Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24f24
         (619 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77654-2|CAB01130.1|  308|Caenorhabditis elegans Hypothetical pr...    74   7e-14
U72208-1|AAD00182.1|  308|Caenorhabditis elegans inhibitor of ap...    74   7e-14
Z74045-2|CAA98553.1|  155|Caenorhabditis elegans Hypothetical pr...    68   6e-12
U85911-1|AAB94330.1|  155|Caenorhabditis elegans inhibitor of ap...    68   6e-12
Z81062-6|CAB02949.2|  320|Caenorhabditis elegans Hypothetical pr...    30   1.5  

>Z77654-2|CAB01130.1|  308|Caenorhabditis elegans Hypothetical
           protein C50B8.2 protein.
          Length = 308

 Score = 74.1 bits (174), Expect = 7e-14
 Identities = 39/110 (35%), Positives = 68/110 (61%), Gaps = 9/110 (8%)
 Frame = +3

Query: 186 SSLLFLVEERIKTFKNWPFNDKN--KCNVRNMAEAGFYSVATGVEDADAAKCFLCGKELD 359
           SS L   + R+ TF+N+ F+ K   KC  + +A+AG++S+A   +D  +AKC  C  ELD
Sbjct: 161 SSKLLTFDHRLATFQNFIFDKKRNVKCTSKKLAKAGWFSIANK-KDKTSAKCPFCLVELD 219

Query: 360 GWESTDDPWIEHKSHAAQCAFVQLGK-------KEDDLLLSENLSVIKQY 488
            ++ +DDPW EH+  +A C F++LGK       + + L+L   ++++++Y
Sbjct: 220 -FDESDDPWEEHQKFSASCDFIKLGKLDEKKWTENEALMLGARITIMQKY 268



 Score = 58.8 bits (136), Expect = 3e-09
 Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
 Frame = +3

Query: 210 ERIKTFKNWPFNDKNK--CNVRNMAEAGFYSVATGVEDADAAKCFLCGKELDGWESTDDP 383
           ER  +FK + ++ +    C    +A AGFYS A+  E   +AKC  C  E++ +E  DDP
Sbjct: 26  ERFASFKGFVYDKRINIACTSEKLARAGFYSTASP-EFPASAKCPFCMLEIN-FEQCDDP 83

Query: 384 WIEHKSHAAQCAFVQLGKKEDDLL 455
           W +HKS +  C FV +G+ E+  L
Sbjct: 84  WEKHKSGSPHCEFVMIGEIEESEL 107


>U72208-1|AAD00182.1|  308|Caenorhabditis elegans inhibitor of
           apoptosis homolog protein.
          Length = 308

 Score = 74.1 bits (174), Expect = 7e-14
 Identities = 39/110 (35%), Positives = 68/110 (61%), Gaps = 9/110 (8%)
 Frame = +3

Query: 186 SSLLFLVEERIKTFKNWPFNDKN--KCNVRNMAEAGFYSVATGVEDADAAKCFLCGKELD 359
           SS L   + R+ TF+N+ F+ K   KC  + +A+AG++S+A   +D  +AKC  C  ELD
Sbjct: 161 SSKLLTFDHRLATFQNFIFDKKRNVKCTSKKLAKAGWFSIANK-KDKTSAKCPFCLVELD 219

Query: 360 GWESTDDPWIEHKSHAAQCAFVQLGK-------KEDDLLLSENLSVIKQY 488
            ++ +DDPW EH+  +A C F++LGK       + + L+L   ++++++Y
Sbjct: 220 -FDESDDPWEEHQKFSASCDFIKLGKLDEKKWTENEALMLGARITIMQKY 268



 Score = 58.8 bits (136), Expect = 3e-09
 Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
 Frame = +3

Query: 210 ERIKTFKNWPFNDKNK--CNVRNMAEAGFYSVATGVEDADAAKCFLCGKELDGWESTDDP 383
           ER  +FK + ++ +    C    +A AGFYS A+  E   +AKC  C  E++ +E  DDP
Sbjct: 26  ERFASFKGFVYDKRINIACTSEKLARAGFYSTASP-EFPASAKCPFCMLEIN-FEQCDDP 83

Query: 384 WIEHKSHAAQCAFVQLGKKEDDLL 455
           W +HKS +  C FV +G+ E+  L
Sbjct: 84  WEKHKSGSPHCEFVMIGEIEESEL 107


>Z74045-2|CAA98553.1|  155|Caenorhabditis elegans Hypothetical
           protein T27F2.3 protein.
          Length = 155

 Score = 67.7 bits (158), Expect = 6e-12
 Identities = 38/111 (34%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
 Frame = +3

Query: 171 KMENESSLLFLVEERIKTFKNWPFN-DKN-KCNVRNMAEAGFYSVATGVEDADAAKCFLC 344
           K +++ +     ++R+ TFKN+ ++ D + KC  + +A+AGFY   TG +   + KC  C
Sbjct: 6   KKKSDMAKFTFYKDRLMTFKNFEYDRDPDAKCTSQAVAQAGFY--CTGPQ---SGKCAFC 60

Query: 345 GKELDGWESTDDPWIEHKSHAAQCAFVQLGKKED-DLLLSENLSVIKQYMI 494
            KELD ++  DDPW EH      C FV++GK +D +L +++ + + +  MI
Sbjct: 61  NKELD-FDPEDDPWYEHTKRDEPCEFVRIGKLDDSELTINDTVRLSQTAMI 110


>U85911-1|AAB94330.1|  155|Caenorhabditis elegans inhibitor of
           apoptosis homolog protein.
          Length = 155

 Score = 67.7 bits (158), Expect = 6e-12
 Identities = 38/111 (34%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
 Frame = +3

Query: 171 KMENESSLLFLVEERIKTFKNWPFN-DKN-KCNVRNMAEAGFYSVATGVEDADAAKCFLC 344
           K +++ +     ++R+ TFKN+ ++ D + KC  + +A+AGFY   TG +   + KC  C
Sbjct: 6   KKKSDMAKFTFYKDRLMTFKNFEYDRDPDAKCTSQAVAQAGFY--CTGPQ---SGKCAFC 60

Query: 345 GKELDGWESTDDPWIEHKSHAAQCAFVQLGKKED-DLLLSENLSVIKQYMI 494
            KELD ++  DDPW EH      C FV++GK +D +L +++ + + +  MI
Sbjct: 61  NKELD-FDPEDDPWYEHTKRDEPCEFVRIGKLDDSELTINDTVRLSQTAMI 110


>Z81062-6|CAB02949.2|  320|Caenorhabditis elegans Hypothetical
           protein F15A4.7 protein.
          Length = 320

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -3

Query: 314 FNTRCYAIKTCLCHISHVTLVLVIERPIFEGFDSFF 207
           F T CY      CHIS + ++L+ +R  F+  +SFF
Sbjct: 28  FVTACYLSVGLFCHISLLKIILISDRKYFKD-NSFF 62


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,066,139
Number of Sequences: 27780
Number of extensions: 227298
Number of successful extensions: 495
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 489
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)