Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24e19
         (606 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       25   0.58 
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    23   2.3  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   5.4  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.4  
AJ876408-1|CAI45289.1|   52|Apis mellifera putative diuretic hor...    21   9.4  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.4  

>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 25.0 bits (52), Expect = 0.58
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -2

Query: 224 LCSVDCIIYFLISTHFS*TYR*QCETTNISPKF 126
           +CS+   I F + TH + T+  QC T N  P +
Sbjct: 166 VCSLPQTIVFHLETHPNVTWYSQCVTFNAFPTY 198


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 243 CSATCVNRSKLQEEIK 290
           CS +CVN+S L   +K
Sbjct: 22  CSYSCVNKSMLNSHLK 37


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 274 YKKKLKNPILKHQTCLSRVICRRDSSIHTGSM 369
           YK+ L    +   T LSR +  R ++I+ G++
Sbjct: 17  YKQDLSKLDVSKLTALSREVISRQATINIGTI 48



 Score = 21.0 bits (42), Expect = 9.4
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -1

Query: 120 NEQKKSQKLNKNVNSCNVPNVKLKGCR 40
           N+      + K    CN+ NVKLK  R
Sbjct: 189 NKSCTDSDIEKYKMFCNLENVKLKELR 215


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 465 QKTPNVYLVDTI 430
           +K PNVY V+T+
Sbjct: 454 KKNPNVYKVETV 465


>AJ876408-1|CAI45289.1|   52|Apis mellifera putative diuretic
           hormone-I protein.
          Length = 52

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 349 SNLFGRLHVINRSDVLRSGFLI 284
           S   G L ++N  DVLR   L+
Sbjct: 5   SKRIGSLSIVNSMDVLRQRVLL 26


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 465 QKTPNVYLVDTI 430
           +K PNVY V+T+
Sbjct: 454 KKNPNVYKVETV 465


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,161
Number of Sequences: 438
Number of extensions: 3621
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)