Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24e06
(612 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9UK41 Cluster: Vacuolar protein sorting-associated pro... 230 2e-59
UniRef50_Q9NA26 Cluster: Vacuolar protein sorting-associated pro... 144 1e-33
UniRef50_Q86E08 Cluster: Clone ZZZ359 mRNA sequence; n=1; Schist... 141 1e-32
UniRef50_Q9S9T7 Cluster: Vacuolar protein sorting-associated pro... 112 7e-24
UniRef50_Q5KNG8 Cluster: Vps28 protein, putative; n=1; Filobasid... 107 2e-22
UniRef50_Q8WZL1 Cluster: Vps28 protein; n=1; Yarrowia lipolytica... 99 4e-20
UniRef50_A2WVR1 Cluster: Putative uncharacterized protein; n=3; ... 85 2e-15
UniRef50_Q02767 Cluster: Vacuolar protein sorting-associated pro... 85 2e-15
UniRef50_Q4P529 Cluster: Putative uncharacterized protein; n=1; ... 83 4e-15
UniRef50_O13872 Cluster: Vacuolar protein sorting-associated pro... 68 4e-15
UniRef50_A4RRM3 Cluster: Predicted protein; n=2; Ostreococcus|Re... 79 8e-14
UniRef50_Q4Q0P5 Cluster: Vacuolar protein sorting-associated pro... 71 2e-11
UniRef50_Q383K5 Cluster: Vacuolar sorting-associated protein-lik... 68 2e-10
UniRef50_A7AS71 Cluster: Vacuolar sorting protein 28, putative; ... 66 6e-10
UniRef50_Q6BWP7 Cluster: Debaryomyces hansenii chromosome B of s... 51 2e-05
UniRef50_Q6YQC0 Cluster: Arginyl-tRNA synthetase; n=3; Bacteria|... 37 0.43
UniRef50_Q7KVM3 Cluster: CG9294-PB, isoform B; n=3; Sophophora|R... 36 1.0
UniRef50_Q75C00 Cluster: ACR119Wp; n=1; Eremothecium gossypii|Re... 34 2.3
UniRef50_UPI00006CFCCC Cluster: cyclic nucleotide-binding domain... 34 3.1
UniRef50_Q88X18 Cluster: Integral membrane protein; n=1; Lactoba... 33 5.3
UniRef50_Q4T9V2 Cluster: Chromosome undetermined SCAF7488, whole... 33 7.1
UniRef50_Q0J3Z7 Cluster: Os08g0544300 protein; n=1; Oryza sativa... 33 7.1
UniRef50_Q4UIT7 Cluster: Putative uncharacterized protein; n=2; ... 33 7.1
UniRef50_A0BQV7 Cluster: Chromosome undetermined scaffold_121, w... 33 7.1
UniRef50_Q83NU0 Cluster: Putative integral membrane protein; n=2... 32 9.3
>UniRef50_Q9UK41 Cluster: Vacuolar protein sorting-associated
protein 28 homolog; n=36; Eumetazoa|Rep: Vacuolar
protein sorting-associated protein 28 homolog - Homo
sapiens (Human)
Length = 221
Score = 230 bits (562), Expect = 2e-59
Identities = 106/151 (70%), Positives = 129/151 (85%)
Frame = +3
Query: 159 RPELYEEIKLYKNAREREKHDNMAELYAVVCTLQHLEKAYMRDCVRAQEYTAACSRLLVQ 338
+PELYEE+KLYKNAREREK+DNMAEL+AVV T+Q LEKAY++DCV EYTAACSRLLVQ
