Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24e08
(600 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr... 29 0.39
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 29 0.69
SPAC589.06c |||pho88 family protein|Schizosaccharomyces pombe|ch... 27 2.8
SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|... 26 3.7
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 3.7
SPCC16A11.06c |gpi10||pig-B|Schizosaccharomyces pombe|chr 3|||Ma... 26 3.7
SPCC737.06c |||glutamate-cysteine ligase regulatory subunit |Sch... 26 4.8
SPAC17G8.11c |||mannosyltransferase complex subunit |Schizosacch... 25 6.4
SPAC1F5.07c |hem14||protoporphyrinogen oxidase|Schizosaccharomyc... 25 8.5
>SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1516
Score = 29.5 bits (63), Expect = 0.39
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +1
Query: 415 NYGNMPSVLDLCTNKYSQVHIILTGVCYMSARNSAGRL-DLY-YEVARA 555
+Y N PSVLD + +Y+Q+ I + A N RL +LY +E+ RA
Sbjct: 82 SYLNEPSVLDALSTRYNQLQIYTYSGIVLIAVNPFQRLPNLYTHEIVRA 130
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 28.7 bits (61), Expect = 0.69
Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Frame = +1
Query: 292 TTLTTSGGKDCPENSLAGIEHALRVSDPESTIYVFTDAYPKNYGNM-PSVLDLCTNKYSQ 468
TT+TT+ PE +++ + VS+ S+ T YP + +M S L + S
Sbjct: 572 TTMTTTTCSSRPEETISTVSTTSTVSESGSSSASITSTYPSSTLSMTTSHLSSSSVHSSS 631
Query: 469 VHIILTGVCYMSARNSAGRLDLYYEVARACGGVVLQF 579
H + MS SAG ++ C + L F
Sbjct: 632 AHSSSSRSSSMSLPPSAGSSTSLQRISLLCVFIPLLF 668
>SPAC589.06c |||pho88 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 202
Score = 26.6 bits (56), Expect = 2.8
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = -2
Query: 413 FG-YASVNTYIVDSGSLTRKACSIPAKEFSGQSLPPLVVNVVKEH 282
FG YA + I + T PA FSGQS LV VKE+
Sbjct: 44 FGVYAIIQARINANNDETPLVYEEPAPPFSGQSNGKLVTTTVKEY 88
>SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1402
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +1
Query: 487 GVCYMSARNSAGRLDLYYEVARACGGVVLQFESAHNLR 600
G+CY+ +N G +L A CG V+ S R
Sbjct: 325 GICYIETKNLDGETNLKMRHALTCGKNVVDEASCERCR 362
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 26.2 bits (55), Expect = 3.7
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -3
Query: 493 IHRSVLYGP---DYIY*CTNPKLRAYFRNSSDMHP*TRILLTLGR 368
+H +++G DY + +P LR Y RN + I++T+GR
Sbjct: 953 LHAFIVFGDTLADYFHMLLDPILRLYERNDVSIGIKESIMITIGR 997
>SPCC16A11.06c |gpi10||pig-B|Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 26.2 bits (55), Expect = 3.7
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 340 AGIEHALRVSDPESTIYVFTDAYPKNYGNMPSVLDLCTNKYSQV 471
A + L+V +S+ +VFT+A G ++LD T K++ V
Sbjct: 64 AALYRVLQVLKLDSSYFVFTNAPKLLQGTFAAILDYGTYKFALV 107
>SPCC737.06c |||glutamate-cysteine ligase regulatory subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 287
Score = 25.8 bits (54), Expect = 4.8
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +1
Query: 10 IKTKTKVMSRKYFNILLLFIIMITEVTCKSFTVVIDTTESMDDEINIIKANIGEV 174
IK + + +S+ ++N+ +LF I SF + ES + N I +I E+
Sbjct: 96 IKKREETLSQVFYNLHMLFGIDFVSTLVVSFPHITFLKESGNSSSNEIYDSIDEI 150
>SPAC17G8.11c |||mannosyltransferase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 25.4 bits (53), Expect = 6.4
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +3
Query: 27 SDVAQIFQYFTSVYYHDNRSNV*KFYSCYRYNGIY 131
+D + S Y+ R++V +++ Y+Y GIY
Sbjct: 104 TDYPWFLTQYDSYPYNIERADVVRYFILYKYGGIY 138
>SPAC1F5.07c |hem14||protoporphyrinogen oxidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 490
Score = 25.0 bits (52), Expect = 8.5
Identities = 10/47 (21%), Positives = 23/47 (48%)
Frame = +1
Query: 229 NDPDVGTALITRTADDFICSLTTLTTSGGKDCPENSLAGIEHALRVS 369
N+P+ G+ + T+L + ++ N+L ++H L++S
Sbjct: 369 NNPENGSKVTVMMGGSAYTKNTSLIPTNPEEAVNNALKALQHTLKIS 415
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,638,401
Number of Sequences: 5004
Number of extensions: 58434
Number of successful extensions: 167
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 167
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 262236260
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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