Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24e06
         (612 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060620-1|AAL28168.1|  210|Drosophila melanogaster GH04443p pro...   246   2e-65
AE013599-580|AAF59143.1|  210|Drosophila melanogaster CG12770-PA...   246   2e-65
AE013599-3289|AAS64755.1|  352|Drosophila melanogaster CG9294-PB...    36   0.057
AY058503-1|AAL13732.1|  627|Drosophila melanogaster LD21207p pro...    29   4.9  
AE014297-4718|AAF57128.1|  641|Drosophila melanogaster CG18729-P...    29   4.9  

>AY060620-1|AAL28168.1|  210|Drosophila melanogaster GH04443p
           protein.
          Length = 210

 Score =  246 bits (602), Expect = 2e-65
 Identities = 110/155 (70%), Positives = 136/155 (87%)
 Frame = +3

Query: 147 MQDTRPELYEEIKLYKNAREREKHDNMAELYAVVCTLQHLEKAYMRDCVRAQEYTAACSR 326
           MQ+  PELYEE+KL++NAREREK+DNMA+LYA++ T+Q LEKAY+RDC+  QEYTAACS+
Sbjct: 1   MQEQSPELYEEVKLFRNAREREKYDNMADLYAIINTIQQLEKAYIRDCITPQEYTAACSK 60

Query: 327 LLVQYKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNLIKDDKGNTNKYIAEI 506
            LVQYKVAFKQVQ DEFP++E FV K+RLDCPAALERIRE++P  I+DDKGNT+K IAEI
Sbjct: 61  YLVQYKVAFKQVQCDEFPSVETFVKKFRLDCPAALERIREDRPITIRDDKGNTSKCIAEI 120

Query: 507 VSLFITLMDKLRLEFRAMDMIQPELRDLRDTMDRL 611
           VSLFIT+MDKLRL+   MD +QP+++DL D M+RL
Sbjct: 121 VSLFITIMDKLRLQINTMDALQPDVKDLADNMNRL 155


>AE013599-580|AAF59143.1|  210|Drosophila melanogaster CG12770-PA
           protein.
          Length = 210

 Score =  246 bits (602), Expect = 2e-65
 Identities = 110/155 (70%), Positives = 136/155 (87%)
 Frame = +3

Query: 147 MQDTRPELYEEIKLYKNAREREKHDNMAELYAVVCTLQHLEKAYMRDCVRAQEYTAACSR 326
           MQ+  PELYEE+KL++NAREREK+DNMA+LYA++ T+Q LEKAY+RDC+  QEYTAACS+
Sbjct: 1   MQEQSPELYEEVKLFRNAREREKYDNMADLYAIINTIQQLEKAYIRDCITPQEYTAACSK 60

Query: 327 LLVQYKVAFKQVQADEFPNIEAFVAKYRLDCPAALERIRENKPNLIKDDKGNTNKYIAEI 506
            LVQYKVAFKQVQ DEFP++E FV K+RLDCPAALERIRE++P  I+DDKGNT+K IAEI
Sbjct: 61  YLVQYKVAFKQVQCDEFPSVETFVKKFRLDCPAALERIREDRPITIRDDKGNTSKCIAEI 120

Query: 507 VSLFITLMDKLRLEFRAMDMIQPELRDLRDTMDRL 611
           VSLFIT+MDKLRL+   MD +QP+++DL D M+RL
Sbjct: 121 VSLFITIMDKLRLQINTMDALQPDVKDLADNMNRL 155


>AE013599-3289|AAS64755.1|  352|Drosophila melanogaster CG9294-PB,
           isoform B protein.
          Length = 352

 Score = 35.5 bits (78), Expect = 0.057
 Identities = 19/64 (29%), Positives = 34/64 (53%)
 Frame = +1

Query: 193 KMRVNEKSMITWLSSMLSSVPFSTWRRHTCVIVCEHRNTRRHAVVSSCSTKWLSNKYRLM 372
           ++R NE  +  WL S+L  +P +T    T V+      TRR    SS +++  +++  + 
Sbjct: 22  RIRPNEGKIFEWLGSIL--LPSTTTTTSTPVVATTSTTTRRTTTTSSTTSRTTTSRTTVA 79

Query: 373 SFPI 384
           +FPI
Sbjct: 80  NFPI 83


>AY058503-1|AAL13732.1|  627|Drosophila melanogaster LD21207p
           protein.
          Length = 627

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +3

Query: 189 YKNAR--EREKHDNMAELYAVVCTLQHLEKAYMRDCVRAQEYTAACSRLL 332
           +KN+   E E  + +++L+ + CTL+HL   ++     A  Y   CS LL
Sbjct: 482 FKNSHFDEHESTERISKLFQIHCTLEHLLMMHIH-LNLANVYNDVCSELL 530


>AE014297-4718|AAF57128.1|  641|Drosophila melanogaster CG18729-PA
           protein.
          Length = 641

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +3

Query: 189 YKNAR--EREKHDNMAELYAVVCTLQHLEKAYMRDCVRAQEYTAACSRLL 332
           +KN+   E E  + +++L+ + CTL+HL   ++     A  Y   CS LL
Sbjct: 496 FKNSHFDEHESTERISKLFQIHCTLEHLLMMHIH-LNLANVYNDVCSELL 544


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,775,424
Number of Sequences: 53049
Number of extensions: 552709
Number of successful extensions: 1416
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1416
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)