Sbjct: 17 KPELYEEVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDCVSPSEYTAACSRLLVQ 76
Query: 339 YKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNLIKDDKGNTNKYIAEIVSLF 518
YK AF+QVQ E +I+ F K+RLDCP A+ERI+E++P IKDDKGN N+ IA++VSLF
Sbjct: 77 YKAAFRQVQGSEISSIDEFCRKFRLDCPLAMERIKEDRPITIKDDKGNLNRCIADVVSLF 136
Query: 519 ITLMDKLRLEFRAMDMIQPELRDLRDTMDRL 611
IT+MDKLRLE RAMD IQP+LR+L +TM R+
Sbjct: 137 ITVMDKLRLEIRAMDEIQPDLRELMETMHRM 167
>UniRef50_Q9NA26 Cluster: Vacuolar protein sorting-associated
protein 28 homolog; n=2; Caenorhabditis|Rep: Vacuolar
protein sorting-associated protein 28 homolog -
Caenorhabditis elegans
Length = 210
Score = 144 bits (350), Expect = 1e-33
Identities = 72/153 (47%), Positives = 100/153 (65%)
Frame = +3
Query: 147 MQDTRPELYEEIKLYKNAREREKHDNMAELYAVVCTLQHLEKAYMRDCVRAQEYTAACSR 326
M L E++L++N ERE+ +N++EL+AV+ L+HLEK + RD V A EY + C +
Sbjct: 1 MSSQNANLMREVRLFENHSEREQMENLSELFAVLNALEHLEKMFSRDHVSADEYKSECFK 60
Query: 327 LLVQYKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNLIKDDKGNTNKYIAEI 506
L+ QYKV + V +IE F KYRL CPAA+ERIRE +P +KDD+GN K+IA I
Sbjct: 61 LIDQYKVTMRLVHGAT--SIEDFAKKYRLHCPAAIERIREGRPITVKDDQGNVLKHIASI 118
Query: 507 VSLFITLMDKLRLEFRAMDMIQPELRDLRDTMD 605
V FIT +D LRL RA+D + P L DL + ++
Sbjct: 119 VEQFITFLDALRLNTRAVDDLYPGLDDLYNAIN 151
>UniRef50_Q86E08 Cluster: Clone ZZZ359 mRNA sequence; n=1;
Schistosoma japonicum|Rep: Clone ZZZ359 mRNA sequence -
Schistosoma japonicum (Blood fluke)
Length = 214
Score = 141 bits (342), Expect = 1e-32
Identities = 67/104 (64%), Positives = 83/104 (79%)
Frame = +3
Query: 300 QEYTAACSRLLVQYKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNLIKDDKG 479
Q AACS+LLVQY+ AFKQVQ DEF +E F+ KY++DCPAALERI+E +P IKD+K
Sbjct: 36 QSIHAACSKLLVQYEAAFKQVQGDEFSTVEDFMRKYKMDCPAALERIKEGRPITIKDNKQ 95
Query: 480 NTNKYIAEIVSLFITLMDKLRLEFRAMDMIQPELRDLRDTMDRL 611
N NK IA+ VSLFIT+MDKLRLE RA+D I P+LR+L +T+ RL
Sbjct: 96 NINKCIADTVSLFITVMDKLRLEIRAVDEIHPDLRELYETLCRL 139
Score = 33.1 bits (72), Expect = 5.3
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 196 MRVNEKSMITWLSSMLSSVPFSTWRRHTCVIVCEHRNTRRHAVVS 330
M EKSMI L+SML S P++ +++H I+ ++ HA S
Sbjct: 1 MHAKEKSMIILLNSMLLSTPYNAYKKHILKIMWNQQSI--HAACS 43
>UniRef50_Q9S9T7 Cluster: Vacuolar protein sorting-associated
protein 28 homolog 1; n=4; Eukaryota|Rep: Vacuolar
protein sorting-associated protein 28 homolog 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 210
Score = 112 bits (269), Expect = 7e-24
