKSHWTWITTENPKTLNL*KF*IPSVSLV 23
+C LK+ + W TEN K L KF PS+ +
Sbjct: 163 LCKLKATFRWCITENHKQDRLVKFFNPSLGYI 194
>AL132951-1|CAC44310.2| 707|Caenorhabditis elegans Hypothetical
protein Y67H2A.1 protein.
Length = 707
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +2
Query: 110 GTNTYLIGSGKNRILVDTGDNNIPEYQKHLSDVVNSEKANIEHIVLTHWHHDHVGGV 280
G + +L+ R+++D G + L V E NI+ +++TH+H DH G +
Sbjct: 23 GRSCHLLEYKGKRVMLDCGVHPGLHGVDALPFVDFVEIENIDLLLITHFHLDHCGAL 79
>AF039711-2|AAB96710.1| 416|Caenorhabditis elegans Hypothetical
protein F49D11.4 protein.
Length = 416
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +3
Query: 234 NILFSLTGTMTMLVVSRTYTKL*Q-KIP*YGSTRRVQKILLIMNYQHLF 377
+++ +L G LV YT++ + KI + T + I L+MN+QHLF
Sbjct: 175 HLINALQGEAKTLVRIDEYTRINKSKINGFYETFAIDHIDLLMNHQHLF 223
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,976,203
Number of Sequences: 27780
Number of extensions: 335600
Number of successful extensions: 1053
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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