Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24f07
(504 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0248 + 16413295-16414394,16416511-16416762,16416839-164170... 30 0.92
10_08_0374 - 17312430-17312513,17312794-17313029,17313081-173132... 30 0.92
03_05_0371 + 23570246-23570359,23570499-23570575,23570600-235706... 30 0.92
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 30 1.2
09_06_0320 - 22297579-22297760,22298433-22299358,22299422-222997... 29 1.6
07_03_1287 + 25510813-25510862,25511326-25511504,25511715-255120... 28 3.7
06_03_0541 - 21944696-21944851,21944939-21945142,21945438-219474... 28 3.7
08_01_0976 - 9825000-9825288,9827206-9827600 28 4.9
07_03_0395 + 17644813-17644921,17644961-17645084,17645545-176462... 28 4.9
08_02_1267 + 25728324-25728407,25728436-25728502,25728753-257288... 27 8.6
06_03_0014 - 15403508-15403648,15404091-15404204,15404253-154043... 27 8.6
06_02_0254 - 13517352-13517557,13517612-13519073 27 8.6
06_01_0238 + 1815258-1815581,1816286-1816530,1816612-1816765,181... 27 8.6
04_03_0682 - 18639685-18639797,18639997-18640030,18640286-186404... 27 8.6
>12_02_0248 +
16413295-16414394,16416511-16416762,16416839-16417055,
16417216-16417353,16417493-16417669,16417744-16417851,
16417925-16418392,16418493-16418570,16418673-16418756
Length = 873
Score = 30.3 bits (65), Expect = 0.92
Identities = 25/88 (28%), Positives = 45/88 (51%)
Frame = +2
Query: 218 RNAEDQQQLADRILGECKRVREETGERSEIMKATSDRRIEERIGDIEFNKSELQIQRKEI 397
R +++++ +R E R RE+ ER E + +R EER + E ++ E +++RKE
Sbjct: 745 RQLQEEREAREREREE--REREKERERQE-WEQEKERECEERAREKEQDRKERELERKER 801
Query: 398 CIELEALGVYKTRLQDCLASLQANALNI 481
+E A + + L ++Q LNI
Sbjct: 802 ELEKIAFEQKSSFFEVALRAIQLK-LNI 828
>10_08_0374 -
17312430-17312513,17312794-17313029,17313081-17313261,
17313335-17313445,17313495-17313722,17313862-17313999,
17314159-17314375,17314452-17314564,17314919-17314921
Length = 436
Score = 30.3 bits (65), Expect = 0.92
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +2
Query: 218 RNAEDQQQLADRILGECKRVREETGERSEIMKATSDRRIEERIGDIEFNKSELQIQRKEI 397
R +++++ +R E R RE+ ER E + +R EER + E ++ E +++RKE
Sbjct: 334 RQLQEEREAREREREE--REREKERERQE-REQEKERECEERAREKEQDRKERELERKER 390
Query: 398 CIELEALGVYKTRLQDCLASLQ-ANALN 478
+E A + + L +L ++ALN
Sbjct: 391 ELEKIAFEQKSSFFEVALRALSVSSALN 418
>03_05_0371 +
23570246-23570359,23570499-23570575,23570600-23570675,
23570761-23570892,23570945-23571412,23571513-23571590,
23571693-23571809
Length = 353
Score = 30.3 bits (65), Expect = 0.92
Identities = 25/88 (28%), Positives = 45/88 (51%)
Frame = +2
Query: 218 RNAEDQQQLADRILGECKRVREETGERSEIMKATSDRRIEERIGDIEFNKSELQIQRKEI 397
R +++++ +R E R RE+ ER E + +R EER + E ++ E +++RKE
Sbjct: 214 RQLQEEREAREREREE--REREKERERQE-REQEKERECEERAREKEQDRKERELERKER 270
Query: 398 CIELEALGVYKTRLQDCLASLQANALNI 481
+E A + + L ++Q LNI
Sbjct: 271 ELEKIAFEQKSSFFEVALRAIQLK-LNI 297
>04_04_1144 + 31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 29.9 bits (64), Expect = 1.2
Identities = 19/81 (23%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Frame = +2
Query: 227 EDQQQLADRI--LGECKRVREETGERSEIMKATSDRRIEERIGDIEFNKSELQIQRKEIC 400
+ + +L++++ + E K EE +++ I ++ +++ G++E + +L+ E+
Sbjct: 881 QKEAELSEKLDQVNEEKEKFEELSKKATIKHLEAENQVQALQGELESARHKLE----EVE 936
Query: 401 IELEALGVYKTRLQDCLASLQ 463
+LEALG+ +T + D L S +
Sbjct: 937 SDLEALGIRETSVLDKLKSAE 957
>09_06_0320 - 22297579-22297760,22298433-22299358,22299422-22299747,
22300591-22300660,22301632-22301726,22301917-22302048,
22302154-22302222,22302953-22303051,22303169-22303253,
22303353-22303453,22303660-22303728,22303861-22303901,
22304085-22304303,22304444-22304470,22304562-22304660,
22304898-22305106,22305382-22305485,22305753-22305894,
22305991-22306289,22306508-22306903
Length = 1229