Identities = 58/152 (38%), Positives = 89/152 (58%), Gaps = 7/152 (4%)
Frame = +3
Query: 177 EIKLYKNAREREKHDNMAELYAVVCTLQHLEKAYMRDCVRAQEYTAACSRLLVQYKVAFK 356
E+KL+ + RERE ++N AEL+A++ + LEKAY+RD + EY + C +L+V +K
Sbjct: 3 EVKLWNDKREREMYENFAELFAIIKATEKLEKAYIRDLINPSEYESECQKLIVHFKTLSA 62
Query: 357 QVQADEFPNIEAFVAKYRLDCPAALER-IRENKPNLIKD------DKGNTNKYIAEIVSL 515
++ D PNIE F Y++DCPAAL R + P ++ N+ +AE V
Sbjct: 63 TLK-DTVPNIERFADTYKMDCPAALYRLVTSGLPATVEHRATVAASTSNSASIVAECVQN 121
Query: 516 FITLMDKLRLEFRAMDMIQPELRDLRDTMDRL 611
FIT MD L+L A+D + P L DL ++++L
Sbjct: 122 FITSMDSLKLNMVAVDQVYPLLSDLSASLNKL 153
>UniRef50_Q5KNG8 Cluster: Vps28 protein, putative; n=1;
Filobasidiella neoformans|Rep: Vps28 protein, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 184
Score = 107 bits (258), Expect = 2e-22
Identities = 58/156 (37%), Positives = 91/156 (58%), Gaps = 9/156 (5%)
Frame = +3
Query: 168 LYEEIKLYKNAREREKHDNMAELYAVVCTLQHLEKAYMRDCVRAQEYTAACSRLLVQYKV 347
L EE++L+ EREK +N+A LY+++ +L++LE+AY+RD V +EY AC +LL QYK
Sbjct: 4 LDEEVRLWTTNAEREKTENLATLYSIIVSLEYLERAYVRDSVSGKEYAPACLKLLAQYKS 63
Query: 348 AFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNLI------KDDKGNTNKYIAEIV 509
K V AD+ +EAF+ ++++D PAAL R+ P + +D K+ + ++
Sbjct: 64 LMKLV-ADDIGGVEAFMKRFKMDHPAALHRLTVGVPATVEHSAEAEDGGAEKGKWCSLLI 122
Query: 510 ---SLFITLMDKLRLEFRAMDMIQPELRDLRDTMDR 608
FIT MD L+L +A D + P L +L R
Sbjct: 123 ITEQSFITFMDALKLNLKAKDQLHPFLTELMSGYSR 158
>UniRef50_Q8WZL1 Cluster: Vps28 protein; n=1; Yarrowia
lipolytica|Rep: Vps28 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 246
Score = 99 bits (238), Expect = 4e-20
Identities = 60/175 (34%), Positives = 98/175 (56%), Gaps = 27/175 (15%)
Frame = +3
Query: 168 LYEEIKLYKNAREREKHDNMAELYAVVCTLQHLEKAYMRDCVRAQEYTAACSRLLVQYKV 347
L EE++LY + +ERE+++N+AELY+++ +L +LEKA+++D V Q+Y++ C+RLL QY
Sbjct: 21 LNEEVRLYSSPKERERYENLAELYSIIVSLDYLEKAFLKDSVSQQDYSSICTRLLSQYNT 80
Query: 348 AFK-QVQADEFPNIEAFVAKYRLDCPAALERIRENKP----------------NLIKDDK 476
K + +EF +++ F KY LDC A +RI P N+ D
Sbjct: 81 LLKDEGVQNEFVSLQHFKDKYGLDCSLATQRISVGIPASVVIASQASSALASTNIGGMDG 140
Query: 477 G----------NTNKYIAEIVSLFITLMDKLRLEFRAMDMIQPELRDLRDTMDRL 611
G +T++ +AE FIT MD L+L + A D + P L DL ++ ++
Sbjct: 141 GGRSTPTGEGPSTSRAVAEATGNFITCMDALKLNYSATDQLHPLLGDLMTSLGKV 195
>UniRef50_A2WVR1 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 253
Score = 84.6 bits (200), Expect = 2e-15
Identities = 52/148 (35%), Positives = 78/148 (52%), Gaps = 11/148 (7%)
Frame = +3
