Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24f21
(623 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125954-2|AAK68175.1| 193|Caenorhabditis elegans Hypothetical ... 29 2.0
AC006769-3|AAX22281.1| 196|Caenorhabditis elegans Hypothetical ... 29 2.0
EU068466-1|ABU49431.1| 801|Caenorhabditis elegans PRO-3 protein. 29 2.7
AL132948-40|CAD31812.3| 801|Caenorhabditis elegans Hypothetical... 29 2.7
AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical ... 29 2.7
Z81082-5|CAB03093.2| 429|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z22181-7|CAA80189.2| 62|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z36719-7|CAN86592.1| 217|Caenorhabditis elegans Hypothetical pr... 27 8.2
Z36719-2|CAA85317.2| 421|Caenorhabditis elegans Hypothetical pr... 27 8.2
U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab e... 27 8.2
AF038618-12|AAM98017.2| 397|Caenorhabditis elegans P38 map kina... 27 8.2
AF038618-11|AAM98016.1| 419|Caenorhabditis elegans P38 map kina... 27 8.2
AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical ... 27 8.2
>AF125954-2|AAK68175.1| 193|Caenorhabditis elegans Hypothetical
protein C13B7.6 protein.
Length = 193
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +2
Query: 50 ELATDSEQNVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLWDEKCAILPP 229
E EQ K L K+ G ++ +P + E+ A + + +S EKC + PP
Sbjct: 10 EKGEKDEQTAKFLHKLAENGKDRGLPDCVVAQYEKNAWEATNSDEKYKSC--EKCGMPPP 67
Query: 230 ERRDKIKSALEED 268
D K+++ E+
Sbjct: 68 PPIDGAKNSVVEE 80
>AC006769-3|AAX22281.1| 196|Caenorhabditis elegans Hypothetical
protein Y45G12C.16 protein.
Length = 196
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +2
Query: 50 ELATDSEQNVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLWDEKCAILPP 229
E EQ K L K+ G ++ +P + E+ A + + +S EKC + PP
Sbjct: 10 EKGEKDEQTAKFLHKLAENGKDRGLPDCVVAQYEKNAWEATNSDEKYKSC--EKCGMPPP 67
Query: 230 ERRDKIKSALEED 268
D K+++ E+
Sbjct: 68 PPIDGAKNSVVEE 80
>EU068466-1|ABU49431.1| 801|Caenorhabditis elegans PRO-3 protein.
Length = 801
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/58 (24%), Positives = 30/58 (51%)
Frame = +2
Query: 50 ELATDSEQNVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLWDEKCAIL 223
E+ +D+E N K LK+V + N K + +N+ER + + + + ++C ++
Sbjct: 273 EMDSDAEDNTKTLKEVMTSFRNVKKTRKREKNVERAKKMISKKKKAKKEGRSKECNLM 330
>AL132948-40|CAD31812.3| 801|Caenorhabditis elegans Hypothetical
protein Y39B6A.14 protein.
Length = 801
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/58 (24%), Positives = 30/58 (51%)
Frame = +2
Query: 50 ELATDSEQNVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLWDEKCAIL 223
E+ +D+E N K LK+V + N K + +N+ER + + + + ++C ++
Sbjct: 273 EMDSDAEDNTKTLKEVMTSFRNVKKTRKREKNVERAKKMISKKKKAKKEGRSKECNLM 330
>AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical
protein K03E5.3 protein.
Length = 368
Score = 29.1 bits (62), Expect = 2.7
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +2
Query: 74 NVKILKKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLWDEKCAILPPERRDKIKS 253
N+K VDS + + P+ N++++E + T L L + PPERR K
Sbjct: 266 NIKSWPGVDSFPHYKAVFPQWPVNLKKLEETSCLTGNGLDVL--REILRYPPERRLTAKG 323
Query: 254 ALEEDYFL 277
AL YFL
Sbjct: 324 ALSHRYFL 331
>Z81082-5|CAB03093.2| 429|Caenorhabditis elegans Hypothetical
protein F42G4.2 protein.
