Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24f19
         (627 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    88   8e-20
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          56   3e-10
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          56   4e-10
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   1.8  
U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              23   2.4  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    23   3.2  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   4.3  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    22   5.6  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   5.6  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    21   9.8  

>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 87.8 bits (208), Expect = 8e-20
 Identities = 55/154 (35%), Positives = 78/154 (50%), Gaps = 5/154 (3%)
 Frame = +2

Query: 176 NKPDFLCRFVTTDETWVHYYTPESKIQSKQWTHSKWSAPKKAMAVKSAG*VMGSIFWDAD 355
           N P FL R +T DE WV Y   + K   + W+  +  A   + A      V+ S++WD  
Sbjct: 142 NDP-FLKRLITGDEKWVVYNNIKRK---RSWSRPREPAQTTSKAGIHRKKVLLSVWWDYK 197

Query: 356 GILMIDYLPKGQKINGEYYANLLDNLHQCIQ*KQPGMAKKK-----HLPP*GHTCVKAMA 520
           GI+  + LP  + IN   Y   L  L+  ++ K+P +  +K     H     HT +    
Sbjct: 198 GIVYFELLPPNRTINSVVYIEQLTKLNNAVEEKRPELTNRKGVVFHHDNARPHTSLVTRQ 257

Query: 521 KINELK*DLLPHLPYSPDLAPSDFHLFPKLKTFL 622
           K+ EL  D+LPH PYSPDLAPSD+ LF  L+  L
Sbjct: 258 KLLELGWDVLPHPPYSPDLAPSDYFLFRSLQNSL 291


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 56.0 bits (129), Expect = 3e-10
 Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 10/139 (7%)
 Frame = +2

Query: 176 NKPDFLCRFVTTDETWVHYYTPESKIQSKQWTHSKWSAPKK-AMAVKSAG*----VMGSI 340
           N P FL R +T DE WV      + I+ K+W    WS P++ A     AG     V+ S+
Sbjct: 21  NDP-FLKRPITGDEKWV-----VNNIKRKRW----WSRPREPAQTTSKAGIHRKKVLLSV 70

Query: 341 FWDADGILMIDYLPKGQKINGEYYANLLDNLHQCIQ*KQPGMAKKK-----HLPP*GHTC 505
           +WD  GI+  + L   + IN   Y   L  L+  ++ K+P +  +K     H     HT 
Sbjct: 71  WWDYKGIVYFELLSPNRTINSVVYIEQLTKLNNAVEEKRPELTNRKSVVFHHDNARPHTS 130

Query: 506 VKAMAKINELK*DLLPHLP 562
           +    K+ EL  D+LPH P
Sbjct: 131 LVTRQKLLELGWDVLPHPP 149


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 55.6 bits (128), Expect = 4e-10
 Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 5/134 (3%)
 Frame = +2

Query: 170 QSNKPDFLCRFVTTDETWVHYYTPESKIQSKQWTHSKWSAPKKAMAVKSAG*VMGSIFWD 349
           +S    FL R +T DE WV Y   + K   + W+  + SA   + A      V+  ++WD
Sbjct: 18  RSENDPFLKRLITGDEKWVVYNNIKRK---RSWSRPRESAQTTSKAGIHRKKVLLLVWWD 74

Query: 350 ADGILMIDYLPKGQKINGEYYANLLDNLHQCIQ*KQPGMAKKK-----HLPP*GHTCVKA 514
             GI+  + LP  + IN   Y   L  L+  I+ K+  +  +K     H     HT +  
Sbjct: 75  HKGIVYFELLPPNRTINSVVYIEHLTKLNNAIEEKRFELTNRKGVVFHHDDARPHTYLVT 134

Query: 515 MAKINELK*DLLPH 556
             K+ EL  D+LPH
Sbjct: 135 RQKLLELGWDVLPH 148


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 230 NEPMFHLLSQIDIKNRVYYSETVQA 156
           N  + HL+   DI  R++  ET++A
Sbjct: 460 NVSLLHLIFPPDIAKRLWLGETIEA 484


>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 305 PWPFLEPTISNASTVLIEFLILACNN 228
           P  F+  T+S  +TV   F ++ C N
Sbjct: 100 PLTFVNDTVSFTTTVSARFWLMDCRN 125


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 338 IFWDADGILMIDY 376
           + W ADG +M+DY
Sbjct: 250 VSWRADGQIMVDY 262


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -2

Query: 221 MFHLLSQIDIKNRVYYSETVQAFF*VLHPNPV 126
           M+ L   +  +NRVY  ET+   + V+   PV
Sbjct: 452 MYSLFDTLTERNRVYKVETIGDAYMVVSGAPV 483


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 301 HGCKVGWISHGFHLLGCRWDLD 366
           H  +V W+SHG     C  D++
Sbjct: 115 HTGEVVWLSHGIFRSSCDIDVE 136


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 248 LILACNNEPMFHLLSQIDIKNRVYYSETVQA 156
           LI+  N++  FH L+     N + YSE   A
Sbjct: 214 LIIYQNSDDSFHRLTSKTFDNDLRYSELAVA 244


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 311 LQPWPFLEPTISNASTVLIEFLILACNNE 225
           +Q W     T S+A+T+ I F  L  NN+
Sbjct: 351 MQAWMTALGTASSAATLPITFRCLEENNK 379


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,754
Number of Sequences: 438
Number of extensions: 4062
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)