Query: 201 REREKHDNMAELYAVVCTLQHLEKAYMRDCVRAQEYTAACSRLLVQYKVAFKQVQADEFP 380
RERE +++A+LYA++ + LE+AY+RD V A +Y A C +L+ Q+ +
Sbjct: 50 RERELLESLADLYAIIKATEKLERAYVRDLVSAADYEAECLKLISQFNSLSSSLAG--VV 107
Query: 381 NIEAFVAKYRLDCPAALER-IRENKPNLIK----------DDKGNTNKYIAEIVSLFITL 527
I FV YRLDCPAAL R ++ P ++ + IA+ V FIT
Sbjct: 108 TIPRFVEAYRLDCPAALNRLVQSGVPATVELRAAASSSAPASSAASAAAIAQCVQSFITA 167
Query: 528 MDKLRLEFRAMDMIQPELRDLRDTMDRL 611
MD ++L A D ++P L DL +M +L
Sbjct: 168 MDAVKLNMLANDQVRPLLHDLSTSMGKL 195
>UniRef50_Q02767 Cluster: Vacuolar protein sorting-associated
protein 28; n=10; Saccharomycetales|Rep: Vacuolar
protein sorting-associated protein 28 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 242
Score = 84.6 bits (200), Expect = 2e-15
Identities = 55/181 (30%), Positives = 93/181 (51%), Gaps = 27/181 (14%)
Frame = +3
Query: 150 QDTRPELYEEIKLYKNA---REREKHDNMAELYAVVCTLQHLEKAYMRDCVRAQEYTAAC 320
QD ++E+ L+ N+ +++E + ++E+Y++V TL H+EKAY++D + +YT
Sbjct: 12 QDISQLFHDEVPLFDNSITSKDKEVIETLSEIYSIVITLDHVEKAYLKDSIDDTQYTNTV 71
Query: 321 SRLLVQYKVAFKQVQADE----FPNIEAFVAKYRLDCPAALERIR--------------- 443
+LL Q+KV +E F +IEAF Y + A+ R+
Sbjct: 72 DKLLKQFKVYLNSQNKEEINKHFQSIEAFCDTYNITASNAITRLERGIPITAEHAISTTT 131
Query: 444 -----ENKPNLIKDDKGNTNKYIAEIVSLFITLMDKLRLEFRAMDMIQPELRDLRDTMDR 608
+NK + D K N KY+AE FIT+MD L+L + A D + P L +L +++R
Sbjct: 132 SAPSGDNKQSSSSDKKFNA-KYVAEATGNFITVMDALKLNYNAKDQLHPLLAELLISINR 190
Query: 609 L 611
+
Sbjct: 191 V 191
>UniRef50_Q4P529 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 170
Score = 83.4 bits (197), Expect = 4e-15
Identities = 45/143 (31%), Positives = 78/143 (54%), Gaps = 13/143 (9%)
Frame = +3
Query: 171 YEEIKLYKNAREREKHDNMAELYAVVCTLQHLEKAYMRDCVRAQEYTAACSRLLVQYKVA 350
YEE +LY N +RE+++NMA L++++ L +LE+AY+R+ + +EY C+RLL Q K
Sbjct: 12 YEEARLYSNNHDRERYENMATLFSLIVALDYLERAYVRESISEKEYAPTCTRLLAQCKTM 71
Query: 351 FKQVQADE------FPNIEAFVAKYRLDCPAALERIRENKPNLIK-------DDKGNTNK 491
K + E ++ F+ Y+++ AA+ R+ P ++ + K
Sbjct: 72 LKLIVDQEKHSSKPITDLADFMRIYKMNYLAAVHRLTVGVPATVEHASSSSLQSSSDRAK 131
Query: 492 YIAEIVSLFITLMDKLRLEFRAM 560
++AE FIT MD L+L+ A+
Sbjct: 132 WVAETTQNFITFMDALKLKLLAV 154
>UniRef50_O13872 Cluster: Vacuolar protein sorting-associated
protein 28 homolog; n=1; Schizosaccharomyces pombe|Rep:
Vacuolar protein sorting-associated protein 28 homolog -
Schizosaccharomyces pombe (Fission yeast)
Length = 248
Score = 67.7 bits (158), Expect(2) = 4e-15
Identities = 30/107 (28%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Frame = +3
