Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24f07
(504 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 26 0.26
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 25 0.45
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 25 0.45
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 25 0.45
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 25 0.45
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 24 0.78
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 24 0.78
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 24 0.78
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 24 0.78
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 24 1.0
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.8
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.8
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.8
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 1.8
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 2.4
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 22 4.2
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 21 5.5
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 21 5.5
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 21 5.5
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 5.5
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.3
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.3
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.3
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 21 7.3
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 7.3
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 7.3
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 7.3
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 21 9.6
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 21 9.6
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 21 9.6
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 21 9.6
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 21 9.6
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 25.8 bits (54), Expect = 0.26
Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = +3
Query: 21 NNNQFPQHNYN*NSYIKWAK--HNSAYV 98
NNN + +NYN N+Y + K +N Y+
Sbjct: 97 NNNNYNNYNYNNNNYNNYKKLYYNINYI 124
Score = 20.6 bits (41), Expect = 9.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +3
Query: 21 NNNQFPQHNYN*NSY 65
NNN + +NYN +Y
Sbjct: 92 NNNNYNNNNYNNYNY 106
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.0 bits (52), Expect = 0.45
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 21 NNNQFPQHNYN*NSYIKWAKHNSAYV 98
N N + +NYN N+Y K +N Y+
Sbjct: 93 NYNNYNNNNYNNNNYKKLQYYNINYI 118
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.0 bits (52), Expect = 0.45
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 21 NNNQFPQHNYN*NSYIKWAKHNSAYV 98
N N + +NYN N+Y K +N Y+
Sbjct: 93 NYNNYNNNNYNNNNYKKLQYYNINYI 118
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.0 bits (52), Expect = 0.45
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 21 NNNQFPQHNYN*NSYIKWAKHNSAYV 98
N N + +NYN N+Y K +N Y+
Sbjct: 93 NYNNYNNNNYNNNNYKKLQYYNINYI 118
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.0 bits (52), Expect = 0.45
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 21 NNNQFPQHNYN*NSYIKWAKHNSAYV 98
N N + +NYN N+Y K +N Y+
Sbjct: 93 NYNNYNNNNYNNNNYKKLQYYNINYI 118
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.2 bits (50), Expect = 0.78
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +3
Query: 15 SLNNNQFPQHNYN*NSYIKWAKHNSAYV 98
+++NN + ++NYN N+Y K +N Y+
Sbjct: 89 TIHNNNY-KYNYNNNNYNKKLYYNINYI 115
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.2 bits (50), Expect = 0.78
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +3
Query: 15 SLNNNQFPQHNYN*NSYIKWAKHNSAYV 98
+++NN + ++NYN N+Y K +N Y+
Sbjct: 89 TIHNNNY-KYNYNNNNYNKKLYYNINYI 115
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.2 bits (50), Expect = 0.78
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +3
Query: 15 SLNNNQFPQHNYN*NSYIKWAKHNSAYV 98
+++NN + ++NYN N+Y K +N Y+
Sbjct: 89 TIHNNNY-KYNYNNNNYNKKLYYNINYI 115
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.2 bits (50), Expect = 0.78
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +3
Query: 15 SLNNNQFPQHNYN*NSYIKWAKHNSAYV 98
+++NN + ++NYN N+Y K +N Y+
Sbjct: 89 TIHNNNY-KYNYNNNNYNKKLYYNINYI 115
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 23.8 bits (49), Expect = 1.0
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +2
Query: 176 FTIHEWKVSND-LRCRNAEDQQQLADRILGECK 271
F +HEW V ND L+ + D D EC+
Sbjct: 69 FQVHEWPVGNDTLKSKMEIDPATQKDAGYYECQ 101
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.0 bits (47), Expect = 1.8
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 102 TLRMPNCASPILYSYFNC 49
TL + A P+L SYFNC
Sbjct: 246 TLPQVSDAIPLLGSYFNC 263
