Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24e14
         (467 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC005051-1|AAH05051.1|  203|Homo sapiens chromosome 6 open readi...    38   0.013
BC003042-1|AAH03042.1|  203|Homo sapiens chromosome 6 open readi...    38   0.013
BC000764-1|AAH00764.1|  203|Homo sapiens chromosome 6 open readi...    38   0.013
AL133211-3|CAI21541.1|  203|Homo sapiens protein ( Human DNA seq...    38   0.013
AK222701-1|BAD96421.1|  203|Homo sapiens hypothetical protein FL...    38   0.013
AK001204-1|BAA91551.1|  135|Homo sapiens protein ( Homo sapiens ...    38   0.013

>BC005051-1|AAH05051.1|  203|Homo sapiens chromosome 6 open reading
           frame 166 protein.
          Length = 203

 Score = 38.3 bits (85), Expect = 0.013
 Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
 Frame = +2

Query: 278 MAC-ATLKRNLDWES-KAQLPTKRRRCSPFAA--SPSTSPGLKTSESKPSSFGESVSAPV 445
           MAC ATLKR LD++   +    KRRRC+P +A  S + SP L  + +  +SF  + ++P 
Sbjct: 1   MACGATLKRTLDFDPLLSPASPKRRRCAPLSAPTSAAASP-LSAAAATAASFSAAAASPQ 59

Query: 446 K 448
           K
Sbjct: 60  K 60


>BC003042-1|AAH03042.1|  203|Homo sapiens chromosome 6 open reading
           frame 166 protein.
          Length = 203

 Score = 38.3 bits (85), Expect = 0.013
 Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
 Frame = +2

Query: 278 MAC-ATLKRNLDWES-KAQLPTKRRRCSPFAA--SPSTSPGLKTSESKPSSFGESVSAPV 445
           MAC ATLKR LD++   +    KRRRC+P +A  S + SP L  + +  +SF  + ++P 
Sbjct: 1   MACGATLKRTLDFDPLLSPASPKRRRCAPLSAPTSAAASP-LSAAAATAASFSAAAASPQ 59

Query: 446 K 448
           K
Sbjct: 60  K 60


>BC000764-1|AAH00764.1|  203|Homo sapiens chromosome 6 open reading
           frame 166 protein.
          Length = 203

 Score = 38.3 bits (85), Expect = 0.013
 Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
 Frame = +2

Query: 278 MAC-ATLKRNLDWES-KAQLPTKRRRCSPFAA--SPSTSPGLKTSESKPSSFGESVSAPV 445
           MAC ATLKR LD++   +    KRRRC+P +A  S + SP L  + +  +SF  + ++P 
Sbjct: 1   MACGATLKRTLDFDPLLSPASPKRRRCAPLSAPTSAAASP-LSAAAATAASFSAAAASPQ 59

Query: 446 K 448
           K
Sbjct: 60  K 60


>AL133211-3|CAI21541.1|  203|Homo sapiens protein ( Human DNA
           sequence from clone RP3-486L4 on chromosome 6q14.3-16.1 
           Contains the 3' end of the ORC3L gene for origin
           recognition  ).
          Length = 203

 Score = 38.3 bits (85), Expect = 0.013
 Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
 Frame = +2

Query: 278 MAC-ATLKRNLDWES-KAQLPTKRRRCSPFAA--SPSTSPGLKTSESKPSSFGESVSAPV 445
           MAC ATLKR LD++   +    KRRRC+P +A  S + SP L  + +  +SF  + ++P 
Sbjct: 1   MACGATLKRTLDFDPLLSPASPKRRRCAPLSAPTSAAASP-LSAAAATAASFSAAAASPQ 59

Query: 446 K 448
           K
Sbjct: 60  K 60


>AK222701-1|BAD96421.1|  203|Homo sapiens hypothetical protein
           FLJ10342 variant protein.
          Length = 203

 Score = 38.3 bits (85), Expect = 0.013
 Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
 Frame = +2

Query: 278 MAC-ATLKRNLDWES-KAQLPTKRRRCSPFAA--SPSTSPGLKTSESKPSSFGESVSAPV 445
           MAC ATLKR LD++   +    KRRRC+P +A  S + SP L  + +  +SF  + ++P 
Sbjct: 1   MACGATLKRTLDFDPLLSPASPKRRRCAPLSAPTSAAASP-LSAAAATAASFSAAAASPQ 59

Query: 446 K 448
           K
Sbjct: 60  K 60


>AK001204-1|BAA91551.1|  135|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10342 fis, clone NT2RM2000837. ).
          Length = 135

 Score = 38.3 bits (85), Expect = 0.013
 Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
 Frame = +2

Query: 278 MAC-ATLKRNLDWES-KAQLPTKRRRCSPFAA--SPSTSPGLKTSESKPSSFGESVSAPV 445
           MAC ATLKR LD++   +    KRRRC+P +A  S + SP L  + +  +SF  + ++P 
Sbjct: 1   MACGATLKRTLDFDPLLSPASPKRRRCAPLSAPTSAAASP-LSAAAATAASFSAAAASPQ 59

Query: 446 K 448
           K
Sbjct: 60  K 60


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,582,418
Number of Sequences: 237096
Number of extensions: 1331193
Number of successful extensions: 3046
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3040
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4042952858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)