Query: 195 NAREREKHDNMAELYAVVCTLQHLEKAYMRDCVRAQEYTAACSRLLVQYKVAFKQVQADE 374
+ + ++ ++++ LY+++ L+ LEKA+ +D V ++ + C L+ Q++ F + +
Sbjct: 21 HTKNQQVREDLSILYSILVALEQLEKAFTKDAVSTSDFNSTCELLIQQWESCFSDERVTQ 80
Query: 375 -FPNIEAFVAKYRLDCPAALERIRENKPNLIKDDKGNTNKYIAEIVS 512
F + E F +KYRL CP A++RI+E I D++ +N + +S
Sbjct: 81 AFGSFEDFCSKYRLQCPRAIKRIQEG----ISDERSQSNSTFSNAIS 123
Score = 35.9 bits (79), Expect(2) = 4e-15
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +3
Query: 489 KYIAEIVSLFITLMDKLRLEFRAMDMIQPELRDLRDTMDRL 611
K IA +V FIT +D +RL F A D + P L +L +MD L
Sbjct: 155 KSIAGLVQNFITTLDAIRLNFIAKDQLHPLLSELIVSMDDL 195
>UniRef50_A4RRM3 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 218
Score = 79.0 bits (186), Expect = 8e-14
Identities = 46/148 (31%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Frame = +3
Query: 174 EEIKLYKNAREREKHDNMAELYAVVCTLQHLEKAYMRDCVRAQEYTAACSRLLVQYKVAF 353
E ++L++ ER+++D+ A LYA+ L+ LE+AY+R V A+ Y AC L ++K
Sbjct: 11 ECVRLWRTTDERKRYDDFATLYALARALEKLERAYVRSSVDAKAYERACVDLTSKFK-TL 69
Query: 354 KQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNLIK--------DDKGNTN-KYIAEI 506
+ V D P+++ F+ Y PAA R+ P + + +G + +A+
Sbjct: 70 RSVLRDSVPDLDRFLETYGARVPAARRRLEAGVPATAEHGGAARGTEAEGRAEARAVADA 129
Query: 507 VSLFITLMDKLRLEFRAMDMIQPELRDL 590
FI +MD ++L+ RA D + P L DL
Sbjct: 130 THCFIGVMDTVKLDMRAKDQVAPALGDL 157
>UniRef50_Q4Q0P5 Cluster: Vacuolar protein sorting-associated
protein-like protein; n=3; Leishmania|Rep: Vacuolar
protein sorting-associated protein-like protein -
Leishmania major
Length = 209
Score = 71.3 bits (167), Expect = 2e-11
Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 4/140 (2%)
Frame = +3
Query: 204 EREKHDNMAELYAVVCTLQHLEKAYMRDCVRAQEYTAACSRLLVQYKVAFKQVQADE--- 374
+R+ D +A+L+AV+ ++ +EKA RD + +Y + RLL +YK +Q
Sbjct: 10 DRQHIDYLADLFAVIIAIEQIEKANRRDLINPNQYDSTVRRLLEKYKNTVAHLQGARNPY 69
Query: 375 FPNIEAFVAKYRLDCPAALERIRENKPNLIKDDKGN-TNKYIAEIVSLFITLMDKLRLEF 551
F I+ F KY C AA IR+ + ++ + E FITL+D LRL+
Sbjct: 70 FTTIDDFFDKYCARCLAARATIRDGPMSRPTENNARFLARQSVECSDHFITLLDSLRLQQ 129
Query: 552 RAMDMIQPELRDLRDTMDRL 611
++D++ P L DL + +L
Sbjct: 130 TSVDVLNPPLGDLLQVLRKL 149
>UniRef50_Q383K5 Cluster: Vacuolar sorting-associated protein-like,
putative; n=2; Trypanosoma|Rep: Vacuolar
sorting-associated protein-like, putative - Trypanosoma
brucei
Length = 218
Score = 68.1 bits (159), Expect = 2e-10
Identities = 44/148 (29%), Positives = 77/148 (52%), Gaps = 12/148 (8%)
Frame = +3
Query: 204 EREKHDNMAELYAVVCTLQHLEKAYMRDCVRAQEYTAACSRLLVQYKVAFKQVQADEFP- 380
ER+ + +A+L+A++ ++ +EKA +RD + ++Y++ +RLL +YK ++ P
Sbjct: 11 ERQHVEYLADLFAIILAIEKVEKATLRDIITQEQYSSTITRLLDKYKSTVTYLEQSRNPF 70
Query: 381 --NIEAFVAKYRLDCPAALERI--------RENKPNLIKDDKGNTN-KYIAEIVSLFITL 527
I++F Y CPAA RI ++ + D G + + + E FITL
Sbjct: 71 YSTIDSFWENYGSRCPAARTRIQLSFDDAKQQQQQQQDSDVNGTVDPRLVLECGQHFITL 130
Query: 528 MDKLRLEFRAMDMIQPELRDLRDTMDRL 611
MD L+L+ A+D + L DL + RL
Sbjct: 131 MDSLKLQQTAVDQLYTLLADLVRGLQRL 158
>UniRef50_A7AS71 Cluster: Vacuolar sorting protein 28, putative;
n=1; Babesia bovis|Rep: Vacuolar sorting protein 28,
putative - Babesia bovis
Length = 222
Score = 66.1 bits (154), Expect = 6e-10
Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Frame = +3
Query: 219 DNMAELYAVVCTLQHLEKAYMRDCVRAQEYTAACSRLLVQYKVAFKQVQADEFPNI-EAF 395
D +A +Y+++ L+HLE +++ V +EY C+ LL + Q+ + PN+ EA
Sbjct: 17 DRLANVYSLLQALEHLEDSFISGYVTEKEYAEECNELL-----SLCQILEEATPNVFEAL 71
Query: 396 VAKYRLDCPAALERIRENKP----NLIKDDKGNTNKYIAEIVSLFITLMDKLRLEFRAMD 563
+Y + CP AL R+R+ P N I+ +K N + E+ FITL+D L+L +++
Sbjct: 72 AKEYNVKCPLALNRLRKGTPGIQNNNIQKNKSNDAYLMFELSEQFITLVDALKLGCNSVE 131
Query: 564 MI 569
+
Sbjct: 132 EV 133
>UniRef50_Q6BWP7 Cluster: Debaryomyces hansenii chromosome B of
strain CBS767 of Debaryomyces hansenii; n=3;
Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
B of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 280
Score = 50.8 bits (116), Expect = 2e-05
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 40/173 (23%)
Frame = +3
Query: 192 KNAREREKHDNMAELYAVVCTLQHLEKAYMRDCVRAQE-YTAACSRLLVQYKVAFKQVQ- 365
K+ + +D++AE+Y++V ++ +EK++++D + ++ YT+ RL+ QY++ K Q
Sbjct: 39 KSPLHKNIYDSLAEIYSIVTVMEMIEKSFLKDYITDKDKYTSTTLRLINQYQIIIKGFQE 98
Query: 366 --------ADEFPNI--------EAFVAKYRLDCPAALERIRENKPNLIKD--------- 470
AD P E Y L P A++R++ P I+
Sbjct: 99 DQSKQTILADIVPGASVDSDDFSEKLANTYNLHAPLAIKRLQTGVPVTIEHLGTQVESSS 158
Query: 471 ----DKGNTN---------KYIAEIVSLFITLMDKLRLEFRAMDMIQPELRDL 590
+ N N + +AE+ FIT MD L+L ++ D + P L DL
Sbjct: 159 HPTHNISNVNTSTNTKASGRLVAEVTGNFITCMDALKLNYKTKDQLHPLLSDL 211
>UniRef50_Q6YQC0 Cluster: Arginyl-tRNA synthetase; n=3;
Bacteria|Rep: Arginyl-tRNA synthetase - Onion yellows
phytoplasma
Length = 557
Score = 36.7 bits (81), Expect = 0.43
Identities = 22/74 (29%), Positives = 40/74 (54%)
Frame = +3
Query: 324 RLLVQYKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNLIKDDKGNTNKYIAE 503
+LL Q+ + ++ Q D P+I +A+Y L + + + ++ DDK TN +
Sbjct: 479 KLLDQFPLILQKAQKDNMPSI---LARYMLKITQNVNFLYSQE-KILTDDKTTTNTNLLL 534
Query: 504 IVSLFITLMDKLRL 545
I ++FITL + LR+
Sbjct: 535 IQAVFITLKESLRI 548
>UniRef50_Q7KVM3 Cluster: CG9294-PB, isoform B; n=3; Sophophora|Rep:
CG9294-PB, isoform B - Drosophila melanogaster (Fruit
fly)
Length = 352
Score = 35.5 bits (78), Expect = 1.0
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +1
Query: 193 KMRVNEKSMITWLSSMLSSVPFSTWRRHTCVIVCEHRNTRRHAVVSSCSTKWLSNKYRLM 372
++R NE + WL S+L +P +T T V+ TRR SS +++ +++ +
Sbjct: 22 RIRPNEGKIFEWLGSIL--LPSTTTTTSTPVVATTSTTTRRTTTTSSTTSRTTTSRTTVA 79
Query: 373 SFPI 384
+FPI
Sbjct: 80 NFPI 83
>UniRef50_Q75C00 Cluster: ACR119Wp; n=1; Eremothecium gossypii|Rep:
ACR119Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 931
Score = 34.3 bits (75), Expect = 2.3
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = -1
Query: 339 TARGDDCMPPCIPVLAHNHACMPSPGAEGYRRQHRA 232
T + DD +P + ++A+++ C SPG+ G R++ A
Sbjct: 624 TIKSDDMLPSTLEIVAYDNECGTSPGSNGQHRRYSA 659
>UniRef50_UPI00006CFCCC Cluster: cyclic nucleotide-binding domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: cyclic nucleotide-binding domain containing
protein - Tetrahymena thermophila SB210
Length = 1288
Score = 33.9 bits (74), Expect = 3.1
Identities = 19/74 (25%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Frame = +3
Query: 402 KYRLDCPAALERIRENKPNLIKDDKG----NTNKYIAEIVSLFITLMDKLRLEFRAMDMI 569
+++L PA+ + E++ N++ +D+G N + I ++ S +T DKL L ++
Sbjct: 763 EHQLQEPASKQSKGESQTNILLNDQGSSDENAKEKIMQLQSKSMTKTDKLILNLSKNSLV 822
Query: 570 QPELRDLRDTMDRL 611
Q +L+ +R+ + L
Sbjct: 823 QKQLKQIREQNEAL 836
>UniRef50_Q88X18 Cluster: Integral membrane protein; n=1;
Lactobacillus plantarum|Rep: Integral membrane protein -
Lactobacillus plantarum
Length = 860
Score = 33.1 bits (72), Expect = 5.3
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -2
Query: 263 VLKGTDDSIELSHVIMLFSFTRIFVQFNLFIQFRTCILHLYYFFTDL 123
V++G D I SH F + + + N ++ + TC+ +YYF L
Sbjct: 180 VIQGLDHLIATSHPGRFFGWLWVSIVTNYYLGYMTCLFVIYYFIYQL 226
>UniRef50_Q4T9V2 Cluster: Chromosome undetermined SCAF7488, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF7488, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 2511
Score = 32.7 bits (71), Expect = 7.1
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 190 TKMRVNEKSMITWLSSMLSSVPFSTWRRHTCVIVCEHRNTRRHAVVSS 333
T +V + + WL + + P S HTC +VC +T RH+ V S
Sbjct: 1579 TSNKVQVQRLEAWLWTKVCGSPLSCGN-HTCEVVCHDGHTHRHSQVRS 1625
