Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24e06
(612 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC050713-1|AAH50713.1| 233|Homo sapiens vacuolar protein sortin... 230 3e-60
BC019321-1|AAH19321.1| 221|Homo sapiens vacuolar protein sortin... 230 3e-60
BC006485-1|AAH06485.1| 221|Homo sapiens vacuolar protein sortin... 230 3e-60
AF316887-1|AAK00314.1| 221|Homo sapiens vacuolar sorting protei... 230 3e-60
AF182844-1|AAF00499.1| 221|Homo sapiens VPS28 protein protein. 230 3e-60
BC069099-1|AAH69099.1| 98|Homo sapiens keratin associated prot... 33 1.0
BC118918-1|AAI18919.1| 1302|Homo sapiens cingulin-like 1 protein. 31 3.2
BC112049-1|AAI12050.1| 1302|Homo sapiens cingulin-like 1 protein. 31 3.2
BC093827-1|AAH93827.1| 1302|Homo sapiens cingulin-like 1 protein. 31 3.2
AY274808-1|AAP42073.1| 1302|Homo sapiens KIAA1749 protein protein. 31 3.2
AK056673-1|BAB71249.1| 883|Homo sapiens protein ( Homo sapiens ... 31 3.2
AB051536-1|BAB21840.2| 1047|Homo sapiens KIAA1749 protein protein. 31 3.2
BC146814-1|AAI46815.1| 1254|Homo sapiens DOCK9 protein protein. 31 4.2
BC034582-1|AAH34582.1| 98|Homo sapiens keratin associated prot... 31 4.2
AJ406932-1|CAC27571.1| 98|Homo sapiens keratin associated prot... 31 4.2
AY610514-1|AAT37906.1| 1302|Homo sapiens paracingulin protein. 30 5.6
AK057946-1|BAB71619.1| 517|Homo sapiens protein ( Homo sapiens ... 30 5.6
AK027863-1|BAB55415.1| 612|Homo sapiens protein ( Homo sapiens ... 30 5.6
BC093847-1|AAH93847.1| 98|Homo sapiens keratin associated prot... 29 9.8
BC093845-1|AAH93845.1| 98|Homo sapiens keratin associated prot... 29 9.8
BC069448-1|AAH69448.1| 98|Homo sapiens keratin associated prot... 29 9.8
AK131485-1|BAD18630.1| 477|Homo sapiens protein ( Homo sapiens ... 29 9.8
AJ406933-1|CAC27572.1| 98|Homo sapiens keratin associated prot... 29 9.8
>BC050713-1|AAH50713.1| 233|Homo sapiens vacuolar protein sorting
28 homolog (S. cerevisiae) protein.
Length = 233
Score = 230 bits (562), Expect = 3e-60
Identities = 106/151 (70%), Positives = 129/151 (85%)
Frame = +3
Query: 159 RPELYEEIKLYKNAREREKHDNMAELYAVVCTLQHLEKAYMRDCVRAQEYTAACSRLLVQ 338
+PELYEE+KLYKNAREREK+DNMAEL+AVV T+Q LEKAY++DCV EYTAACSRLLVQ
Sbjct: 17 KPELYEEVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDCVSPSEYTAACSRLLVQ 76
Query: 339 YKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNLIKDDKGNTNKYIAEIVSLF 518
YK AF+QVQ E +I+ F K+RLDCP A+ERI+E++P IKDDKGN N+ IA++VSLF
Sbjct: 77 YKAAFRQVQGSEISSIDEFCRKFRLDCPLAMERIKEDRPITIKDDKGNLNRCIADVVSLF 136
Query: 519 ITLMDKLRLEFRAMDMIQPELRDLRDTMDRL 611
IT+MDKLRLE RAMD IQP+LR+L +TM R+
Sbjct: 137 ITVMDKLRLEIRAMDEIQPDLRELMETMHRM 167
>BC019321-1|AAH19321.1| 221|Homo sapiens vacuolar protein sorting
28 homolog (S. cerevisiae) protein.
Length = 221
Score = 230 bits (562), Expect = 3e-60
Identities = 106/151 (70%), Positives = 129/151 (85%)
Frame = +3
Query: 159 RPELYEEIKLYKNAREREKHDNMAELYAVVCTLQHLEKAYMRDCVRAQEYTAACSRLLVQ 338
+PELYEE+KLYKNAREREK+DNMAEL+AVV T+Q LEKAY++DCV EYTAACSRLLVQ
Sbjct: 17 KPELYEEVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDCVSPSEYTAACSRLLVQ 76
Query: 339 YKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNLIKDDKGNTNKYIAEIVSLF 518
YK AF+QVQ E +I+ F K+RLDCP A+ERI+E++P IKDDKGN N+ IA++VSLF
Sbjct: 77 YKAAFRQVQGSEISSIDEFCRKFRLDCPLAMERIKEDRPITIKDDKGNLNRCIADVVSLF 136
Query: 519 ITLMDKLRLEFRAMDMIQPELRDLRDTMDRL 611
IT+MDKLRLE RAMD IQP+LR+L +TM R+
Sbjct: 137 ITVMDKLRLEIRAMDEIQPDLRELMETMHRM 167
>BC006485-1|AAH06485.1| 221|Homo sapiens vacuolar protein sorting
28 homolog (S. cerevisiae) protein.
Length = 221
Score = 230 bits (562), Expect = 3e-60
Identities = 106/151 (70%), Positives = 129/151 (85%)
Frame = +3
Query: 159 RPELYEEIKLYKNAREREKHDNMAELYAVVCTLQHLEKAYMRDCVRAQEYTAACSRLLVQ 338
+PELYEE+KLYKNAREREK+DNMAEL+AVV T+Q LEKAY++DCV EYTAACSRLLVQ
Sbjct: 17 KPELYEEVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDCVSPSEYTAACSRLLVQ 76
Query: 339 YKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNLIKDDKGNTNKYIAEIVSLF 518
YK AF+QVQ E +I+ F K+RLDCP A+ERI+E++P IKDDKGN N+ IA++VSLF
Sbjct: 77 YKAAFRQVQGSEISSIDEFCRKFRLDCPLAMERIKEDRPITIKDDKGNLNRCIADVVSLF 136
Query: 519 ITLMDKLRLEFRAMDMIQPELRDLRDTMDRL 611
IT+MDKLRLE RAMD IQP+LR+L +TM R+
Sbjct: 137 ITVMDKLRLEIRAMDEIQPDLRELMETMHRM 167
>AF316887-1|AAK00314.1| 221|Homo sapiens vacuolar sorting protein
28 protein.
Length = 221
Score = 230 bits (562), Expect = 3e-60
Identities = 106/151 (70%), Positives = 129/151 (85%)
Frame = +3
Query: 159 RPELYEEIKLYKNAREREKHDNMAELYAVVCTLQHLEKAYMRDCVRAQEYTAACSRLLVQ 338
+PELYEE+KLYKNAREREK+DNMAEL+AVV T+Q LEKAY++DCV EYTAACSRLLVQ
Sbjct: 17 KPELYEEVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDCVSPSEYTAACSRLLVQ 76
Query: 339 YKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNLIKDDKGNTNKYIAEIVSLF 518
YK AF+QVQ E +I+ F K+RLDCP A+ERI+E++P IKDDKGN N+ IA++VSLF
Sbjct: 77 YKAAFRQVQGSEISSIDEFCRKFRLDCPLAMERIKEDRPITIKDDKGNLNRCIADVVSLF 136
Query: 519 ITLMDKLRLEFRAMDMIQPELRDLRDTMDRL 611
IT+MDKLRLE RAMD IQP+LR+L +TM R+
Sbjct: 137 ITVMDKLRLEIRAMDEIQPDLRELMETMHRM 167
>AF182844-1|AAF00499.1| 221|Homo sapiens VPS28 protein protein.
Length = 221
Score = 230 bits (562), Expect = 3e-60
Identities = 106/151 (70%), Positives = 129/151 (85%)
Frame = +3
Query: 159 RPELYEEIKLYKNAREREKHDNMAELYAVVCTLQHLEKAYMRDCVRAQEYTAACSRLLVQ 338
+PELYEE+KLYKNAREREK+DNMAEL+AVV T+Q LEKAY++DCV EYTAACSRLLVQ
Sbjct: 17 KPELYEEVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDCVSPSEYTAACSRLLVQ 76
Query: 339 YKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNLIKDDKGNTNKYIAEIVSLF 518
YK AF+QVQ E +I+ F K+RLDCP A+ERI+E++P IKDDKGN N+ IA++VSLF
Sbjct: 77 YKAAFRQVQGSEISSIDEFCRKFRLDCPLAMERIKEDRPITIKDDKGNLNRCIADVVSLF 136
Query: 519 ITLMDKLRLEFRAMDMIQPELRDLRDTMDRL 611
IT+MDKLRLE RAMD IQP+LR+L +TM R+
Sbjct: 137 ITVMDKLRLEIRAMDEIQPDLRELMETMHRM 167
>BC069099-1|AAH69099.1| 98|Homo sapiens keratin associated protein
3-3 protein.
