Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24f19
(627 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006747-1|AAF60509.1| 311|Caenorhabditis elegans Hypothetical ... 81 6e-16
U58746-8|AAB00629.1| 339|Caenorhabditis elegans Hypothetical pr... 71 7e-13
AC024800-4|AAF60722.1| 514|Caenorhabditis elegans Hypothetical ... 71 7e-13
AC006769-12|AAF60591.1| 384|Caenorhabditis elegans Hypothetical... 71 7e-13
AL033514-10|CAE47472.1| 436|Caenorhabditis elegans Hypothetical... 30 1.2
AL033514-9|CAA22098.1| 605|Caenorhabditis elegans Hypothetical ... 30 1.2
Z37093-1|CAA85467.1| 264|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z81050-2|CAB02852.1| 526|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z73899-4|CAA98076.1| 400|Caenorhabditis elegans Hypothetical pr... 27 8.3
>AC006747-1|AAF60509.1| 311|Caenorhabditis elegans Hypothetical
protein Y39A3A.1 protein.
Length = 311
Score = 81.0 bits (191), Expect = 6e-16
Identities = 51/148 (34%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
Frame = +2
Query: 185 DFLCRFVTTDETWVHYYTPESKIQSKQWTHSKWSAPKKAMAVKSAG*VMGSIFWDADGIL 364
D++ T DE WV Y K KQW + A V+ SI+WD+ G++
Sbjct: 116 DWVKDITTGDEKWVLYVNHTRK---KQWVPVEEHAEPDLKGELHEKKVLLSIWWDSMGVI 172
Query: 365 MIDYLPKGQKINGEYYANLLDNLHQCIQ*KQPGMAKKK--HLPP*GHTCVKAMAKINELK 538
+ LP G IN + Y L+ + Q +P +K H HT +K K+ L
Sbjct: 173 FRELLPDGATINADLYCIQLEKVVHAHQLHRPRGSKLLLLHDNARPHTALKTRQKLQTLG 232
Query: 539 *DLLPHLPYSPDLAPSDFHLFPKLKTFL 622
++LPH PYSPDLAP+D+HLF L+ L
Sbjct: 233 IEVLPHPPYSPDLAPTDYHLFRSLQNHL 260
>U58746-8|AAB00629.1| 339|Caenorhabditis elegans Hypothetical
protein R05G6.2 protein.
Length = 339
Score = 70.9 bits (166), Expect = 7e-13
Identities = 47/148 (31%), Positives = 66/148 (44%)
Frame = +2
Query: 179 KPDFLCRFVTTDETWVHYYTPESKIQSKQWTHSKWSAPKKAMAVKSAG*VMGSIFWDADG 358
K D+L VT DE WV Y K Q PK + K +M ++W G
Sbjct: 145 KFDWLNNLVTGDEKWVLYVNHSRKRQWLPIGEKGIPTPKPDLHPKK---IMICVWWGVQG 201
Query: 359 ILMIDYLPKGQKINGEYYANLLDNLHQCIQ*KQPGMAKKKHLPP*GHTCVKAMAKINELK 538
+ + LP + I +YY LD + + K + H H K K+ +L
Sbjct: 202 PVHWELLPTNKTITADYYCAQLDRVAEKTNGKYEKLYFL-HDNARPHVAKKTFQKLQDLG 260
Query: 539 *DLLPHLPYSPDLAPSDFHLFPKLKTFL 622
+LPH PYSPDLAP+D+HLF L ++
Sbjct: 261 WTVLPHPPYSPDLAPTDYHLFLSLSDYM 288
>AC024800-4|AAF60722.1| 514|Caenorhabditis elegans Hypothetical
protein Y49F6A.4 protein.
Length = 514
Score = 70.9 bits (166), Expect = 7e-13
Identities = 47/148 (31%), Positives = 66/148 (44%)
Frame = +2
Query: 179 KPDFLCRFVTTDETWVHYYTPESKIQSKQWTHSKWSAPKKAMAVKSAG*VMGSIFWDADG 358
K D+L VT DE WV Y K Q PK + K +M ++W G
Sbjct: 120 KFDWLNNLVTGDEKWVLYVNHSRKRQWLPIGEKGIPTPKPDLHPKK---IMICVWWGVQG 176
Query: 359 ILMIDYLPKGQKINGEYYANLLDNLHQCIQ*KQPGMAKKKHLPP*GHTCVKAMAKINELK 538
+ + LP + I +YY LD + + K + H H K K+ +L
Sbjct: 177 PVHWELLPTNKTITADYYCAQLDRVAEKTNGKYEKLYFL-HDNARPHVAKKTFQKLQDLG 235
Query: 539 *DLLPHLPYSPDLAPSDFHLFPKLKTFL 622
+LPH PYSPDLAP+D+HLF L ++
Sbjct: 236 WTVLPHPPYSPDLAPTDYHLFLSLSDYM 263
>AC006769-12|AAF60591.1| 384|Caenorhabditis elegans Hypothetical
protein Y45G12C.13 protein.
