Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24g09
(557 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF040653-10|AAB95029.1| 580|Caenorhabditis elegans F-box b prot... 31 0.43
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 30 0.98
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 30 0.98
AF040649-3|AAK72087.1| 317|Caenorhabditis elegans Serpentine re... 29 3.0
Z82083-7|CAB04969.2| 274|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p... 27 6.9
Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue... 27 6.9
U49944-4|AAA93419.1| 457|Caenorhabditis elegans Neuropeptide re... 27 6.9
AC024882-14|AAF60927.1| 360|Caenorhabditis elegans Hypothetical... 27 6.9
Z78415-9|CAI58633.1| 685|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z78415-8|CAB01675.2| 765|Caenorhabditis elegans Hypothetical pr... 27 9.1
AY912076-1|AAX81408.1| 685|Caenorhabditis elegans extracellular... 27 9.1
>AF040653-10|AAB95029.1| 580|Caenorhabditis elegans F-box b protein
protein 49 protein.
Length = 580
Score = 31.5 bits (68), Expect = 0.43
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 4 KEENNYDTFMKL-INSKVYINIKYLHKVFTMNTHLMIFVFISLLMSGIVCENKYTRSANE 180
+E+N D KL +N + + +L T+ T I VF+ M+G+ E KY NE
Sbjct: 451 QEQNTVDLAFKLSLNELLLTSCTFLKVTSTLLTDKEINVFLKHWMAGLKPELKYLSIENE 510
Query: 181 KND 189
+ D
Sbjct: 511 EQD 513
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 30.3 bits (65), Expect = 0.98
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Frame = +1
Query: 151 ENKYTRSANEKNDDAKVDFRT------LEKPFRMNKLNLLWTKAQQRLTEPKLKSLYSDL 312
E K T EKN+DA + +T +EKP + K + KA++ +K +D
Sbjct: 563 EKKKTEGEEEKNEDAAGEEKTEEKTEEVEKPVVVKKTKPVEPKAKKINVALTIKETKTDN 622
Query: 313 MLHDKEEIT-YKRFKSDGGDKEGLKEAELRRKLSNIMSVYGLLEHFDPKADRQKDHPAFN 489
+ ++EE+T K+ D KE KE R + N + GLL +D A R +D +
Sbjct: 623 IDLNEEEVTAAKKVLGDFEQKE--KEKHDREEAMNRLE--GLL--YD-LAVRLEDGEEYA 675
Query: 490 SAMDDHINRSIFKDKKLNMLW 552
+ ++I ++ + LW
Sbjct: 676 EYATEEEKKAILEEVAVLKLW 696
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 30.3 bits (65), Expect = 0.98
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 7/141 (4%)
Frame = +1
Query: 151 ENKYTRSANEKNDDAKVDFRT------LEKPFRMNKLNLLWTKAQQRLTEPKLKSLYSDL 312
E K T EKN+DA + +T +EKP + K + KA++ +K +D
Sbjct: 579 EKKKTEGEEEKNEDAAGEEKTEEKTEEVEKPVVVKKTKPVEPKAKKINVALTIKETKTDN 638
Query: 313 MLHDKEEIT-YKRFKSDGGDKEGLKEAELRRKLSNIMSVYGLLEHFDPKADRQKDHPAFN 489
+ ++EE+T K+ D KE KE R + N + GLL +D A R +D +
Sbjct: 639 IDLNEEEVTAAKKVLGDFEQKE--KEKHDREEAMNRLE--GLL--YD-LAVRLEDGEEYA 691
Query: 490 SAMDDHINRSIFKDKKLNMLW 552
+ ++I ++ + LW
Sbjct: 692 EYATEEEKKAILEEVAVLKLW 712
>AF040649-3|AAK72087.1| 317|Caenorhabditis elegans Serpentine
receptor, class i protein36 protein.
Length = 317
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +1
Query: 73 LHKVFTMNTHLMIFVFISLLMSGIVC 150
L KVF + +H ++ V+ SLL+S IVC
Sbjct: 82 LVKVFNIYSHYLLAVWTSLLISEIVC 107
>Z82083-7|CAB04969.2| 274|Caenorhabditis elegans Hypothetical
protein ZK1010.3 protein.
Length = 274
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/47 (23%), Positives = 23/47 (48%)
Frame = +1
Query: 253 WTKAQQRLTEPKLKSLYSDLMLHDKEEITYKRFKSDGGDKEGLKEAE 393
W + R + ++ Y + H K ++ + D DK+G+K+A+
Sbjct: 206 WRSVEDRKNARECETAYVKMYQHSKVDLKNRHIAIDVKDKKGVKKAQ 252
>Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical
protein T04H1.4b protein.