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +2
Query: 104 IGAPIATTRLSEQALVCIPPRAPKFTIHEWKVSNDLRCRNAEDQQQL-ADRILG 262
+G P T L +VC+ + ++ H W ++ D++ R +D Q A+R LG
Sbjct: 1100 VGHP--TLSLQSNDIVCLMAKVDQWDDHAWVLAVDMKNRRLKDVAQFGAERTLG 1151
>07_03_1287 +
25510813-25510862,25511326-25511504,25511715-25512037,
25512160-25513950
Length = 780
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/55 (25%), Positives = 33/55 (60%)
Frame = +2
Query: 218 RNAEDQQQLADRILGECKRVREETGERSEIMKATSDRRIEERIGDIEFNKSELQI 382
+ AED + +A + + ++ REET E+++ AT + R+ + +I+ +K+ ++
Sbjct: 546 QEAEDAKMVAFSVQEQVRKAREET-EKTKTAAATVNTRLSAVLKEIDASKASKKL 599
>06_03_0541 -
21944696-21944851,21944939-21945142,21945438-21947472,
21947644-21947720,21948289-21948477,21949188-21949448,
21949527-21949632,21951330-21951517,21951814-21951971,
21952015-21952840,21952947-21953210
Length = 1487
Score = 28.3 bits (60), Expect = 3.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 256 PGRV*KSPRGDWRKIGNHEGH 318
PG++ K+ G+W G H GH
Sbjct: 309 PGKISKAMPGEWLSAGEHSGH 329
>08_01_0976 - 9825000-9825288,9827206-9827600
Length = 227
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/58 (25%), Positives = 24/58 (41%)
Frame = -1
Query: 318 VAFMISDLSPVSSRTLLHSPRILSASCCWSSAFLQRKSLLTFHSCIVNFGALGGIHTK 145
V + L ++R L P + S C +S L + LT +C++ HTK
Sbjct: 97 VLLLAQALVTAATRCLCLGPALSSRGCAVASFVLSWITFLTAEACLIGGSVRNAYHTK 154
>07_03_0395 +
17644813-17644921,17644961-17645084,17645545-17646268,
17646971-17647219
Length = 401
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 206 DLRCRNAEDQQQLADRILGECKRVREETGERSEIMKATSDRR--IEERIGDIEFNKSELQ 379
+ R A + ADR+ + VRE+ + E++ +R +E R+ ++E + SE++
Sbjct: 159 EARAAVASSANERADRLARDLAEVREDLQKMRELVAGNERQRQGLEHRMSELENSLSEIR 218
>08_02_1267 +
25728324-25728407,25728436-25728502,25728753-25728828,
25729388-25729450,25729640-25729896,25731299-25731440,
25731524-25732017,25732398-25732536,25733805-25733876,
25733960-25734040,25734677-25734843,25734942-25735147,
25735301-25735427,25735515-25735639
Length = 699
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = -2
Query: 224 HFCSANRCSLSIRVS*ILVPLVGYILKPALIVWL*RLVLQLRYVCR 87
+ C ++C L + S LV ++ P ++V++ L+L + + CR
Sbjct: 498 NLCGTDKCDLILNQSKRKTKLVLEVVPPVVLVFVVLLILAIFWYCR 543
>06_03_0014 -
15403508-15403648,15404091-15404204,15404253-15404339,
15404448-15404577,15404693-15404934,15410335-15410400
Length = 259
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 389 KEICIELEALGVYKTRLQDCLASLQANALNICRKCL 496
KEI +EL+A + LQ+ L L+A AL R C+
Sbjct: 185 KEIQVELDAKKLESAVLQEELERLKAQALENYRHCI 220
>06_02_0254 - 13517352-13517557,13517612-13519073
Length = 555
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 385 LNLQFTFVELNISDSFFDSSIACGLHDF 302
L L + +ELN S S+ +S+ CGL F
Sbjct: 489 LELNLSQLELNFSTSWIESNYFCGLFTF 516
>06_01_0238 +
1815258-1815581,1816286-1816530,1816612-1816765,
1817043-1817257,1817351-1817468,1817685-1817895,
1818133-1818194,1818306-1818524
Length = 515
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -1
Query: 153 HTKACSDSLVVAIGAPITLRMPNCASPILYSYFN 52
H A + SL P+T+R P C +YF+
Sbjct: 474 HRMAMAFSLAACADVPVTIRDPGCTRKTFPNYFD 507
>04_03_0682 -
18639685-18639797,18639997-18640030,18640286-18640405,
18643174-18643204,18643250-18643302
Length = 116
Score = 27.1 bits (57), Expect = 8.6
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +3
Query: 318 QAIDESKNESEILSSTKVNCR---FKGKKFVSNWKL*ACTK 431
QA SK E E+ T + R FKG+K W++ +C +
Sbjct: 36 QATIRSKPEVELFMETTLQNRTNIFKGRKLQKKWRMDSCAE 76
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,898,750
Number of Sequences: 37544
Number of extensions: 257573
Number of successful extensions: 771
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1071221400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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