Length = 98
Score = 32.7 bits (71), Expect = 1.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 312 PCIPVLAHNHACMPSPGAEGYRRQHRAQPCYHAFL 208
PC+P ++C P+PG E QPCY L
Sbjct: 60 PCVPTCFLLNSCQPTPGLETLNLTTFTQPCYEPCL 94
>BC118918-1|AAI18919.1| 1302|Homo sapiens cingulin-like 1 protein.
Length = 1302
Score = 31.1 bits (67), Expect = 3.2
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 3/118 (2%)
Frame = +3
Query: 147 MQDTRPELYEEIKLYKNAREREKHDNMAELYAVVCTLQHL--EKAYMRDCVRAQEYTAAC 320
+QD E+++E+ K + +REK + EL LQ L K D +R +E
Sbjct: 703 LQDQLSEMHDELDSAKRSEDREKGALIEELLQAKQDLQDLLIAKEEQEDLLRKRE----- 757
Query: 321 SRLLVQYKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNL-IKDDKGNTNK 491
R L K A K+ + ++ +Y + A E + E N+ + + NT++
Sbjct: 758 -RELTALKGALKEEVSSHDQEMDKLKEQYDAELQALRESVEEATKNVEVLASRSNTSE 814
>BC112049-1|AAI12050.1| 1302|Homo sapiens cingulin-like 1 protein.
Length = 1302
Score = 31.1 bits (67), Expect = 3.2
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 3/118 (2%)
Frame = +3
Query: 147 MQDTRPELYEEIKLYKNAREREKHDNMAELYAVVCTLQHL--EKAYMRDCVRAQEYTAAC 320
+QD E+++E+ K + +REK + EL LQ L K D +R +E
Sbjct: 703 LQDQLSEMHDELDSAKRSEDREKGALIEELLQAKQDLQDLLIAKEEQEDLLRKRE----- 757
Query: 321 SRLLVQYKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNL-IKDDKGNTNK 491
R L K A K+ + ++ +Y + A E + E N+ + + NT++
Sbjct: 758 -RELTALKGALKEEVSSHDQEMDKLKEQYDAELQALRESVEEATKNVEVLASRSNTSE 814
>BC093827-1|AAH93827.1| 1302|Homo sapiens cingulin-like 1 protein.
Length = 1302
Score = 31.1 bits (67), Expect = 3.2
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 3/118 (2%)
Frame = +3
Query: 147 MQDTRPELYEEIKLYKNAREREKHDNMAELYAVVCTLQHL--EKAYMRDCVRAQEYTAAC 320
+QD E+++E+ K + +REK + EL LQ L K D +R +E
Sbjct: 703 LQDQLSEMHDELDSAKRSEDREKGALIEELLQAKQDLQDLLIAKEEQEDLLRKRE----- 757
Query: 321 SRLLVQYKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNL-IKDDKGNTNK 491
R L K A K+ + ++ +Y + A E + E N+ + + NT++
Sbjct: 758 -RELTALKGALKEEVSSHDQEMDKLKEQYDAELQALRESVEEATKNVEVLASRSNTSE 814
>AY274808-1|AAP42073.1| 1302|Homo sapiens KIAA1749 protein protein.
Length = 1302
Score = 31.1 bits (67), Expect = 3.2
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 3/118 (2%)
Frame = +3
Query: 147 MQDTRPELYEEIKLYKNAREREKHDNMAELYAVVCTLQHL--EKAYMRDCVRAQEYTAAC 320
+QD E+++E+ K + +REK + EL LQ L K D +R +E
Sbjct: 703 LQDQLSEMHDELDSAKRSEDREKGALIEELLQAKQDLQDLLIAKEEQEDLLRKRE----- 757
Query: 321 SRLLVQYKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNL-IKDDKGNTNK 491
R L K A K+ + ++ +Y + A E + E N+ + + NT++
Sbjct: 758 -RELTALKGALKEEVSSHDQEMDKLKEQYDAELQALRESVEEATKNVEVLASRSNTSE 814
>AK056673-1|BAB71249.1| 883|Homo sapiens protein ( Homo sapiens cDNA
FLJ32111 fis, clone OCBBF2001528, weakly similar to
MYOSIN HEAVY CHAIN, SMOOTH MUSCLE ISOFORM. ).