Length = 1312
Score = 27.5 bits (58), Expect = 6.9
Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Frame = +1
Query: 157 KYTRSANEKNDDAKVDFRTLEKPFRMNKLNLLWTKAQQRLTEPKLKSLYSDLMLHDKEEI 336
K + EKN + + N+ L A+ +L E + L+++ E
Sbjct: 743 KELKEVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEE 802
Query: 337 TYKRFK---SDGGDKEGLKEAELRRKLSN 414
KR++ S+ +GL ELR+K+ +
Sbjct: 803 NEKRYEQLVSESDSSDGLSYTELRKKVED 831
>Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical
protein T04H1.4a protein.
Length = 1298
Score = 27.5 bits (58), Expect = 6.9
Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Frame = +1
Query: 157 KYTRSANEKNDDAKVDFRTLEKPFRMNKLNLLWTKAQQRLTEPKLKSLYSDLMLHDKEEI 336
K + EKN + + N+ L A+ +L E + L+++ E
Sbjct: 729 KELKEVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEE 788
Query: 337 TYKRFK---SDGGDKEGLKEAELRRKLSN 414
KR++ S+ +GL ELR+K+ +
Sbjct: 789 NEKRYEQLVSESDSSDGLSYTELRKKVED 817
>Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical
protein F58H1.1b protein.
Length = 1145
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +1
Query: 367 DKEGLKEAELRRKLSNIMSVYGLLEHFDPKADRQKDHPA--FNSAMDDHIN 513
++EG+ EA++ KL L +H D KDH + M D +N
Sbjct: 551 EEEGMVEAKIFEKLVTARRALSLFQHHDGVTGTAKDHVVLDYGQKMIDALN 601
>Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical
protein F58H1.1a protein.
Length = 1143
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +1
Query: 367 DKEGLKEAELRRKLSNIMSVYGLLEHFDPKADRQKDHPA--FNSAMDDHIN 513
++EG+ EA++ KL L +H D KDH + M D +N
Sbjct: 549 EEEGMVEAKIFEKLVTARRALSLFQHHDGVTGTAKDHVVLDYGQKMIDALN 599
>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
ceRAD50 protein.
Length = 1298
Score = 27.5 bits (58), Expect = 6.9
Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Frame = +1
Query: 157 KYTRSANEKNDDAKVDFRTLEKPFRMNKLNLLWTKAQQRLTEPKLKSLYSDLMLHDKEEI 336
K + EKN + + N+ L A+ +L E + L+++ E
Sbjct: 729 KELKEVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEE 788
Query: 337 TYKRFK---SDGGDKEGLKEAELRRKLSN 414
KR++ S+ +GL ELR+K+ +
Sbjct: 789 NEKRYEQLVSESDSSDGLSYTELRKKVED 817
>U49944-4|AAA93419.1| 457|Caenorhabditis elegans Neuropeptide
receptor family protein1 protein.
Length = 457
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 295 SLYSDLMLHDKEEITYKRFKSDGGDKEGLKEAELRRKLSNI 417
S+Y ++HD + + + GG E LKE EL N+
Sbjct: 372 SVYKTKIVHDTKHLNGRAKIGGGGSHEALKERELNSCSENL 412
>AC024882-14|AAF60927.1| 360|Caenorhabditis elegans Hypothetical
protein Y9C9A.1 protein.
Length = 360
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 238 KLNLLWTKAQQRLTEPKLKSLYSDLMLHDK-EEITY 342
K+N TK +R+T +L+ + D H++ E+IT+
Sbjct: 294 KVNTALTKTSERITTSQLQRMIQDATTHERIEKITF 329
>Z78415-9|CAI58633.1| 685|Caenorhabditis elegans Hypothetical
protein C17G1.6b protein.
Length = 685
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 280 EPKLKSLYSDLMLHDKEEITYKRFKSDGGDKEGLKEAELRRKLSNIMSVYG 432
E + L + H ++ + +K FK +GGD++GL+ SN+ V G
Sbjct: 137 EETWRQLIRSAIRHVEQNVCFK-FKENGGDRDGLRYYRGNGCWSNVGRVGG 186
>Z78415-8|CAB01675.2| 765|Caenorhabditis elegans Hypothetical
protein C17G1.6a protein.
Length = 765
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 280 EPKLKSLYSDLMLHDKEEITYKRFKSDGGDKEGLKEAELRRKLSNIMSVYG 432
E + L + H ++ + +K FK +GGD++GL+ SN+ V G
Sbjct: 137 EETWRQLIRSAIRHVEQNVCFK-FKENGGDRDGLRYYRGNGCWSNVGRVGG 186
>AY912076-1|AAX81408.1| 685|Caenorhabditis elegans extracellular
matrix metalloproteaseprotein.
Length = 685
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 280 EPKLKSLYSDLMLHDKEEITYKRFKSDGGDKEGLKEAELRRKLSNIMSVYG 432
E + L + H ++ + +K FK +GGD++GL+ SN+ V G
Sbjct: 137 EETWRQLIRSAIRHVEQNVCFK-FKENGGDRDGLRYYRGNGCWSNVGRVGG 186
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,110,206
Number of Sequences: 27780
Number of extensions: 200018
Number of successful extensions: 572
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 572
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -