Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24e08
         (600 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    24   0.85 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   2.6  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   3.4  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   4.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   7.9  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   7.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   7.9  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 24.2 bits (50), Expect = 0.85
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 494 AICRPEIPLVALTCIMKSRGLVVELYCS 577
           A+ RPE+ L +L CI K   ++  L CS
Sbjct: 4   AMVRPELDLNSLKCITKVLTILGLLSCS 31


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 43   YFNILLLFIIMITEVTCKS 99
            Y+NI+ +   M+   TCKS
Sbjct: 948  YYNIIPILFFMLVCFTCKS 966


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 43   YFNILLLFIIMITEVTCKS 99
            Y+NI+ +   M+   TCKS
Sbjct: 948  YYNIIPILFFMLVCFTCKS 966


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 43   YFNILLLFIIMITEVTCKS 99
            Y+NI+ +   M+   TCKS
Sbjct: 948  YYNIIPILFFMLVCFTCKS 966


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 43   YFNILLLFIIMITEVTCKS 99
            Y+NI+ +   M+   TCKS
Sbjct: 948  YYNIIPILFFMLVCFTCKS 966


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 503 RPEIPLVALTCIMKSRGLVVELYCS 577
           RPE+ L +L CI K   ++  L CS
Sbjct: 3   RPELDLNSLKCITKVLTILGLLSCS 27


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 195 FIV*ISHNFTNVCFYNINLIVHRFR 121
           FI+ I    T+VC++ I L  H FR
Sbjct: 502 FII-IPVTLTSVCYFMIGLNSHGFR 525


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 348 RACLTCERPRVNNIRVHGCISEELRKY 428
           R C+   + RV+    HGC+S+ L +Y
Sbjct: 72  RPCVISRQLRVS----HGCVSKILNRY 94


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -1

Query: 279 EVIGSSCYQCGTHIWIIERHKNVIRHCRF 193
           +V G  C  C     ++E ++NV + C F
Sbjct: 723 KVPGECCAICVNATSLVESNRNVPQKCIF 751


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +1

Query: 1   DYRIKTKTKVMSRKYFNILLLFIIMITEVTCKSFTVVI 114
           D  +K   K   RK+  IL  FII I  +T  + +V +
Sbjct: 23  DSYLKIYHKEKYRKFCRILKYFIIAIYVLTILTSSVTL 60


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +1

Query: 19  KTKVMSRKYFNILLLFIIMI 78
           KT + + KY N ++LF + +
Sbjct: 313 KTVLKTNKYCNFIILFYLSV 332


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,478
Number of Sequences: 336
Number of extensions: 3808
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)