Length = 883
Score = 31.1 bits (67), Expect = 3.2
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 3/118 (2%)
Frame = +3
Query: 147 MQDTRPELYEEIKLYKNAREREKHDNMAELYAVVCTLQHL--EKAYMRDCVRAQEYTAAC 320
+QD E+++E+ K + +REK + EL LQ L K D +R +E
Sbjct: 703 LQDQLSEMHDELDSAKRSEDREKGALIEELLQAKQDLQDLLIAKEEQEDLLRKRE----- 757
Query: 321 SRLLVQYKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNL-IKDDKGNTNK 491
R L K A K+ + ++ +Y + A E + E N+ + + NT++
Sbjct: 758 -RELTALKGALKEEVSSHDQEMDKLKEQYDAELQALRESVEEATKNVEVLASRSNTSE 814
>AB051536-1|BAB21840.2| 1047|Homo sapiens KIAA1749 protein protein.
Length = 1047
Score = 31.1 bits (67), Expect = 3.2
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 3/118 (2%)
Frame = +3
Query: 147 MQDTRPELYEEIKLYKNAREREKHDNMAELYAVVCTLQHL--EKAYMRDCVRAQEYTAAC 320
+QD E+++E+ K + +REK + EL LQ L K D +R +E
Sbjct: 448 LQDQLSEMHDELDSAKRSEDREKGALIEELLQAKQDLQDLLIAKEEQEDLLRKRE----- 502
Query: 321 SRLLVQYKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNL-IKDDKGNTNK 491
R L K A K+ + ++ +Y + A E + E N+ + + NT++
Sbjct: 503 -RELTALKGALKEEVSSHDQEMDKLKEQYDAELQALRESVEEATKNVEVLASRSNTSE 559
>BC146814-1|AAI46815.1| 1254|Homo sapiens DOCK9 protein protein.
Length = 1254
Score = 30.7 bits (66), Expect = 4.2
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +3
Query: 162 PELYEEIKLYKNAREREKHDNMAELYAVVCTLQHLEKAYMRDCVRAQ 302
PE Y+EIK+ + EKH + L+ V C RD V Q
Sbjct: 708 PEFYDEIKIELPTQLHEKHHLLLTLFHVSCDNSSKGSTKKRDVVETQ 754
>BC034582-1|AAH34582.1| 98|Homo sapiens keratin associated protein
3-2 protein.
Length = 98
Score = 30.7 bits (66), Expect = 4.2
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
Frame = -1
Query: 351 KPLCTARGDDCMPPC------IPVLAHNHACMPSPGAEGYRRQHRAQPC 223
+P+C D+C PPC +P ++C P+PG E QPC
Sbjct: 44 EPICC---DNCPPPCHIPQPCVPTCFLLNSCQPTPGLETLNLTTFTQPC 89
>AJ406932-1|CAC27571.1| 98|Homo sapiens keratin associated protein
3.2 protein.
Length = 98
Score = 30.7 bits (66), Expect = 4.2
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
Frame = -1
Query: 351 KPLCTARGDDCMPPC------IPVLAHNHACMPSPGAEGYRRQHRAQPC 223
+P+C D+C PPC +P ++C P+PG E QPC
Sbjct: 44 EPICC---DNCPPPCHIPQPCVPTCFLLNSCQPTPGLETLNLTTFTQPC 89
>AY610514-1|AAT37906.1| 1302|Homo sapiens paracingulin protein.
Length = 1302
Score = 30.3 bits (65), Expect = 5.6
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 3/118 (2%)
Frame = +3
Query: 147 MQDTRPELYEEIKLYKNAREREKHDNMAELYAVVCTLQHL--EKAYMRDCVRAQEYTAAC 320
+QD E+++E+ K + +REK + EL LQ L K D +R +E
Sbjct: 703 LQDQLSEMHDELDSAKRSEDREKGALIEELLQAKQDLQDLLIAKEGREDLLRKRE----- 757
Query: 321 SRLLVQYKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNL-IKDDKGNTNK 491
R L K A K+ + ++ +Y + A E + E N+ + + NT++
Sbjct: 758 -RELTALKGALKEEVSSHDQEMDKLKEQYDAELQALRESVEEATKNVEVLASRSNTSE 814
>AK057946-1|BAB71619.1| 517|Homo sapiens protein ( Homo sapiens
cDNA FLJ25217 fis, clone REC08938, highly similar to
Oryctolagus cuniculus Na+/glucose cotransporter-related
protein ).
