Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24e19
         (606 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10990-3|ABB88237.1|  505|Caenorhabditis elegans Hypothetical pr...    29   1.9  
AF077540-5|AAC26308.1|  417|Caenorhabditis elegans C-type lectin...    29   2.6  
Z92973-7|CAB07494.1| 1213|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z81481-10|CAB03951.1| 1213|Caenorhabditis elegans Hypothetical p...    27   7.9  
Z73973-4|CAE54908.1|  367|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z73973-3|CAA98265.1|  468|Caenorhabditis elegans Hypothetical pr...    27   7.9  
AC084154-7|AAO91685.1|  304|Caenorhabditis elegans F-box a prote...    27   7.9  

>L10990-3|ABB88237.1|  505|Caenorhabditis elegans Hypothetical
           protein C30A5.10a protein.
          Length = 505

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = -1

Query: 132 KVPINEQKKSQKLNKNVNSCNVPNVKLK 49
           K PIN +++ +KL +N+   ++PN+ LK
Sbjct: 441 KTPINHEEEIKKLTENIPKLSLPNLWLK 468


>AF077540-5|AAC26308.1|  417|Caenorhabditis elegans C-type lectin
           protein 20 protein.
          Length = 417

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 3/84 (3%)
 Frame = +3

Query: 129 LW*NICCLTLLAVRSTKMSGNQEINNTVNGAQEMQPGFCSATCVNRSKLQEEIKKPDL-K 305
           +W  + C+     RS  +  +  I+       + +P      CV  +   E     D  K
Sbjct: 80  VWLGLYCIN--NYRSNCLWDDSNISTDQRNGFQSRPNVTQGNCVTVNTTSEHWSSTDCSK 137

Query: 306 TSDLFITCNLPKRFEH--PHWFNG 371
            S+LF+ C LP  FE    H +NG
Sbjct: 138 ESNLFV-CELPTTFEDNCQHNYNG 160


>Z92973-7|CAB07494.1| 1213|Caenorhabditis elegans Hypothetical
           protein C38D9.5 protein.
          Length = 1213

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = +3

Query: 165 VRSTKMSGNQEINNTVNGAQEMQPGFCSATCVNRSKLQEEIKKPDLKTSD 314
           V ST      E+NN + G  EMQ  +         KL +++ K D    D
Sbjct: 616 VVSTAADSPNEVNNLIAGLPEMQSSWIQENRDGMKKLLDDLTKLDKYAKD 665


>Z81481-10|CAB03951.1| 1213|Caenorhabditis elegans Hypothetical
           protein C38D9.5 protein.
          Length = 1213

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = +3

Query: 165 VRSTKMSGNQEINNTVNGAQEMQPGFCSATCVNRSKLQEEIKKPDLKTSD 314
           V ST      E+NN + G  EMQ  +         KL +++ K D    D
Sbjct: 616 VVSTAADSPNEVNNLIAGLPEMQSSWIQENRDGMKKLLDDLTKLDKYAKD 665


>Z73973-4|CAE54908.1|  367|Caenorhabditis elegans Hypothetical
           protein F25D1.1b protein.
          Length = 367

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -3

Query: 328 HVINRSDVLRSGFLISSCNFERFTQVAEQNPGCISCAPLTVL 203
           H+ NR+       LISS  F   T+  E+N G ++ + L +L
Sbjct: 50  HIANRASSQLLEHLISSEEFREMTKTLEENNGVLTDSTLKLL 91


>Z73973-3|CAA98265.1|  468|Caenorhabditis elegans Hypothetical
           protein F25D1.1a protein.
          Length = 468

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -3

Query: 328 HVINRSDVLRSGFLISSCNFERFTQVAEQNPGCISCAPLTVL 203
           H+ NR+       LISS  F   T+  E+N G ++ + L +L
Sbjct: 151 HIANRASSQLLEHLISSEEFREMTKTLEENNGVLTDSTLKLL 192


>AC084154-7|AAO91685.1|  304|Caenorhabditis elegans F-box a protein
           protein 74 protein.
          Length = 304

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
 Frame = +3

Query: 177 KMSGNQEINNTVNGAQEMQPGF---CSATCVNRSKLQEEIKKPDLKTSDLFITCNLPKRF 347
           K+   + +  ++NG   +  G    C  TC N+ KL +     ++  +DL+I    P  F
Sbjct: 55  KICSTKRLTISLNGLDILYKGLNEDCRITCRNQKKLLQNSNFEEVAFNDLYIFLKHPMNF 114


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,336,982
Number of Sequences: 27780
Number of extensions: 275280
Number of successful extensions: 785
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)