Length = 384
Score = 70.9 bits (166), Expect = 7e-13
Identities = 47/148 (31%), Positives = 66/148 (44%)
Frame = +2
Query: 179 KPDFLCRFVTTDETWVHYYTPESKIQSKQWTHSKWSAPKKAMAVKSAG*VMGSIFWDADG 358
K D+L VT DE WV Y K Q PK + K +M ++W G
Sbjct: 145 KFDWLNNLVTGDEKWVLYVNHSRKRQWLPIGEKGIPTPKPDLHPKK---IMICVWWGVQG 201
Query: 359 ILMIDYLPKGQKINGEYYANLLDNLHQCIQ*KQPGMAKKKHLPP*GHTCVKAMAKINELK 538
+ + LP + I +YY LD + + K + H H K K+ +L
Sbjct: 202 PVHWELLPTNKTITADYYCAQLDRVAEKTNGKYEKLYFL-HDNARPHVAKKTFQKLQDLG 260
Query: 539 *DLLPHLPYSPDLAPSDFHLFPKLKTFL 622
+LPH PYSPDLAP+D+HLF L ++
Sbjct: 261 WTVLPHPPYSPDLAPTDYHLFLSLSDYM 288
>AL033514-10|CAE47472.1| 436|Caenorhabditis elegans Hypothetical
protein Y75B8A.9b protein.
Length = 436
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/106 (23%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Frame = +2
Query: 131 DSGAILKRMLGP-FQSNKPDFLCRFVTTDETWVHYYTPESKIQSKQWTHSKWSAPKKAMA 307
+S ++L RM+ F KP+ L + D++ + I+ ++ +W K
Sbjct: 170 ESPSVLIRMVNSIFDRTKPEHLHEILLVDDSSEWSNATDEAIKYREKHIIQWEKVKFLKT 229
Query: 308 VKSAG*VMGSIFW--DADGILMIDYLPKGQKINGEYYANLLDNLHQ 439
K+ G + IF A+G +++ +L ++N E+ LLD + Q
Sbjct: 230 DKNEGLIRAKIFGARRANGEVLV-FLDSHCEVNEEWLPPLLDQIKQ 274
>AL033514-9|CAA22098.1| 605|Caenorhabditis elegans Hypothetical
protein Y75B8A.9a protein.
Length = 605
Score = 30.3 bits (65), Expect = 1.2
Identities = 25/106 (23%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Frame = +2
Query: 131 DSGAILKRMLGP-FQSNKPDFLCRFVTTDETWVHYYTPESKIQSKQWTHSKWSAPKKAMA 307
+S ++L RM+ F KP+ L + D++ + I+ ++ +W K
Sbjct: 170 ESPSVLIRMVNSIFDRTKPEHLHEILLVDDSSEWSNATDEAIKYREKHIIQWEKVKFLKT 229
Query: 308 VKSAG*VMGSIFW--DADGILMIDYLPKGQKINGEYYANLLDNLHQ 439
K+ G + IF A+G +++ +L ++N E+ LLD + Q
Sbjct: 230 DKNEGLIRAKIFGARRANGEVLV-FLDSHCEVNEEWLPPLLDQIKQ 274
>Z37093-1|CAA85467.1| 264|Caenorhabditis elegans Hypothetical
protein ZK669.2 protein.
Length = 264
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 82 SYRPVGCRDCLRTIKTGFGCNTQ 150
+Y P G C R+ +TG CN Q
Sbjct: 111 TYHPFGLASCRRSAETGIRCNCQ 133
>Z81050-2|CAB02852.1| 526|Caenorhabditis elegans Hypothetical
protein C50B6.3 protein.
Length = 526
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = +3
Query: 36 KERVHHIVSEELN----MKKLSARWVPRLLTHDQNRIRVQY 146
+ERV ++V E + + +LSA PR+LT DQ + QY
Sbjct: 437 QERVRNMVYEAYDNIYHINRLSANEGPRILTSDQKLVMQQY 477
>Z73899-4|CAA98076.1| 400|Caenorhabditis elegans Hypothetical
protein ZK829.6 protein.
Length = 400
Score = 27.5 bits (58), Expect = 8.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 324 YPADFTAMAFFGADHFECVH 265
+P D +F GAD F+CV+
Sbjct: 246 FPVDLVICSFLGADMFDCVY 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,215,276
Number of Sequences: 27780
Number of extensions: 330594
Number of successful extensions: 761
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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