Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24g23
(602 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 120 8e-28
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 63 2e-10
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 63 2e-10
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 62 4e-10
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 61 7e-10
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 61 7e-10
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 61 7e-10
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 57 8e-09
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 57 8e-09
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 56 1e-08
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 54 1e-07
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 54 1e-07
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 53 1e-07
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 53 1e-07
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 46 2e-05
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 42 4e-04
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 40 0.002
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 35 0.051
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 33 0.12
U39848-6|AAL11100.1| 317|Caenorhabditis elegans Not-like (yeast... 31 0.63
U39848-5|AAL11099.1| 367|Caenorhabditis elegans Not-like (yeast... 31 0.63
U39848-4|AAA80691.1| 444|Caenorhabditis elegans Not-like (yeast... 31 0.63
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 31 0.63
U58754-4|AAX22292.1| 332|Caenorhabditis elegans Serpentine rece... 29 3.4
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 29 3.4
AL033514-26|CAA22110.1| 1144|Caenorhabditis elegans Hypothetical... 29 3.4
AY572975-1|AAT77228.1| 580|Caenorhabditis elegans KQT-3 potassi... 28 4.5
AL032648-2|CAA21699.2| 621|Caenorhabditis elegans Hypothetical ... 28 4.5
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 28 5.9
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 120 bits (289), Expect = 8e-28
Identities = 51/70 (72%), Positives = 57/70 (81%)
Frame = +3
Query: 360 MAGSALRRLMAEYKQLTVNPPEGIIAGPINEDNFFEWEAFITGPEGTCFEGGIFPAKLVF 539
MAG AL+RLM EYK+LT PPEGIIA PI+EDNFFEWE ITGPE TCF G+FPA++ F
Sbjct: 1 MAGYALKRLMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITF 60
Query: 540 PPDYPLSPSK 569
P DYPLSP K
Sbjct: 61 PQDYPLSPPK 70
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 62.9 bits (146), Expect = 2e-10
Identities = 30/68 (44%), Positives = 38/68 (55%)
Frame = +3
Query: 360 MAGSALRRLMAEYKQLTVNPPEGIIAGPINEDNFFEWEAFITGPEGTCFEGGIFPAKLVF 539
M + RRLM ++K+L +PP G+ P EDN WEA I GP+ T FE G F L F
Sbjct: 1 MTTPSRRRLMRDFKKLQEDPPAGVSGAP-TEDNILTWEAIIFGPQETPFEDGTFKLSLEF 59
Query: 540 PPDYPLSP 563
+YP P
Sbjct: 60 TEEYPNKP 67
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 62.9 bits (146), Expect = 2e-10
Identities = 30/68 (44%), Positives = 38/68 (55%)
Frame = +3
Query: 360 MAGSALRRLMAEYKQLTVNPPEGIIAGPINEDNFFEWEAFITGPEGTCFEGGIFPAKLVF 539
M + RRLM ++K+L +PP G+ P EDN WEA I GP+ T FE G F L F
Sbjct: 1 MTTPSRRRLMRDFKKLQEDPPAGVSGAP-TEDNILTWEAIIFGPQETPFEDGTFKLSLEF 59
Query: 540 PPDYPLSP 563
+YP P
Sbjct: 60 TEEYPNKP 67
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 61.7 bits (143), Expect = 4e-10
Identities = 31/65 (47%), Positives = 40/65 (61%)
Frame = +3
Query: 369 SALRRLMAEYKQLTVNPPEGIIAGPINEDNFFEWEAFITGPEGTCFEGGIFPAKLVFPPD 548
+ +RRLM E +L P E A P+ EDN FEW I G GT FEGGI+ +++FP D
Sbjct: 10 AGVRRLMKEAMELR-QPTEMYHAQPM-EDNLFEWHFTIRGTLGTDFEGGIYHGRIIFPAD 67
Query: 549 YPLSP 563
YP+ P
Sbjct: 68 YPMKP 72
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 60.9 bits (141), Expect = 7e-10
Identities = 28/68 (41%), Positives = 40/68 (58%)
Frame = +3
Query: 372 ALRRLMAEYKQLTVNPPEGIIAGPINEDNFFEWEAFITGPEGTCFEGGIFPAKLVFPPDY 551
AL+R+ E + L +PP AGP+ +D F W+A I GP + ++GG+F + FP DY
Sbjct: 2 ALKRIQKELQDLGRDPPAQCSAGPVGDD-LFHWQATIMGPPESPYQGGVFFLTIHFPTDY 60
Query: 552 PLSPSKDA 575
P P K A
Sbjct: 61 PFKPPKVA 68
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 60.9 bits (141), Expect = 7e-10
Identities = 28/68 (41%), Positives = 40/68 (58%)
Frame = +3
Query: 372 ALRRLMAEYKQLTVNPPEGIIAGPINEDNFFEWEAFITGPEGTCFEGGIFPAKLVFPPDY 551
AL+R+ E + L +PP AGP+ +D F W+A I GP + ++GG+F + FP DY
Sbjct: 2 ALKRIQKELQDLGRDPPAQCSAGPVGDD-LFHWQATIMGPPESPYQGGVFFLTIHFPTDY 60
Query: 552 PLSPSKDA 575
P P K A
Sbjct: 61 PFKPPKVA 68
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 60.9 bits (141), Expect = 7e-10
Identities = 30/67 (44%), Positives = 36/67 (53%)
Frame = +3
Query: 363 AGSALRRLMAEYKQLTVNPPEGIIAGPINEDNFFEWEAFITGPEGTCFEGGIFPAKLVFP 542
+ ALR L E K L P EG +NEDN F W I GP T ++GG F A + FP
Sbjct: 8 SSGALRALTMELKNLQSQPVEGFTID-VNEDNLFVWTVGIYGPPKTLYQGGYFKASIRFP 66
Query: 543 PDYPLSP 563
+YP SP
Sbjct: 67 SNYPYSP 73
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 57.2 bits (132), Expect = 8e-09
Identities = 24/65 (36%), Positives = 41/65 (63%)
Frame = +3
Query: 375 LRRLMAEYKQLTVNPPEGIIAGPINEDNFFEWEAFITGPEGTCFEGGIFPAKLVFPPDYP 554
L++ +A+ +++ P +G AG +++++ ++WE + GP T +EGG F A L FP DYP
Sbjct: 8 LKKQLADMRRV---PVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYP 64
Query: 555 LSPSK 569
P K
Sbjct: 65 QKPPK 69
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 57.2 bits (132), Expect = 8e-09
Identities = 28/67 (41%), Positives = 40/67 (59%)
Frame = +3
Query: 363 AGSALRRLMAEYKQLTVNPPEGIIAGPINEDNFFEWEAFITGPEGTCFEGGIFPAKLVFP 542
+ SA+RRL +Y +L +P +GI A P NEDN EW + G T F GG + K++F
Sbjct: 17 SSSAVRRLQKDYAKLMQDPVDGIKALP-NEDNILEWHYCLRGSPDTPFYGGYYWGKVIFK 75
Query: 543 PDYPLSP 563
++P SP
Sbjct: 76 ENFPWSP 82
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 56.4 bits (130), Expect = 1e-08
Identities = 27/64 (42%), Positives = 37/64 (57%)
Frame = +3
Query: 372 ALRRLMAEYKQLTVNPPEGIIAGPINEDNFFEWEAFITGPEGTCFEGGIFPAKLVFPPDY 551
AL+RL +Y++L P + A P+ E N EW I G T +EGGI+ KL+FP D+
Sbjct: 9 ALQRLKKDYQRLLKEPVPFMKAAPL-ETNILEWRYIIIGAPKTPYEGGIYMGKLLFPKDF 67
Query: 552 PLSP 563
P P
Sbjct: 68 PFKP 71
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Frame = +3
Query: 360 MAGSALRRLMAEYKQLTVNPPEGIIAGPI-NED---NFFEWEAFITGPEGTCFEGGIFPA 527
M+G A RL E K + P G IA P+ N D N F WE I G + T +EGG++
Sbjct: 1 MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRI 60
Query: 528 KLVFPPDYPLSPSK 569
+++F D+P +P K
Sbjct: 61 RMLFKDDFPSTPPK 74
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Frame = +3