>UniRef50_Q0J3Z7 Cluster: Os08g0544300 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os08g0544300 protein -
Oryza sativa subsp. japonica (Rice)
Length = 96
Score = 32.7 bits (71), Expect = 7.1
Identities = 21/69 (30%), Positives = 32/69 (46%)
Frame = -1
Query: 330 GDDCMPPCIPVLAHNHACMPSPGAEGYRRQHRAQPCYHAFLVHAHFCTI*SLHTIPDVYL 151
G DC +P +H+ + S A + H +P +H L+ HF + LH + +
Sbjct: 23 GLDCHAAQLPTPSHHLSQAKSAPATHHMPHHARRPVHHHLLLLLHFHLLLLLHFLHRL-- 80
Query: 150 ASLLFLHRF 124
L FLHRF
Sbjct: 81 --LQFLHRF 87
>UniRef50_Q4UIT7 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 428
Score = 32.7 bits (71), Expect = 7.1
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = +3
Query: 381 NIEAFVAKYRLDCPAALERIRENKPNLIKDDKGNTNKYIAEIVSLFITLMDKLRLEFRAM 560
N++ F K D P+ L+ I N + + + N Y E SL TL+DK L +
Sbjct: 124 NLKLFATKLIFDLPSHLDSINYNNISKLCESLCFLNLYSEEFASLISTLVDKKTLARGEI 183
Query: 561 DMI 569
+M+
Sbjct: 184 EML 186
>UniRef50_A0BQV7 Cluster: Chromosome undetermined scaffold_121,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_121,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 216
Score = 32.7 bits (71), Expect = 7.1
Identities = 15/55 (27%), Positives = 31/55 (56%)
Frame = +3
Query: 357 QVQADEFPNIEAFVAKYRLDCPAALERIRENKPNLIKDDKGNTNKYIAEIVSLFI 521
Q Q+ E PN++ + K +DC LE+ +++ L+K+ + +Y+ E+ +I
Sbjct: 110 QQQSTEVPNLQEKMLKLLIDCRQYLEKRTDHEAILLKEQQDQFFQYLQELNQPYI 164
>UniRef50_Q83NU0 Cluster: Putative integral membrane protein; n=2;
Tropheryma whipplei|Rep: Putative integral membrane
protein - Tropheryma whipplei (strain TW08/27)
(Whipple's bacillus)
Length = 701
Score = 32.3 bits (70), Expect = 9.3
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = -2
Query: 365 LYLFESHFVLHEETTACRRVFLCSHTITHVCLLQVLKGTDDSIELSHVIMLFSFTRIFVQ 186
+YLF +H V+H A +FL + + L V D S I+ F TR F+Q
Sbjct: 469 MYLFSAHMVMHMTLGAIVPIFLVVASPVTLLLRAVPARRDGSFGPREWILFFLNTR-FIQ 527
Query: 185 FNLF--IQFRTCILHLY-YFFTDL*Q 117
F I IL ++ ++FTDL Q
Sbjct: 528 FISLPPIAAAIFILSMFIFYFTDLLQ 553
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 561,318,172
Number of Sequences: 1657284
Number of extensions: 11144865
Number of successful extensions: 31905
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 30660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31861
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43977329078
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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