Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24h03
         (503 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC051723-1|AAH51723.1|  657|Homo sapiens component of oligomeric...    29   7.0  
AL512505-3|CAI16937.1|  605|Homo sapiens component of oligomeric...    29   7.0  
AL512505-2|CAM23735.1|  657|Homo sapiens component of oligomeric...    29   7.0  
AF116827-1|AAD29633.1|  605|Homo sapiens unknown protein.              29   7.0  

>BC051723-1|AAH51723.1|  657|Homo sapiens component of oligomeric
           golgi complex 6 protein.
          Length = 657

 Score = 29.5 bits (63), Expect = 7.0
 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +1

Query: 235 MNLKIKAESFKQFLLSSTRDVCTAHHKWFLSLMNNSN-IRDTAKLLHTSGDSLSNLI 402
           +N  + A   +Q +  ST  VC A+ + + ++MN  N  +D   +LH S   +  L+
Sbjct: 600 LNFLLSATVKEQIVKQSTELVCRAYGEVYAAVMNPINEYKDPENILHRSPQQVQTLL 656


>AL512505-3|CAI16937.1|  605|Homo sapiens component of oligomeric
           golgi complex 6 protein.
          Length = 605

 Score = 29.5 bits (63), Expect = 7.0
 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +1

Query: 235 MNLKIKAESFKQFLLSSTRDVCTAHHKWFLSLMNNSN-IRDTAKLLHTSGDSLSNLI 402
           +N  + A   +Q +  ST  VC A+ + + ++MN  N  +D   +LH S   +  L+
Sbjct: 548 LNFLLSATVKEQIVKQSTELVCRAYGEVYAAVMNPINEYKDPENILHRSPQQVQTLL 604


>AL512505-2|CAM23735.1|  657|Homo sapiens component of oligomeric
           golgi complex 6 protein.
          Length = 657

 Score = 29.5 bits (63), Expect = 7.0
 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +1

Query: 235 MNLKIKAESFKQFLLSSTRDVCTAHHKWFLSLMNNSN-IRDTAKLLHTSGDSLSNLI 402
           +N  + A   +Q +  ST  VC A+ + + ++MN  N  +D   +LH S   +  L+
Sbjct: 600 LNFLLSATVKEQIVKQSTELVCRAYGEVYAAVMNPINEYKDPENILHRSPQQVQTLL 656


>AF116827-1|AAD29633.1|  605|Homo sapiens unknown protein.
          Length = 605

 Score = 29.5 bits (63), Expect = 7.0
 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +1

Query: 235 MNLKIKAESFKQFLLSSTRDVCTAHHKWFLSLMNNSN-IRDTAKLLHTSGDSLSNLI 402
           +N  + A   +Q +  ST  VC A+ + + ++MN  N  +D   +LH S   +  L+
Sbjct: 548 LNFLLSATVKEQIVKQSTELVCRAYGEVYAAVMNPINEYKDPENILHRSPQQVQTLL 604


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,442,193
Number of Sequences: 237096
Number of extensions: 1286483
Number of successful extensions: 1481
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1481
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)