Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24g06
(601 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 29 2.5
Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z69792-3|CAA93666.1| 284|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z47067-2|CAA87329.1| 498|Caenorhabditis elegans Hypothetical pr... 28 4.4
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 28 4.4
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z50029-1|CAA90340.2| 460|Caenorhabditis elegans Hypothetical pr... 28 5.9
AC024755-7|AAO91688.1| 833|Caenorhabditis elegans Hypothetical ... 28 5.9
AC024755-6|AAF59639.1| 877|Caenorhabditis elegans Hypothetical ... 28 5.9
AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical ... 27 7.7
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.1 bits (62), Expect = 2.5
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Frame = -3
Query: 431 STSCLMSTTAPRLGSSCSVVGPTTSSPLGHSPAFLVSTC*VVPA----APASISWRREFA 264
STS + ST SS +V PT++ SP+ V+T P+ P+S S
Sbjct: 454 STSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSST 513
Query: 263 SSCKVSMYSSESNCARRSAIGDTS 192
+S VS +S + + + T+
Sbjct: 514 ASSSVSSTASSTQSSTSTQQSSTT 537
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 29.1 bits (62), Expect = 2.5
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Frame = -3
Query: 431 STSCLMSTTAPRLGSSCSVVGPTTSSPLGHSPAFLVSTC*VVPA----APASISWRREFA 264
STS + ST SS +V PT++ SP+ V+T P+ P+S S
Sbjct: 454 STSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSST 513
Query: 263 SSCKVSMYSSESNCARRSAIGDTS 192
+S VS +S + + + T+
Sbjct: 514 ASSSVSSTASSTQSSTSTQQSSTT 537
>Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical
protein F35E2.5 protein.
Length = 575
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +2
Query: 446 NTLMLIPTHTQQTFSKSKRRTTIKATYSTQAVTXIMIASR*N 571
NT+ P T T + +KR TT KAT T T +I R N
Sbjct: 281 NTVTKPPRRTTTTRTTTKRLTTTKATLKTTTKTLPVIPPRPN 322
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +2
Query: 293 QVLQERLNMSKPGKLESALKEMKWWGPQQNNWNPVEVL**TSSMTSTGYWHNTLMLIPTH 472
+ + E +NM L+S ++ + G +N P+E+L S TS W N + L+ T
Sbjct: 202 KAIDEEVNMY----LQSESRDARIMGLHDDNSQPIEILTRILSKTSDQQWENFIGLLETI 257
Query: 473 TQQT 484
+ T
Sbjct: 258 EKST 261
>Z69792-3|CAA93666.1| 284|Caenorhabditis elegans Hypothetical
protein F40E10.5 protein.
Length = 284
Score = 28.3 bits (60), Expect = 4.4
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 232 SEEYIDTLHEL-ANSLLQEIDAGAAGTTQHVETRKAGECPKGDEVVGPTTEQLEPSRGAV 408
S+E D L ++ +S +E++A TT T E P E V TTEQ + A
Sbjct: 192 SKEIRDELKKMFISSKDKEVEATTTTTTTTTTTTTTTEAPTMPEAVSSTTEQSTTTTAAA 251
Query: 409 V 411
+
Sbjct: 252 I 252
>Z47067-2|CAA87329.1| 498|Caenorhabditis elegans Hypothetical
protein C43C3.2 protein.
Length = 498
Score = 28.3 bits (60), Expect = 4.4
Identities = 24/108 (22%), Positives = 45/108 (41%), Gaps = 2/108 (1%)
Frame = -2
Query: 510 VVLLFDFEKVCCVCVGMSIRVLCQYPVDVMLDV-YYSTSTGFQLFCCGPHHFISFRALSS 334
+++ F ++ C VC + +RV Q V V L + ++ T H + F +
Sbjct: 145 ILVAFSIDRYCAVCHPLQVRVRNQRTVFVFLGIMFFVTCVMLSPILLYAHSKVHFIITET 204
Query: 333 FPGFDMLSRSCSTCINFLEEGVCKF-M*GVDVFLGIELREEVCDRRHI 193
+ M C+ F E V F + + + ++L +EV R H+
Sbjct: 205 YRHLIM-----QKCLRFFEGSVTFFGLQELVMHEKVDLDQEVITRMHL 247
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 28.3 bits (60), Expect = 4.4
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +1
Query: 256 HELANSLLQEIDAGAAGTTQHVETRKAG-ECPKGDEVVGP--TTEQLEPSRGAVVD 414
H L S +++ G+A T HV TR+ G + G + P + L RG VVD
Sbjct: 726 HSLRQSHPRQVVRGSAPNTDHVSTRRRGRDTASGRDAPSPGIISGFLSYKRGDVVD 781
>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical
protein E01G6.1 protein.
Length = 1391
Score = 27.9 bits (59), Expect = 5.9
Identities = 23/75 (30%), Positives = 31/75 (41%)
Frame = -3
Query: 422 CLMSTTAPRLGSSCSVVGPTTSSPLGHSPAFLVSTC*VVPAAPASISWRREFASSCKVSM 243
CL S TAP CS GP S+ P V+ P P S + S C +
Sbjct: 608 CLESATAPGFHMCCS--GPLPSAQRPVRPIAPVAPMPRRPFEPDSFADLLSNISPCPPQL 665
Query: 242 YSSESNCARRSAIGD 198
+SS +C + +GD
Sbjct: 666 FSSGQSCT-VNQVGD 679
>Z50029-1|CAA90340.2| 460|Caenorhabditis elegans Hypothetical
protein ZC504.1 protein.
Length = 460
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = -2
Query: 429 DVMLDVYYSTSTGFQLFCCGPHHFISFRALSSFPGFDMLSRSCSTCINFLEEGVC 265
DV Y T+ G FCC PH I P ++S++ C N LE C
Sbjct: 131 DVCPADYVCTTQGLHSFCCSPHDAIC--PAGQQPYVHIVSKNSMKC-NPLETSSC 182
>AC024755-7|AAO91688.1| 833|Caenorhabditis elegans Hypothetical
protein Y34B4A.4b protein.
Length = 833
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 332 KLESALKEMKWWGPQQNNWNPVEVL**TSSMTSTGYWHNTLML 460
++ESA E+ WW +QN ++ T + +W TL++
Sbjct: 655 RIESA--ELLWWAQEQNEKKSKNLVNFTEQFNNLSFWVRTLII 695
>AC024755-6|AAF59639.1| 877|Caenorhabditis elegans Hypothetical
protein Y34B4A.4a protein.
Length = 877
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 332 KLESALKEMKWWGPQQNNWNPVEVL**TSSMTSTGYWHNTLML 460
++ESA E+ WW +QN ++ T + +W TL++
Sbjct: 655 RIESA--ELLWWAQEQNEKKSKNLVNFTEQFNNLSFWVRTLII 695
>AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical
protein Y39G10AR.10 protein.
Length = 690
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 8 ERLTSEVESLKALNERLISENTALRE 85
+ TSE +LK LN L++EN L+E
Sbjct: 80 QETTSEENNLKILNRDLVAENLELKE 105
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,432,421
Number of Sequences: 27780
Number of extensions: 258502
Number of successful extensions: 1058
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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