Length = 429
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 460 KRTKRDASIEQVEKHR*RCAGESR*NIGRTETISVESRTSSK 585
K T+R + + EK + + A + T+T+S+E RTSS+
Sbjct: 86 KATRRKERVVEKEKEQPKTATIRKKKQSATQTVSIEHRTSSE 127
>Z22181-7|CAA80189.2| 62|Caenorhabditis elegans Hypothetical
protein ZK632.9 protein.
Length = 62
Score = 27.9 bits (59), Expect = 6.2
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +1
Query: 388 ASATTEMAG*FQRTGGIPLV*LHSKRTKRDASIEQVEKHR*RCAGESR 531
+S EMA F++TGG L KRTK D +E KH + G++R
Sbjct: 2 SSTAEEMAAAFEQTGGPDLTTGSGKRTKSD-RVE--HKHASQPGGDTR 46
>Z36719-7|CAN86592.1| 217|Caenorhabditis elegans Hypothetical
protein C06C3.9 protein.
Length = 217
Score = 27.5 bits (58), Expect = 8.2
Identities = 9/21 (42%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
Frame = +3
Query: 114 TRKYHHAYV--VTWSGWKCWH 170
TR + H+ V + + GW+CWH
Sbjct: 122 TRDFSHSIVADLVYRGWQCWH 142
>Z36719-2|CAA85317.2| 421|Caenorhabditis elegans Hypothetical
protein C06C3.4 protein.
Length = 421
Score = 27.5 bits (58), Expect = 8.2
Identities = 9/21 (42%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
Frame = +3
Query: 114 TRKYHHAYV--VTWSGWKCWH 170
TR + H+ V + + GW+CWH
Sbjct: 131 TRDFSHSIVADLVYRGWQCWH 151
>U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab
effector) protein 5 protein.
Length = 414
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 423 LKLTSHFCRC*SSFCLSINSLRFTVPPGPDQR 328
+K+ H C FC+ N L+ TVP GP+ R
Sbjct: 360 VKVKPHCLHCGRIFCM--NCLKDTVPSGPNHR 389
>AF038618-12|AAM98017.2| 397|Caenorhabditis elegans P38 map kinase
family protein 2,isoform b protein.
Length = 397
Score = 27.5 bits (58), Expect = 8.2
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +2
Query: 92 KVDSEGSNQKIP---PRLRRNMERVEMLARPTARRLRSLWDEKCAILPPERRDKIKSALE 262
K+ SE + I P +R++ + +A P A L E IL P+RR + SAL
Sbjct: 274 KIQSEEARNYIKNRSPIIRQDFVTLFPMASPYALELL----EMMLILDPDRRISVSSALR 329
Query: 263 EDY 271
DY
Sbjct: 330 HDY 332
>AF038618-11|AAM98016.1| 419|Caenorhabditis elegans P38 map kinase
family protein 2,isoform a protein.
Length = 419
Score = 27.5 bits (58), Expect = 8.2
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +2
Query: 92 KVDSEGSNQKIP---PRLRRNMERVEMLARPTARRLRSLWDEKCAILPPERRDKIKSALE 262
K+ SE + I P +R++ + +A P A L E IL P+RR + SAL
Sbjct: 291 KIQSEEARNYIKNRSPIIRQDFVTLFPMASPYALELL----EMMLILDPDRRISVSSALR 346
Query: 263 EDY 271
DY
Sbjct: 347 HDY 349
>AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical
protein F52G3.1 protein.
Length = 1172
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1
Query: 209 FRPIKSAGDEPLAVPTFPPAP 147
F+P+ + GD PL PT P+P
Sbjct: 861 FQPLFNTGDAPLLYPTAAPSP 881
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,756,397
Number of Sequences: 27780
Number of extensions: 315912
Number of successful extensions: 1089
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1089
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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