Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24f17
         (568 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28735-5|AAF99955.3|  279|Caenorhabditis elegans Hypothetical pr...    31   0.76 
U40427-2|AAA81468.2|  159|Caenorhabditis elegans Hypothetical pr...    30   1.0  
AL132858-2|CAB60476.2|  821|Caenorhabditis elegans Hypothetical ...    30   1.0  
Z77654-3|CAB01129.1|  340|Caenorhabditis elegans Hypothetical pr...    29   1.8  
Z68006-5|CAE17869.1|   97|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AF022973-10|AAC25795.2| 1143|Caenorhabditis elegans Hypothetical...    28   4.1  
U29488-8|AAA68777.1|  320|Caenorhabditis elegans Hypothetical pr...    27   7.1  
U97008-13|AAB52303.1|  335|Caenorhabditis elegans Serpentine rec...    27   9.4  
AL117207-16|CAH60778.1|  402|Caenorhabditis elegans Hypothetical...    27   9.4  
AC024880-6|AAF60912.1|  547|Caenorhabditis elegans Hypothetical ...    27   9.4  

>U28735-5|AAF99955.3|  279|Caenorhabditis elegans Hypothetical
           protein F48E3.4 protein.
          Length = 279

 Score = 30.7 bits (66), Expect = 0.76
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = +2

Query: 329 LLNVEYDDDDYKILFMKINTNRTGDIEWDDL 421
           +L+++   D   ++F ++N+N TG + WDD+
Sbjct: 171 VLDLDVHADTENLMFSEVNSNSTGRVCWDDI 201


>U40427-2|AAA81468.2|  159|Caenorhabditis elegans Hypothetical
           protein F43C9.2 protein.
          Length = 159

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
 Frame = +2

Query: 242 ITDMLKIKEAFQA----NMNKMLPNEFRNLLRTLLNVEYDDDDYKILFMKINTNRTGDIE 409
           + D L++ E F         ++  NE   LLRT+ NVE    +   +F +++T++TG I 
Sbjct: 18  VLDDLQLSETFDLLDVDKDGRLSRNEIAALLRTI-NVEPTRVELDFIFGEMDTDKTGKIS 76

Query: 410 WDDLVSHL 433
            ++ V+++
Sbjct: 77  KEEFVNYM 84


>AL132858-2|CAB60476.2|  821|Caenorhabditis elegans Hypothetical
            protein Y113G7A.3 protein.
          Length = 821

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 27/128 (21%), Positives = 48/128 (37%), Gaps = 3/128 (2%)
 Frame = +2

Query: 23   HTFFSENVLKIIKCNTRASSCYFAYGFQFTVHTEMANESDVKSIMTFSTKSEASTAL--- 193
            H  FSENVL+     T      F+Y F       + + S + +             +   
Sbjct: 663  HILFSENVLE---STTMIQPVLFSYSFNGPPEPVLLDTSSILADRILLMDDYFHVLIYHG 719

Query: 194  QNISRWKNAPLHERCTITDMLKIKEAFQANMNKMLPNEFRNLLRTLLNVEYDDDDYKILF 373
            Q I++W+    HE        ++ EA  A+   +L   F   +   +  E++    + L 
Sbjct: 720  QTIAQWRKQNFHENPQYATFKQLLEAPVADATSILQERFP--MPRYIVTEHEGSQARFLL 777

Query: 374  MKINTNRT 397
             K+N + T
Sbjct: 778  SKVNPSLT 785


>Z77654-3|CAB01129.1|  340|Caenorhabditis elegans Hypothetical
           protein C50B8.3 protein.
          Length = 340

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 19/61 (31%), Positives = 31/61 (50%)
 Frame = +2

Query: 254 LKIKEAFQANMNKMLPNEFRNLLRTLLNVEYDDDDYKILFMKINTNRTGDIEWDDLVSHL 433
           +K+++    N  K L +++RN    LL V  D   YKI+   +++  + D  W D  SH 
Sbjct: 197 MKLEDRKAFNRKKFL-SKWRNFSHLLLKVRGDGRSYKIM---LHSPLSMDFTWGDSFSHP 252

Query: 434 L 436
           L
Sbjct: 253 L 253


>Z68006-5|CAE17869.1|   97|Caenorhabditis elegans Hypothetical
           protein K09C8.7 protein.
          Length = 97

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -1

Query: 253 HVCNGTTFMERCILPTTYVLKRCACFRLSRKSHY 152
           H+C   TF  +C+ P  Y   +C  FR +  + Y
Sbjct: 57  HICGFNTFTRKCMDPEGYCPGKCMNFRYTYNTLY 90


>AF022973-10|AAC25795.2| 1143|Caenorhabditis elegans Hypothetical
            protein F25G6.2 protein.
          Length = 1143

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
 Frame = +2

Query: 179  ASTALQNISRWKNAP---LHERCTITDMLKIKEAFQANM 286
            AS A++ + +W+N P   LH   T+    K  E+F AN+
Sbjct: 983  ASQAIEAVFKWENVPFLFLHSLYTLFHKFKTFESFVANL 1021


>U29488-8|AAA68777.1|  320|Caenorhabditis elegans Hypothetical
           protein C56C10.9 protein.
          Length = 320

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +2

Query: 335 NVEYDDDDYKILFMKINTNRTGDIEWDDLVSH 430
           ++E   +D +I F  ++TN+ G I W++   H
Sbjct: 98  HLEKSKNDSEIFFDIVDTNKDGSIVWEEFEPH 129


>U97008-13|AAB52303.1|  335|Caenorhabditis elegans Serpentine
           receptor, class j protein14 protein.
          Length = 335

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
 Frame = +2

Query: 302 NEFRNLLRTLLNVEYDDDDYKILFMKI----NTNRTGDIEWDDLVSHLLLGYFA 451
           +E R+ +RT    EYD D Y I F+       +N T +  W  +     +  FA
Sbjct: 161 DEIRDYIRTTFRDEYDVDSYDIAFVAALYIDGSNETKNKSWAGIFLLFSISSFA 214


>AL117207-16|CAH60778.1|  402|Caenorhabditis elegans Hypothetical
           protein Y60A3A.24 protein.
          Length = 402

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = +2

Query: 290 KMLPNEFRNLLRTLLNVEYDDDDYKILFMKINTNRTGDIEWDDLVS 427
           K +  E  N+  +    +Y+D DY+ +F K   ++    EWD  +S
Sbjct: 256 KKIEKEIENISESKKAEKYNDKDYQKIFQK---HKIAKDEWDKTIS 298


>AC024880-6|AAF60912.1|  547|Caenorhabditis elegans Hypothetical
           protein Y97E10AR.4 protein.
          Length = 547

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +2

Query: 332 LNVEYDDDDYKILFMKINTNRTGDIEWDDLVSHLLL 439
           +NV+Y+D+D K+  +    + +   E +DLV  L+L
Sbjct: 498 VNVKYEDNDVKLSLVSNGDDNSDVKEIEDLVEDLIL 533


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,854,749
Number of Sequences: 27780
Number of extensions: 258593
Number of successful extensions: 736
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)