Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24g08
         (532 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    30   0.013
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    30   0.013
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    23   1.9  
DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    21   5.9  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    21   5.9  
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    21   5.9  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   7.9  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 30.3 bits (65), Expect = 0.013
 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = +1

Query: 1   EDIEGDVGYFYKIVYKLEKSFQDVPETYRLAASVREKMDSF-KTNLPIIQTLGNPGMKPR 177
           E + G+     K  Y L+    D+PETY +    R+ +D F +    +I+   N  M  +
Sbjct: 237 EPLSGETNDPNKTEYTLKIYTHDIPETYNVVRKFRDVLDEFPQPKHMLIEAYTNLSMTMK 296

Query: 178 HWEKISD 198
           +++  +D
Sbjct: 297 YYDYGAD 303


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 30.3 bits (65), Expect = 0.013
 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
 Frame = +1

Query: 1   EDIEGDVGYFYKIVYKLEKSFQDVPETYRLAASVREKMDSF-KTNLPIIQTLGNPGMKPR 177
           E + G+     K  Y L+    D+PETY +    R+ +D F +    +I+   N  M  +
Sbjct: 237 EPLSGETNDPNKTEYTLKIYTHDIPETYNVVRKFRDVLDEFPQPKHMLIEAYTNLSMTMK 296

Query: 178 HWEKISD 198
           +++  +D
Sbjct: 297 YYDYGAD 303


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -1

Query: 424 HLHLTKYKFPYLCKEEYRTSSQPIPSSSYPA 332
           H+H T +         +   S P+  SSYPA
Sbjct: 425 HIHATPHHHHSHAATPHHQHSTPLAHSSYPA 455


>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 100 QTRQDDKFLEHLGRIFP 50
           +TRQ  K L H+ R +P
Sbjct: 87  ETRQIKKVLSHIQRTYP 103


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +3

Query: 36  NSLQIGKILPRCSRNLSSCRVCQRKD 113
           N L +GK    C + +  CR    KD
Sbjct: 63  NCLSLGKAGGHCEKGVCICRKTSFKD 88


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 100 QTRQDDKFLEHLGRIFP 50
           +TRQ  K L H+ R +P
Sbjct: 87  ETRQIKKVLSHIQRTYP 103


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 451 CDRPEAIVFHL 419
           C  P+ IVFHL
Sbjct: 167 CSLPQTIVFHL 177


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.138    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,775
Number of Sequences: 438
Number of extensions: 3701
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14968302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)