Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24g14
         (338 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024859-18|AAK29974.1|  121|Caenorhabditis elegans Hypothetical...    62   1e-10
Z81562-7|CAB04561.1|  367|Caenorhabditis elegans Hypothetical pr...    29   0.64 
Z75714-9|CAN86912.1|   90|Caenorhabditis elegans Hypothetical pr...    28   1.5  
Z99281-43|CAJ76962.1|  257|Caenorhabditis elegans Hypothetical p...    28   2.0  
Z99281-42|CAB16505.2|  269|Caenorhabditis elegans Hypothetical p...    28   2.0  
Z69634-9|CAO82013.1|  575|Caenorhabditis elegans Hypothetical pr...    27   2.6  
Z69634-8|CAA93452.4|  591|Caenorhabditis elegans Hypothetical pr...    27   2.6  
U41015-2|AAA82311.1|  491|Caenorhabditis elegans Vacuolar h atpa...    27   3.4  
AF025463-1|AAB71008.3|  871|Caenorhabditis elegans Hypothetical ...    27   3.4  
AF047655-10|AAC04396.1|  335|Caenorhabditis elegans Hypothetical...    27   4.5  
Z82057-5|CAB04861.3|  325|Caenorhabditis elegans Hypothetical pr...    26   7.9  
Z81142-11|CAB03512.3|  325|Caenorhabditis elegans Hypothetical p...    26   7.9  
Z54342-4|CAA91150.1|  447|Caenorhabditis elegans Hypothetical pr...    26   7.9  
Z46828-5|CAA86861.3|  596|Caenorhabditis elegans Hypothetical pr...    26   7.9  
U80030-13|AAG24169.1|  831|Caenorhabditis elegans Hypothetical p...    26   7.9  

>AC024859-18|AAK29974.1|  121|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.5 protein.
          Length = 121

 Score = 61.7 bits (143), Expect = 1e-10
 Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
 Frame = +2

Query: 101 DPRYPFQNQTRACYDNYCDYFKCTRLLGE-VDDCKIFKRYYETICPNYWISHWDEQREKG 277
           D R+P   + R C+  Y D+ +C  L+G+    CK F+  Y+  CP +W   WDE   +G
Sbjct: 54  DARFPQVRKQRQCFAYYVDFHRCNELMGQDYKPCKFFQNVYKDFCPGFWTERWDELLSEG 113

Query: 278 IFP 286
            FP
Sbjct: 114 RFP 116


>Z81562-7|CAB04561.1|  367|Caenorhabditis elegans Hypothetical
           protein K03D7.11 protein.
          Length = 367

 Score = 29.5 bits (63), Expect = 0.64
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
 Frame = -2

Query: 328 PIRILKFIIQLNRSWENALLTLFIPMRDPIIRAYSFVISLEYFAIINFAEET---GAFEI 158
           PI  +  I+ L ++ +N+L T         +R+    I L  F  I F   T   G   I
Sbjct: 244 PITTISLIMDLRKARKNSLFTKSSLSSSDTVRS----IKLVAFVTITFLFTTTPLGFMYI 299

Query: 157 ITVVIVTRPGLVL 119
           + + IVT PGL++
Sbjct: 300 VGIFIVTMPGLIM 312


>Z75714-9|CAN86912.1|   90|Caenorhabditis elegans Hypothetical
           protein ZC434.7b protein.
          Length = 90

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 11/49 (22%), Positives = 24/49 (48%)
 Frame = +2

Query: 110 YPFQNQTRACYDNYCDYFKCTRLLGEVDDCKIFKRYYETICPNYWISHW 256
           Y  ++Q  AC D +    K  +     + C+  ++ ++  CP  W++H+
Sbjct: 16  YEARDQYAACIDKFLSQGKSEK--EATNSCRSERKNFDGNCPTSWVNHF 62


>Z99281-43|CAJ76962.1|  257|Caenorhabditis elegans Hypothetical
           protein Y57G11C.3b protein.
          Length = 257

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
 Frame = -2

Query: 292 RSWENALLTLFIPM---RDPIIRAYSFVISLEYFAIINFAEETGAFEII 155
           R + N L  +F+PM   +DP + A  + ISL  + +      T  F+I+
Sbjct: 90  RLFPNELRDVFVPMQIFKDPCLTAQHYEISLRKYLLPEQLNNTARFDIL 138


>Z99281-42|CAB16505.2|  269|Caenorhabditis elegans Hypothetical
           protein Y57G11C.3a protein.
          Length = 269

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
 Frame = -2

Query: 292 RSWENALLTLFIPM---RDPIIRAYSFVISLEYFAIINFAEETGAFEII 155
           R + N L  +F+PM   +DP + A  + ISL  + +      T  F+I+
Sbjct: 102 RLFPNELRDVFVPMQIFKDPCLTAQHYEISLRKYLLPEQLNNTARFDIL 150


>Z69634-9|CAO82013.1|  575|Caenorhabditis elegans Hypothetical
           protein B0001.3b protein.
          Length = 575

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +2

Query: 47  KNLDFFTMCDQEFRTLRIDPRYPFQ 121
           KNL FF + D+ F  +  DPR P Q
Sbjct: 16  KNLYFFVIIDKGFSAILNDPREPVQ 40


>Z69634-8|CAA93452.4|  591|Caenorhabditis elegans Hypothetical
           protein B0001.3a protein.
          Length = 591

