Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24e04
         (610 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    27   0.63 
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            24   3.3  
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    24   4.4  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    23   5.8  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   5.8  
AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    23   5.8  
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    23   5.8  
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    23   5.8  

>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 26.6 bits (56), Expect = 0.63
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +2

Query: 134  YNYYVERINKRISSTSLSYDSGDEANDT 217
            YNYY +  +   SS+S S  S DE++D+
Sbjct: 1911 YNYYYKDFDLSDSSSSESSSSSDESDDS 1938


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 191 DSGDEANDTRVPYEQKSDEGN 253
           D GDEAND R  +  K+   N
Sbjct: 99  DEGDEANDARPRFGSKAAAAN 119


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +2

Query: 140 YYVERINKRISSTSLSYDSGDEANDT 217
           +Y+   ++ I+S+    +  D+ANDT
Sbjct: 28  HYINNASRSINSSCAQINESDKANDT 53


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -2

Query: 420 CDALSSAAMLIVSEAGTVLPPEAGMKLT 337
           C  +SS A+L     G  LPP++G KLT
Sbjct: 242 CVLISSMALL-----GFTLPPDSGEKLT 264


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -2

Query: 420 CDALSSAAMLIVSEAGTVLPPEAGMKLT 337
           C  +SS A+L     G  LPP++G KLT
Sbjct: 242 CVLISSMALL-----GFTLPPDSGEKLT 264


>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 85  RNIRYYYLHALVHRDRVQLLRGAH 156
           R++RY YL A+  R+  Q + G H
Sbjct: 446 RSVRYCYLKAVALREGNQRVLGLH 469


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 85  RNIRYYYLHALVHRDRVQLLRGAH 156
           R++RY YL A+  R+  Q + G H
Sbjct: 422 RSVRYCYLKAVALREGNQRVLGLH 445


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 85  RNIRYYYLHALVHRDRVQLLRGAH 156
           R++RY YL A+  R+  Q + G H
Sbjct: 419 RSVRYCYLKAVALREGNQRVLGLH 442


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 594,227
Number of Sequences: 2352
Number of extensions: 12197
Number of successful extensions: 27
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59291487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)