Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24f16
(615 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 65 9e-12
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 61 1e-10
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 48 1e-06
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 44 2e-05
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi... 37 0.003
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 36 0.004
SPAC7D4.11c |sec39||secretory pathway protein Sec39 |Schizosacch... 29 0.53
SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces... 27 1.6
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 27 1.6
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 27 2.2
SPAC11H11.01 |sst6|cps23|ESCRT I complex subunit Vps23|Schizosac... 26 3.8
SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyc... 25 8.7
SPCC285.14 |||TRAPP complex subunit Trs130 |Schizosaccharomyces ... 25 8.7
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 64.9 bits (151), Expect = 9e-12
Identities = 29/71 (40%), Positives = 48/71 (67%)
Frame = +1
Query: 397 ELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETV 576
ELK + N+ +K+G ++A+ YT+AI++D N IL+SNRS A LK + + L++ DA++ +
Sbjct: 7 ELKNEANKFLKEGHIVQAIDLYTKAIELDSTNAILYSNRSLAHLKSEDYGLAINDASKAI 66
Query: 577 RLQPXWAKGLF 609
P +AK F
Sbjct: 67 ECDPEYAKAYF 77
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 60.9 bits (141), Expect = 1e-10
Identities = 29/70 (41%), Positives = 42/70 (60%)
Frame = +1
Query: 394 EELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANET 573
EELK KGN + A+ ++TQAI +D N+IL+SNRS + + +L+DA +
Sbjct: 3 EELKAKGNAAFSKKDYKTAIDYFTQAIGLDERNHILYSNRSACYASEKDYADALKDATKC 62
Query: 574 VRLQPXWAKG 603
L+P WAKG
Sbjct: 63 TELKPDWAKG 72
Score = 54.0 bits (124), Expect = 2e-08
Identities = 26/73 (35%), Positives = 40/73 (54%)
Frame = +1
Query: 382 PTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQD 561
P EE ++KGNE K G F A+ YT+ K P++ NR+ A+LK+ ++D
Sbjct: 396 PDKAEESRVKGNELFKSGDFANAIKEYTEMTKRAPSDPRGFGNRAAAYLKVMAPAECIRD 455
Query: 562 ANETVRLQPXWAK 600
N+ + L P +AK
Sbjct: 456 CNKAIELDPNFAK 468
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 47.6 bits (108), Expect = 1e-06
Identities = 23/69 (33%), Positives = 44/69 (63%)
Frame = +1
Query: 394 EELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANET 573
E+LK++GN + + +A+ YT+AI++DP + + +SNR+ A+ +L Q +++DA
Sbjct: 84 EKLKLEGNNAIAAKDYQKALDLYTKAIEIDPTSPVYYSNRAAAYNQLGQFENAVEDALTC 143
Query: 574 VRLQPXWAK 600
+ L P A+
Sbjct: 144 LSLDPHHAR 152
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 43.6 bits (98), Expect = 2e-05
Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Frame = +1
Query: 343 CLLKNTIMDEAKKPTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNN----YILHSN 510
C T+ + +K +E K +GN+ + G + +A Y++A+++DP+N L+ N
Sbjct: 210 CTTAKTLFKQVRK---LENTKNQGNDLFRQGNYQDAYEKYSEALQIDPDNKETVAKLYMN 266
Query: 511 RSFAFLKLDQHYLSLQDANETVRLQPXWAKGL 606
R+ L+L + +L D++ + + + KGL
Sbjct: 267 RATVLLRLKRPEEALSDSDNALAIDSSYLKGL 298
Score = 43.2 bits (97), Expect = 3e-05
Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = +1
Query: 394 EELKIKGNECVKDGKFIEAVLHYTQAIKM--DPNNYILHSNRSFAFLKLDQHYLSLQDAN 567
E+ K GN K+ K+ EA+ YT+AI + D I +SNR+ ++++ + L+L DA
Sbjct: 24 EKQKAIGNAFYKEKKYAEAIKAYTEAIDLGSDSALAIYYSNRAATYMQIGEFELALCDAK 83
Query: 568 ETVRLQP 588
++ R++P
Sbjct: 84 QSDRIKP 90
>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
Tom70|Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 36.7 bits (81), Expect = 0.003
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +1
Query: 364 MDEAKKPTTVEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYILHSNRSFAFLKLDQH 543
M + ++ ELK GN+ ++ A+ +YTQAI ++ I SNR+ + +
Sbjct: 142 MTKEERAKLAAELKTLGNKAYGQKEYANAIDYYTQAITCS-HDPIFFSNRAACYAAIGDF 200
Query: 544 YLSLQDANETVRLQPXWAKGL 606
++D +E + L + K L
Sbjct: 201 EQVIKDTSEALSLDSSYVKAL 221
>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 697
Score = 36.3 bits (80), Expect = 0.004
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +1
Query: 391 VEELKIKGNECVKDGKFIEAVLHYTQAIKMDPNNYI----LHSNRSFAFLKLDQHYLSLQ 558
VEE + GNE + G F +A+ +T ++ P + L SNRS + K+ LQ
Sbjct: 412 VEEQQSTGNELFRKGDFSQAIEEFTNSLSQLPAKHTKRVPLLSNRSLCYQKVGDLKTCLQ 471
Query: 559 DANETV 576
D +E V
Sbjct: 472 DVDELV 477
>SPAC7D4.11c |sec39||secretory pathway protein Sec39
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 769
Score = 29.1 bits (62), Expect = 0.53
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Frame = +1
Query: 322 IVSS*TFCLLKNTIMDEAKKPTTVE---ELKIKGNECVKDGKFIEAVLHYTQAIKMDPNN 492
+VS T + +++E T VE KIK E ++D F E + DP N
Sbjct: 663 VVSYWTDFQSNSKVLEENLNTTDVEFHSSKKIKDYEDLEDANFDEEWSKAADLMSDDPEN 722
Query: 493 YILHSNRSFAFLKLDQHYLSLQDANETVRLQPXWAKGL 606
+L+ + L L++ S+ D N T ++ GL
Sbjct: 723 QVLYEGNLNSSLSLNED-PSVSDENLTQKVTSKLTNGL 759
>SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1485
Score = 27.5 bits (58), Expect = 1.6
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = +1
Query: 343 CLLKNTIMDEAKKPTTVEELKIKGNECVKDGKFIEAV 453
C ++N D K T ++ G++C KF++A+
Sbjct: 411 CQIENPSFDSQTKETLTTKVSAFGSQCTLSDKFLKAI 447
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 27.5 bits (58), Expect = 1.6
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 10/58 (17%)
Frame = +1
Query: 439 FIEAVLHYTQAIKMDPNN--------YILHSNRSF--AFLKLDQHYLSLQDANETVRL 582
+I+A+ Y QAIK DP N IL NR F A L L + +++DA + +
Sbjct: 650 YIKAIQSYDQAIKFDPKNAHAAQGIAIILAQNRQFSKALLILSKVREAIKDATTLINI 707
>SPBC725.07 |pex5||peroxisomal targeting signal receptor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 27.1 bits (57), Expect = 2.2
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +1
Query: 460 YTQAIKMDPNNYILHSNRSFAFLKLDQHYLSLQDANETVRLQPXWAK 600
+ QA++ +P+N IL + A +++ ++ N V LQP + +
Sbjct: 461 FRQALQDEPSNEILWNKLGAALTNAEKNTEAVSSYNRAVSLQPQYVR 507
>SPAC11H11.01 |sst6|cps23|ESCRT I complex subunit
Vps23|Schizosaccharomyces pombe|chr 1|||Manual
Length = 487
Score = 26.2 bits (55), Expect = 3.8
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +3
Query: 375 QETDDSGGVKNKRKRMRQRWKIHRSCFTLYTSYQNGSKQ 491
Q D+ GG + Q WK RS F +Y Q KQ
Sbjct: 96 QLLDEKGGKHKYTSLLLQLWKNERSVFNIYRLVQALIKQ 134
>SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 358
Score = 25.0 bits (52), Expect = 8.7
Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = +1
Query: 370 EAKKPTTVEELKIKGNECVKDGKFIEAVLHYTQAIKM---DPNNYI-LHSNRSFAFLKLD 537
E + + + GNEC ++ +A YT+A+ D + I +SNR+ L +
Sbjct: 57 EGEPHEVAQNFREHGNECFASKRYKDAEEFYTKALAQKCGDKDIEIACYSNRAACNLLFE 116
Query: 538 QHYLSLQDANETVRLQPXWAKGLF 609
+ L D + ++ AK +
Sbjct: 117 NYRQVLNDCAQVLQRDSTHAKAYY 140
>SPCC285.14 |||TRAPP complex subunit Trs130 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1150
Score = 25.0 bits (52), Expect = 8.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 182 QGLLNLNSALFNKFVQYSLSL 244
Q LL L S+ FN+FVQ +L +
Sbjct: 338 QALLFLTSSFFNEFVQNNLEI 358
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,362,373
Number of Sequences: 5004
Number of extensions: 45405
Number of successful extensions: 139
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 137
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 269634532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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