Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24f14
         (673 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   3.8  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          24   5.0  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   5.0  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   5.0  
AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.     24   5.0  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   8.8  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +3

Query: 180  DILLGRKHNLHGRFPPLMSPRSVPTPEIPRG-PDNQYSK 293
            + L+G    + G     M P + P P  P G P +Q+S+
Sbjct: 1249 EYLMGSTQAIAGLAQGSMGPHTPPPPNTPNGMPTHQHSQ 1287


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +2

Query: 332 STNSGTCSGRSAHEPRSNKESTA 400
           S NSGT  G +A    SN  STA
Sbjct: 361 SANSGTGGGTAAPSSGSNANSTA 383


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 289 EYWLSGPRGISG 254
           E WL+GP+GI G
Sbjct: 304 ELWLTGPQGIMG 315


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 289 EYWLSGPRGISG 254
           E WL+GP+GI G
Sbjct: 304 ELWLTGPQGIMG 315


>AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.
          Length = 392

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -3

Query: 374 VHGRTFRYRCHYWWKHRIYCASFIIIL 294
           +  RT R + H+ W     CA  +++L
Sbjct: 59  IGNRTIRLQVHFTWVLAALCAFLLLVL 85


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 22/81 (27%), Positives = 30/81 (37%)
 Frame = +3

Query: 177 RDILLGRKHNLHGRFPPLMSPRSVPTPEIPRGPDNQYSKQYYYKRSAINSVFPPIVAPVA 356
           RD+L        G   P  SPR  PTP   R       +Q   +R+      P      A
Sbjct: 181 RDVLNSLLAAKVGGGQPSASPRQPPTPLPRRSSAQPQQQQQQQQRNQHEQEQPRASTSRA 240

Query: 357 EGPPMNQDPTKKAQPGGIKPD 419
             PP ++  T  A  G + P+
Sbjct: 241 VMPPRSEALT--AVRGDVVPE 259


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 721,054
Number of Sequences: 2352
Number of extensions: 16490
Number of successful extensions: 30
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)