Length = 517
Score = 30.3 bits (65), Expect = 5.6
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -3
Query: 433 SKAAGQSNLYLATKASILGNS-SACTCLKATLYC 335
S + +S+ YL+T S G S SACTCL YC
Sbjct: 16 STSPQRSSPYLSTFRSATGASGSACTCLSCPCYC 49
>AK027863-1|BAB55415.1| 612|Homo sapiens protein ( Homo sapiens
cDNA FLJ14957 fis, clone PLACE4000009, weakly similar to
MYOSIN HEAVY CHAIN, NONMUSCLE TYPE B. ).
Length = 612
Score = 30.3 bits (65), Expect = 5.6
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 3/118 (2%)
Frame = +3
Query: 147 MQDTRPELYEEIKLYKNAREREKHDNMAELYAVVCTLQHL--EKAYMRDCVRAQEYTAAC 320
+QD E+++E+ K + +REK + EL LQ L K D +R +E
Sbjct: 13 LQDQLSEMHDELDSAKRSEDREKGALIEELLQAKQDLQDLLIAKEGREDLLRKRE----- 67
Query: 321 SRLLVQYKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNL-IKDDKGNTNK 491
R L K A K+ + ++ +Y + A E + E N+ + + NT++
Sbjct: 68 -RELTALKGALKEEVSSHDQEMDKLKEQYDAELQALRESVEEATKNVEVLASRSNTSE 124
>BC093847-1|AAH93847.1| 98|Homo sapiens keratin associated protein
3-3 protein.
Length = 98
Score = 29.5 bits (63), Expect = 9.8
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 312 PCIPVLAHNHACMPSPGAEGYRRQHRAQPC 223
PC+P ++C P+PG E QPC
Sbjct: 60 PCVPTCFLLNSCQPTPGLETLNLTTFTQPC 89
>BC093845-1|AAH93845.1| 98|Homo sapiens keratin associated protein
3-3 protein.
Length = 98
Score = 29.5 bits (63), Expect = 9.8
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 312 PCIPVLAHNHACMPSPGAEGYRRQHRAQPC 223
PC+P ++C P+PG E QPC
Sbjct: 60 PCVPTCFLLNSCQPTPGLETLNLTTFTQPC 89
>BC069448-1|AAH69448.1| 98|Homo sapiens keratin associated protein
3-3 protein.
Length = 98
Score = 29.5 bits (63), Expect = 9.8
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 312 PCIPVLAHNHACMPSPGAEGYRRQHRAQPC 223
PC+P ++C P+PG E QPC
Sbjct: 60 PCVPTCFLLNSCQPTPGLETLNLTTFTQPC 89
>AK131485-1|BAD18630.1| 477|Homo sapiens protein ( Homo sapiens
cDNA FLJ16664 fis, clone THYMU2006001, weakly similar
to ZINC-BINDING PROTEIN A33. ).
Length = 477
Score = 29.5 bits (63), Expect = 9.8
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Frame = +3
Query: 228 AELYAVVCTLQHLEKAYMRD-CVRAQEYTAACSRLLVQYKVAFKQVQA---DEFPNIEAF 395
AE +A + T +K +++ C+R ++ A LV+ + +Q + ++ + F
Sbjct: 123 AEAHARLKTQLPQQKLQLQEACMRKEKSVAVLEHQLVEVEETVRQFRGAVGEQLGKMRVF 182
Query: 396 VAKYR--LDCPAALERIRENKPNLIKDDKGNTNKYIAEI 506
+A LDC A ER+R ++ + G+ N Y+ ++
Sbjct: 183 LAALEGSLDCEA--ERVRGEAGVALRRELGSLNSYLEQL 219
>AJ406933-1|CAC27572.1| 98|Homo sapiens keratin associated protein
3.3 protein.
Length = 98
Score = 29.5 bits (63), Expect = 9.8
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -1
Query: 312 PCIPVLAHNHACMPSPGAEGYRRQHRAQPC 223
PC+P ++C P+PG E QPC
Sbjct: 60 PCVPTCFLLNSCQPTPGLETLNLTTFTQPC 89
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,731,886
Number of Sequences: 237096
Number of extensions: 1744968
Number of successful extensions: 8396
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 8206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8396
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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