Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24g06
(601 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_03_0203 + 16365262-16365644,16365774-16365869,16365991-163662... 32 0.31
06_01_0232 + 1779568-1779846 31 0.53
02_01_0554 + 4083020-4083854,4083877-4083906,4084843-4084911,408... 31 0.53
08_01_0246 - 2028701-2029060,2029149-2030606,2030729-2031160 31 0.93
05_04_0040 + 17429281-17429371,17429433-17430150,17431387-174314... 30 1.2
08_02_0717 + 20372728-20372836,20372936-20373078,20374131-203742... 30 1.6
04_04_1231 - 31934745-31935125,31935230-31935325,31936215-319362... 30 1.6
04_04_0819 - 28312667-28313219,28315157-28316430 30 1.6
04_03_0298 + 14080353-14080927,14081041-14081554 30 1.6
04_03_0293 - 14001443-14001956,14002070-14002644 30 1.6
11_04_0407 + 17335773-17335777,17335930-17336635,17336844-173375... 29 2.2
05_03_0468 + 14376926-14377183,14377534-14377710,14377802-143778... 29 2.2
04_04_0863 + 28847761-28848009,28848108-28848131,28849388-288494... 29 2.8
11_04_0369 - 16885918-16886080,16886235-16886671,16886767-168870... 27 8.7
11_01_0153 - 1276090-1276182,1276416-1276630,1276710-1276806,127... 27 8.7
10_08_0731 + 20161962-20163628,20163721-20163862,20164181-201644... 27 8.7
04_04_0841 - 28574497-28574883,28575815-28576188,28576262-285764... 27 8.7
01_01_0327 + 2659822-2660232,2660906-2660959 27 8.7
>02_03_0203 +
16365262-16365644,16365774-16365869,16365991-16366297,
16366417-16366664,16367201-16367438
Length = 423
Score = 32.3 bits (70), Expect = 0.31
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = -3
Query: 389 SSCSVVGPTTSS-PLGHSPA-FLVSTC*VVPAAPASISWRR 273
SSC+ VG T+S P H A F+VS PA+PA++ WRR
Sbjct: 14 SSCAAVGVATASHPHRHRQARFVVSP--PAPASPAALLWRR 52
>06_01_0232 + 1779568-1779846
Length = 92
Score = 31.5 bits (68), Expect = 0.53
Identities = 19/59 (32%), Positives = 24/59 (40%)
Frame = +1
Query: 283 EIDAGAAGTTQHVETRKAGECPKGDEVVGPTTEQLEPSRGAVVDIKHDVDRILAQHSYA 459
++ A AAGT+ K G VVGP PS A D R L Q +Y+
Sbjct: 19 DVFAYAAGTSLTAAVNKVSTASPGGRVVGPAVSAAAPSSEAKKDAAGKAPRRLLQAAYS 77
>02_01_0554 +
4083020-4083854,4083877-4083906,4084843-4084911,
4085170-4085445,4085601-4085720,4086037-4086044
Length = 445
Score = 31.5 bits (68), Expect = 0.53
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 208 ADLLAQFDSEEY--IDTLHELANSLLQEIDAGAAGTTQHVETRKAGECPKGDEV 363
A L A FD+E Y ++ L + +LL + AGA G ++ A E +GDEV
Sbjct: 164 AGLPADFDAEVYGAMEALTLVEEALLADATAGAGGAEIGEKSAAAAEVGEGDEV 217
>08_01_0246 - 2028701-2029060,2029149-2030606,2030729-2031160
Length = 749
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2
Query: 23 EVESLKALNERLISENTALREAAAAQSVPGGQGPA 127
E +L+A NE+L +EN +EA A S P GPA
Sbjct: 151 ENNALRAENEKLRAENMRYKEALANASCPNCGGPA 185
>05_04_0040 +
17429281-17429371,17429433-17430150,17431387-17431435,
17431540-17431785,17432266-17432673
Length = 503
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = +1
Query: 286 IDAGAAGTTQHVETRKAGECPKGDEVVGPTTEQLEPSRGAVVDIKHDVDRILAQHSYAHP 465
++A AG H+E + + E L+P G + D DV++ SYAH
Sbjct: 63 VEAVDAGVVAHLEQPSTPQPTSSPSIAESCKEHLKPMVGMIFDTLTDVEKF--YKSYAHE 120
Query: 466 YTHAADLLEIKEENND 513
+ + + K++N +
Sbjct: 121 AGFSVRVGQHKKQNEE 136
>08_02_0717 +
20372728-20372836,20372936-20373078,20374131-20374211,
20374307-20374510,20374789-20374796,20375153-20375245,
20375377-20375500,20375585-20375650,20375841-20375907,
20376600-20376676,20377032-20377145,20377546-20377623,
20377705-20377856,20377960-20378020,20378292-20378398,
20378497-20378562,20379099-20379177,20379671-20379967
Length = 641
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 404 APRLGSSCSVVGPTTSSPLGHSPA 333
AP LG VV P T SP+G PA
Sbjct: 18 APALGRRLPVVNPATESPIGEIPA 41
>04_04_1231 -
31934745-31935125,31935230-31935325,31936215-31936277,
31936393-31936593,31936738-31936839,31936972-31937430,
31937524-31937712,31938325-31938442,31939033-31939307,
31939853-31939930
Length = 653
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 5 NERLTSEVESLKALNERLISENTALREAAAAQSVPGGQGPA 127
N+ E L++ NE+L +EN +EA ++ S P GPA
Sbjct: 158 NQHERHENSQLRSDNEKLRAENMRYKEALSSASCPNCGGPA 198
>04_04_0819 - 28312667-28313219,28315157-28316430
Length = 608
Score = 29.9 bits (64), Expect = 1.6