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +2

Query: 47  KNLDFFTMCDQEFRTLRIDPRYPFQ 121
           KNL FF + D+ F  +  DPR P Q
Sbjct: 16  KNLYFFVIIDKGFSAILNDPREPVQ 40


>U41015-2|AAA82311.1|  491|Caenorhabditis elegans Vacuolar h atpase
           protein 12 protein.
          Length = 491

 Score = 27.1 bits (57), Expect = 3.4
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = -2

Query: 181 EETGAFEIITVVIVTRPGLVLERV--PRVDTQSSKFLIAHCKK 59
           EE G+ E + + +       +ER+  PR+   S++FL   CKK
Sbjct: 229 EENGSMENVCLFLNLANDPTIERIITPRIALTSAEFLAYQCKK 271


>AF025463-1|AAB71008.3|  871|Caenorhabditis elegans Hypothetical
           protein K10B4.3 protein.
          Length = 871

 Score = 27.1 bits (57), Expect = 3.4
 Identities = 15/76 (19%), Positives = 39/76 (51%)
 Frame = -2

Query: 325 IRILKFIIQLNRSWENALLTLFIPMRDPIIRAYSFVISLEYFAIINFAEETGAFEIITVV 146
           ++I+  +++ N S    L  ++   ++P     S +I L     ++ +E+    ++ ++V
Sbjct: 171 LQIISNVVRGNYSLIRVLPHIYPDNKEPFHAQLSQLIDLLQNTEVDCSEKLSLLQLSSMV 230

Query: 145 IVTRPGLVLERVPRVD 98
             T+P +++  +PR D
Sbjct: 231 ANTKPDVLIPFLPRFD 246


>AF047655-10|AAC04396.1|  335|Caenorhabditis elegans Hypothetical
           protein C17B7.2 protein.
          Length = 335

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +2

Query: 44  DKNLDFFTMCDQEFRTLRIDPRYPFQNQTRACYDNYCD 157
           DK+   FT C    RTL+  P +P + Q       YCD
Sbjct: 201 DKSCTQFTPC---LRTLQCGPEHPARKQKLNLIRTYCD 235


>Z82057-5|CAB04861.3|  325|Caenorhabditis elegans Hypothetical
           protein ZK1037.11 protein.
          Length = 325

 Score = 25.8 bits (54), Expect = 7.9
 Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
 Frame = -2

Query: 331 FPIRILKFIIQLNRSWENALLTLFIP--MRDPIIRAYSFVISLEYFAIINFAEETGAFEI 158
           FP+ I+  + + NR  E  L T  I        +++Y+F+  L ++  +    ++  F I
Sbjct: 44  FPLYII--VYRKNRKREKNLPTFPIVSHFHKATVKSYTFLFILIFWLALATFSDSVNFGI 101

Query: 157 ITVVIVT 137
           +T++I+T
Sbjct: 102 VTIIILT 108


>Z81142-11|CAB03512.3|  325|Caenorhabditis elegans Hypothetical
           protein ZK1037.11 protein.
          Length = 325

 Score = 25.8 bits (54), Expect = 7.9
 Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
 Frame = -2

Query: 331 FPIRILKFIIQLNRSWENALLTLFIP--MRDPIIRAYSFVISLEYFAIINFAEETGAFEI 158
           FP+ I+  + + NR  E  L T  I        +++Y+F+  L ++  +    ++  F I
Sbjct: 44  FPLYII--VYRKNRKREKNLPTFPIVSHFHKATVKSYTFLFILIFWLALATFSDSVNFGI 101

Query: 157 ITVVIVT 137
           +T++I+T
Sbjct: 102 VTIIILT 108


>Z54342-4|CAA91150.1|  447|Caenorhabditis elegans Hypothetical
           protein C08H9.7 protein.
          Length = 447

 Score = 25.8 bits (54), Expect = 7.9
 Identities = 15/60 (25%), Positives = 24/60 (40%)
 Frame = +2

Query: 47  KNLDFFTMCDQEFRTLRIDPRYPFQNQTRACYDNYCDYFKCTRLLGEVDDCKIFKRYYET 226
           K +DFF +   +FR  ++ P  P         D    Y+ C    G+     IF  ++ T
Sbjct: 265 KFVDFFNIYSTQFREKQVGPDSPLYGGEGRNIDETMKYYTCK--TGQPSKFNIFVSFHGT 322


>Z46828-5|CAA86861.3|  596|Caenorhabditis elegans Hypothetical
           protein R03D7.8 protein.
          Length = 596

 Score = 25.8 bits (54), Expect = 7.9
 Identities = 14/43 (32%), Positives = 17/43 (39%)
 Frame = +2

Query: 89  TLRIDPRYPFQNQTRACYDNYCDYFKCTRLLGEVDDCKIFKRY 217
           T  +DPRY   N    CY  Y D  +  R        +I  RY
Sbjct: 25  TTTLDPRYDEMNNDLVCYSKY-DKSRVVRCNSACVQKRIVSRY 66


>U80030-13|AAG24169.1|  831|Caenorhabditis elegans Hypothetical
           protein K12D9.12 protein.
          Length = 831

 Score = 25.8 bits (54), Expect = 7.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 137 CYDNYCDYFKCTRLLGEVDDC 199
           CY NY D++   ++ G   DC
Sbjct: 502 CYTNYLDHYMNMKIFGNKRDC 522


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,869,585
Number of Sequences: 27780
Number of extensions: 164849
Number of successful extensions: 408
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 407
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 429601520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)