Query: 360 MAGSALRRLMAEYKQLTVNPPEGIIAGPI-NED---NFFEWEAFITGPEGTCFEGGIFPA 527
M+G A RL E K + P G IA P+ N D N F WE I G + T +EGG++
Sbjct: 1 MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRI 60
Query: 528 KLVFPPDYPLSPSK 569
+++F D+P +P K
Sbjct: 61 RMLFKDDFPSTPPK 74
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 53.2 bits (122), Expect = 1e-07
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +3
Query: 360 MAGSALRRLMAEYKQLTVNPPEGIIAGPINEDNFF-EWEAFITGPEGTCFEGGIFPAKLV 536
M+ +A RRLM E QL PEG++ + N +W+ + G EGT + G +F +
Sbjct: 1 MSDAATRRLMKELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFT 60
Query: 537 FPPDYPLSPSKDAIFV 584
F P YP + S + +FV
Sbjct: 61 FGPQYPFN-SPEVMFV 75
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/70 (37%), Positives = 40/70 (57%)
Frame = +3
Query: 360 MAGSALRRLMAEYKQLTVNPPEGIIAGPINEDNFFEWEAFITGPEGTCFEGGIFPAKLVF 539
MAG RR++ E ++L +P GI A P +E N + I GP+ + F GG+F +L
Sbjct: 1 MAGQLPRRIIKETQRLLADPVPGISANP-DESNARYFHVMIAGPDDSPFAGGVFKLELFL 59
Query: 540 PPDYPLSPSK 569
P +YP++ K
Sbjct: 60 PEEYPMAAPK 69
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +3
Query: 360 MAGSALRRLMAEYKQLTVNPPEGIIAG---PINEDNFFEWEAFITGPEGTCFEGGIFPAK 530
M+ AL R+ + K++ N + AG I E+N + + FI GPEGT + GG F K
Sbjct: 15 MSNLALARVTRKCKEVA-NASDITEAGIHVEIKENNLMDIKGFIKGPEGTPYAGGTFEIK 73
Query: 531 LVFPPDYPLSPSK 569
+ P YP P K
Sbjct: 74 VDIPEHYPFEPPK 86
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 41.5 bits (93), Expect = 4e-04
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = +3
Query: 360 MAGSALRRLMAEYKQLTVNPP---EGIIAGPINEDNFFEWEAFITGPEGTCFEGGIFPAK 530
M+ A RL E K++ N GI+ +NE N E + I GP T + GG+F
Sbjct: 1 MSNIAFNRLQRECKEVVTNSEISETGIMIEILNE-NLTEIKGHIRGPPDTPYAGGMFDLD 59
Query: 531 LVFPPDYPLSP 563
+ P YP SP
Sbjct: 60 IKIPDQYPFSP 70
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +3
Query: 372 ALRRLMAEYKQLTVNPPEGIIAGPINEDNFFEWEAFITGPEGTCFEGGIF 521
AL+R+ E L +PP G + +D + W+A I GP + ++GGIF
Sbjct: 2 ALKRIQKELHDLGRDPPAQCSTGSVGDD-LYHWQATIMGPPESPYQGGIF 50
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 34.7 bits (76), Expect = 0.051
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 471 EAFITGPEGTCFEGGIFPAKLVFPPDYPLSPSKDA 575
+ I+GP+ T + G+F + FP YP SP K A
Sbjct: 446 KVLISGPDDTPYANGLFEFDIFFPTGYPFSPPKCA 480
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 33.5 bits (73), Expect = 0.12
Identities = 21/69 (30%), Positives = 27/69 (39%)
Frame = +3
Query: 369 SALRRLMAEYKQLTVNPPEGIIAGPINEDNFFEWEAFITGPEGTCFEGGIFPAKLVFPPD 548
SA RRL E L + E N +W + P+ + G F + FP D
Sbjct: 2 SATRRLQKELGDLKNCGVKAYENVECEETNLLKWTVLLI-PDKEPYNKGAFKVGITFPVD 60
Query: 549 YPLSPSKDA 575
YP P K A
Sbjct: 61 YPFKPPKVA 69
>U39848-6|AAL11100.1| 317|Caenorhabditis elegans Not-like (yeast
ccr4/not complexcomponent) protein 2, isoform c protein.
Length = 317
Score = 31.1 bits (67), Expect = 0.63
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +3
Query: 339 FKITDQMMAGSALRRLMAEYKQLTVNP--PEGIIAGPINEDNFFEWEAFITGPE 494
+ + DQM + L EYK+L P P+ + P FF+ F +GPE
Sbjct: 201 YNVFDQMQWRKIPKELKLEYKELEDRPKMPQSVSGQPTPYKYFFQGPQFPSGPE 254
>U39848-5|AAL11099.1| 367|Caenorhabditis elegans Not-like (yeast
ccr4/not complexcomponent) protein 2, isoform b protein.
Length = 367
Score = 31.1 bits (67), Expect = 0.63
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +3
Query: 339 FKITDQMMAGSALRRLMAEYKQLTVNP--PEGIIAGPINEDNFFEWEAFITGPE 494
+ + DQM + L EYK+L P P+ + P FF+ F +GPE
Sbjct: 251 YNVFDQMQWRKIPKELKLEYKELEDRPKMPQSVSGQPTPYKYFFQGPQFPSGPE 304
>U39848-4|AAA80691.1| 444|Caenorhabditis elegans Not-like (yeast
ccr4/not complexcomponent) protein 2, isoform a protein.
Length = 444
Score = 31.1 bits (67), Expect = 0.63
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +3
Query: 339 FKITDQMMAGSALRRLMAEYKQLTVNP--PEGIIAGPINEDNFFEWEAFITGPE 494
+ + DQM + L EYK+L P P+ + P FF+ F +GPE
Sbjct: 328 YNVFDQMQWRKIPKELKLEYKELEDRPKMPQSVSGQPTPYKYFFQGPQFPSGPE 381
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 31.1 bits (67), Expect = 0.63
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 480 ITGPEGTCFEGGIFPAKLVFPPDYP 554
I GP T +E G+F L FP +YP
Sbjct: 35 IAGPADTPYETGVFEVDLTFPDNYP 59
>U58754-4|AAX22292.1| 332|Caenorhabditis elegans Serpentine
receptor, class sx protein15 protein.
Length = 332
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = -2
Query: 280 ITNILHGMISVCENKVNS*CNPMQLMRTTENALMPSEIIQSTIYTCLIVLFFS 122
+ +++ G I + +N V S CNP + T NA+ ++ I+T L VLF+S
Sbjct: 142 VISVIFGFIFL-DNAVLSMCNPPSSLHTYANAIWYCIMM---IFTILTVLFYS 190
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +3
Query: 420 PEGIIAGPIN---EDNFFEWEAFITGPEGTCFEGGIFPAKLVFPPDYPLSP 563
P+G A PI+ D + W + GP G+ +EGG + + F +P+ P
Sbjct: 52 PQGYTAKPISFEGADIWCSWICTVPGPRGSPWEGGEYEVSVNF-HKWPIIP 101
>AL033514-26|CAA22110.1| 1144|Caenorhabditis elegans Hypothetical
protein Y75B8A.26 protein.
Length = 1144
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -3
Query: 579 KLHLWRDSMDNQVGRLILLEKCHLQNTCL 493
KL+ W +S ++Q+ RL E L+N C+
Sbjct: 129 KLYAWEESFEDQINRLRAKEVKMLRNVCI 157
>AY572975-1|AAT77228.1| 580|Caenorhabditis elegans KQT-3 potassium
channel protein.
Length = 580
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 321 QRTILSFKITDQMMAGSALRRLMAEYKQLTVNP-PEGIIAGPIN 449
Q + L K+ +AL RLMA+ LT++P P +I+ P++
Sbjct: 510 QMSSLDRKVESSNRTLNALYRLMADRNSLTISPSPPALISRPVS 553
>AL032648-2|CAA21699.2| 621|Caenorhabditis elegans Hypothetical
protein Y54G9A.3 protein.
Length = 621
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 321 QRTILSFKITDQMMAGSALRRLMAEYKQLTVNP-PEGIIAGPIN 449
Q + L K+ +AL RLMA+ LT++P P +I+ P++
Sbjct: 551 QMSSLDRKVESSNRTLNALYRLMADRNSLTISPSPPALISRPVS 594
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +3
Query: 381 RLMAEYKQLTVNPPEGIIAGPINEDN---FFEWEAFITGPEGTCFEGGIFPAKLVFPPDY 551
RL+ E ++ +G I+ + +D+ W A I GP T +E I+ ++ +Y
Sbjct: 9 RLLEELEEGQKGKGDGNISWGLEDDSDMTLTRWTASIIGPPRTPYESRIYNLQIQCGGNY 68
Query: 552 PLSP 563
P P
Sbjct: 69 PREP 72
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = -2
Query: 541 GKTNFAGKMPPSKHVPSGPVMKASHSKKLSSFIGPAIIPSGG 416
G G PP P GP M S + GP PSGG
Sbjct: 290 GGPGMPGSFPPGAPGPGGPGMPGSFAPGAPGPGGPGGYPSGG 331
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,243,594
Number of Sequences: 27780
Number of extensions: 302762
Number of successful extensions: 719
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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