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.0 bits (47), Expect = 1.8
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 102 TLRMPNCASPILYSYFNC 49
TL + A P+L SYFNC
Sbjct: 246 TLPQVSDAIPLLGSYFNC 263
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.0 bits (47), Expect = 1.8
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 102 TLRMPNCASPILYSYFNC 49
TL + A P+L SYFNC
Sbjct: 246 TLPQVSDAIPLLGSYFNC 263
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 1.8
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 102 TLRMPNCASPILYSYFNC 49
TL + A P+L SYFNC
Sbjct: 314 TLPQVSDAIPLLGSYFNC 331
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.6 bits (46), Expect = 2.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3
Query: 21 NNNQFPQHNYN*NSYIKWAKHN 86
NNN + +NYN N+Y + +N
Sbjct: 325 NNNNYNNNNYN-NNYNNYNNNN 345
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 4.2
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3
Query: 3 RCIESLNNNQFPQHNYN*NSY 65
+ I SL+NN +NYN Y
Sbjct: 313 KIISSLSNNTIHNNNYNKKLY 333
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 5.5
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = +3
Query: 12 ESLNNNQFPQHNYN*NSY 65
++++NN ++NYN N+Y
Sbjct: 88 KTIHNNNNYKYNYNNNNY 105
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 5.5
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = +3
Query: 12 ESLNNNQFPQHNYN*NSY 65
++++NN ++NYN N+Y
Sbjct: 88 KTIHNNNNYKYNYNNNNY 105
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 5.5
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = +3
Query: 12 ESLNNNQFPQHNYN*NSY 65
++++NN ++NYN N+Y
Sbjct: 88 KTIHNNNNYKYNYNNNNY 105
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.4 bits (43), Expect = 5.5
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = +3
Query: 12 ESLNNNQFPQHNYN*NSY 65
++++NN ++NYN N+Y
Sbjct: 321 KTIHNNNNYKYNYNNNNY 338
Score = 21.0 bits (42), Expect = 7.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 21 NNNQFPQHNYN*NSY 65
NNN + +NYN N+Y
Sbjct: 334 NNNNYNNNNYN-NNY 347
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.0 bits (42), Expect = 7.3
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1
Query: 81 ASPILYSYFNC 49
A P++ SYFNC
Sbjct: 253 AVPLIGSYFNC 263
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.0 bits (42), Expect = 7.3
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1
Query: 81 ASPILYSYFNC 49
A P++ SYFNC
Sbjct: 253 AVPLIGSYFNC 263
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.0 bits (42), Expect = 7.3
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1
Query: 81 ASPILYSYFNC 49
A P++ SYFNC
Sbjct: 253 AVPLIGSYFNC 263
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.0 bits (42), Expect = 7.3
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3
Query: 271 FTLAQDPVR*LLLVLCISAAQIVAHFPFVYRKFWC 167
F+LA + L+ L I +HFP+V+ + +C
Sbjct: 93 FSLAVSDLLLLISGLPPEIYYIWSHFPYVFGEAFC 127
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.0 bits (42), Expect = 7.3
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +3
Query: 21 NNNQFPQHNYN*NSY 65
NNN + ++NYN N+Y
Sbjct: 92 NNNNY-KYNYNNNNY 105
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 7.3
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1
Query: 81 ASPILYSYFNC 49
A P++ SYFNC
Sbjct: 321 AVPLIGSYFNC 331
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.0 bits (42), Expect = 7.3
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1
Query: 102 TLRMPNCASPILYSYFNC 49
T+ + A P+L +YFNC
Sbjct: 283 TMPATSDAVPLLGTYFNC 300
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 20.6 bits (41), Expect = 9.6
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -3
Query: 196 FPFVYRKFWCPWWDTY 149
FP V+ F +W TY
Sbjct: 423 FPIVFAFFNLAYWSTY 438
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 20.6 bits (41), Expect = 9.6
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -3
Query: 196 FPFVYRKFWCPWWDTY 149
FP V+ F +W TY
Sbjct: 423 FPIVFAFFNLAYWSTY 438
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 9.6
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -1
Query: 60 YFNCNYVVEIGYCLXIQC 7
Y+N NY+ +I + I C
Sbjct: 108 YYNINYIEQIPIPVPIYC 125
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 9.6
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -1
Query: 60 YFNCNYVVEIGYCLXIQC 7
Y+N NY+ +I + I C
Sbjct: 108 YYNINYIEQIPIPVPIYC 125
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 9.6
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -1
Query: 60 YFNCNYVVEIGYCLXIQC 7
Y+N NY+ +I + I C
Sbjct: 108 YYNINYIEQIPIPVPIYC 125
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,958
Number of Sequences: 438
Number of extensions: 3185
Number of successful extensions: 34
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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