Identities = 29/75 (38%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = -1
Query: 541 HSLRRICRLYRCSPL*F-REGLLRVCRDEHKSVVPVSCRRHA*CLLQHLDWVPVVLLWAP 365
H+LR + R C PL R+GL R RD + S V H + LD VL P
Sbjct: 498 HALR-LSRGEPCLPLRIARQGLSR--RDTYTSESLVVLEAHEAAVPACLDKTEAVLSTDP 554
Query: 364 PLHLL*GTLQLS-WF 323
PL GTLQ+ WF
Sbjct: 555 PLTDFQGTLQIDVWF 569
>04_03_0298 + 14080353-14080927,14081041-14081554
Length = 362
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 415 IKHDVDRILAQHSYAHPYTHAADLLEIKEENNDK 516
+K +R+ HS H Y HA DLL+ DK
Sbjct: 39 VKSQNERVKYLHSVNHAYNHAVDLLDDGSATRDK 72
>04_03_0293 - 14001443-14001956,14002070-14002644
Length = 362
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 415 IKHDVDRILAQHSYAHPYTHAADLLEIKEENNDK 516
+K +R+ HS H Y HA DLL+ DK
Sbjct: 39 VKSQNERVKYLHSVNHAYNHAVDLLDDGSATRDK 72
>11_04_0407 +
17335773-17335777,17335930-17336635,17336844-17337542,
17340710-17340724,17341479-17342126
Length = 690
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = +1
Query: 349 KGDEVVGPTTEQLEPSRGAVVDIKHDVDRILAQHSYAHPYTHAADLLEIKEENNDKGDIF 528
KG++V T+ L + +I ++ QH Y H YTH L E + N ++F
Sbjct: 426 KGEQVFDGLTKLLTAPNTTIREIAAEI----LQHVYFHDYTHRLSLTEKEASTNLVAELF 481
>05_03_0468 +
14376926-14377183,14377534-14377710,14377802-14377867,
14378009-14378134,14378499-14378678,14379015-14379179,
14380185-14380538
Length = 441
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -3
Query: 395 LGSSCSVVGPTTSSPLGHSPAFLV-STC*VVPAAPASIS 282
LG S + P T+S S + +V TC VVPA+P S+S
Sbjct: 397 LGRSVTPATPKTASSSPSSTSIVVPETCPVVPASPKSLS 435
>04_04_0863 +
28847761-28848009,28848108-28848131,28849388-28849460,
28849550-28849684,28850191-28850411,28851747-28851983
Length = 312
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -2
Query: 456 IRVLCQYPVDVMLDVYYSTSTGFQLFCCG-PHHFISFRALSSFPG 325
+RVL PV+ MLD + T +L G P+ F+ A++ F G
Sbjct: 129 VRVLGSLPVNTMLDTLHQTGRDARLIGQGNPNDFLVSAAVAEFKG 173
>11_04_0369 -
16885918-16886080,16886235-16886671,16886767-16887028,
16887050-16887353,16887771-16888166,16888531-16888579,
16889303-16889737
Length = 681
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -1
Query: 325 FRHVESFLQH-LHQFLGGGSLQVHVRCRCIPRNRIARGGL 209
F E FL L F+G L H+ C C+ NR+ G+
Sbjct: 362 FYEKEFFLSKALEGFMGSAKLLRHLHCECLLDNRLELHGI 401
>11_01_0153 -
1276090-1276182,1276416-1276630,1276710-1276806,
1276880-1277077,1277266-1277328,1277628-1277687,
1277826-1277928,1280045-1280154
Length = 312
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 245 STPYMNLQTPSSKKLMQVLQERLNMSKPGK 334
S P+ L+ PS+ L + L E+ N +KPG+
Sbjct: 234 SQPFGLLENPSNLPLGRYLAEKTNTTKPGR 263
>10_08_0731 + 20161962-20163628,20163721-20163862,20164181-20164490,
20164566-20166466,20166557-20166650,20166953-20167440,
20167919-20168599,20168870-20168944,20170148-20170210,
20170588-20170633,20171373-20171420,20171484-20171557
Length = 1862
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -2
Query: 402 TSTGFQLFCCGPHHFISFRALSSFPGFDMLSRSCSTCINFLEEGVCK 262
T+ G F G + +++ A S +D+L R S C+ F E CK
Sbjct: 1165 TNWGLDPFSRGAYSYVAVGA--SGRDYDILGRPVSDCLFFAGEATCK 1209
>04_04_0841 -
28574497-28574883,28575815-28576188,28576262-28576439,
28576816-28576896,28578134-28578361,28578460-28578579,
28578646-28579353,28579471-28579588,28579686-28579978,
28580101-28580169
Length = 851
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 35 LKALNERLISENTALREAAAAQSVPGGQGPA 127
LK N++L SEN ++REA + G GPA
Sbjct: 171 LKQENDKLRSENLSIREATSNAVCVGCGGPA 201
>01_01_0327 + 2659822-2660232,2660906-2660959
Length = 154
Score = 27.5 bits (58), Expect = 8.7
Identities = 23/63 (36%), Positives = 30/63 (47%)
Frame = -3
Query: 416 MSTTAPRLGSSCSVVGPTTSSPLGHSPAFLVSTC*VVPAAPASISWRREFASSCKVSMYS 237
+S TAP C+V S+PL A L+ T VV P + +RR ASS + S
Sbjct: 44 LSRTAPH---RCAVPMLAISTPLVLDDADLLPTTAVVTPNPLARCYRRRLASSPRTLGRS 100
Query: 236 SES 228
S S
Sbjct: 101 SAS 103
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,736,286
Number of Sequences: 37544
Number of extensions: 328034
Number of successful extensions: 1203
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1203
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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