Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24d23
(544 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-3889|AAF47218.2| 1556|Drosophila melanogaster CG13582-P... 33 0.19
X96419-1|CAA65279.1| 382|Drosophila melanogaster SOX-domain pro... 33 0.33
U68056-1|AAB49673.1| 382|Drosophila melanogaster SOX HMG domain... 33 0.33
BT030105-1|ABN49244.1| 382|Drosophila melanogaster FI01304p pro... 33 0.33
AY118670-1|AAM50530.1| 381|Drosophila melanogaster AT02631p pro... 33 0.33
AE014296-2364|AAF49753.1| 382|Drosophila melanogaster CG5893-PA... 33 0.33
M86328-1|AAA28469.1| 54|Drosophila melanogaster DM10 protein. 31 1.0
AY058313-1|AAL13542.1| 571|Drosophila melanogaster GH07353p pro... 31 1.0
AE014296-2363|AAF49754.2| 571|Drosophila melanogaster CG32139-P... 31 1.0
M86333-1|AAA28474.1| 54|Drosophila melanogaster DM63 protein. 31 1.3
M86330-1|AAA28471.1| 54|Drosophila melanogaster DM23 protein. 30 1.8
M86331-1|AAA28472.1| 54|Drosophila melanogaster DM33 protein. 30 2.4
M86329-1|AAA28470.1| 54|Drosophila melanogaster DM17 protein. 30 2.4
M86332-1|AAA28473.1| 54|Drosophila melanogaster DM36 protein. 29 4.1
BT022137-1|AAY51532.1| 388|Drosophila melanogaster IP01552p pro... 29 4.1
AY094960-1|AAM11313.1| 964|Drosophila melanogaster SD03277p pro... 29 4.1
AE014298-2197|AAF48495.2| 5146|Drosophila melanogaster CG8184-PB... 29 4.1
AE014296-2362|AAF49756.1| 388|Drosophila melanogaster CG7345-PA... 29 4.1
AY051796-1|AAK93220.1| 800|Drosophila melanogaster LD31211p pro... 29 5.4
AJ238970-1|CAB53186.1| 800|Drosophila melanogaster cap binding ... 29 5.4
AE014298-657|AAF45970.1| 800|Drosophila melanogaster CG7035-PB,... 29 5.4
AE014298-656|AAN09124.1| 800|Drosophila melanogaster CG7035-PA,... 29 5.4
M86334-1|AAA28475.1| 54|Drosophila melanogaster DM64 protein. 28 7.2
AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p pro... 28 9.5
AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptio... 28 9.5
AE014297-2514|AAF55548.1| 935|Drosophila melanogaster CG14309-P... 28 9.5
AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD... 28 9.5
>AE013599-3889|AAF47218.2| 1556|Drosophila melanogaster CG13582-PA
protein.
Length = 1556
Score = 33.5 bits (73), Expect = 0.19
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +1
Query: 160 SEYRTLPTYEKGLYEEVFKRHYSLHDNELLKCRWTQYKKHLEGRVFAPFQFPD 318
+ YR L T++ GLYE FKR + NEL+ R YK + + +++ F++ D
Sbjct: 497 NRYRAL-THQSGLYEFWFKRSF----NELVALRKIHYKVNGDHQIYRDFEWQD 544
>X96419-1|CAA65279.1| 382|Drosophila melanogaster SOX-domain
protein protein.
Length = 382
Score = 32.7 bits (71), Expect = 0.33
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1
Query: 100 EIKRKKPYDHVNEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNE 243
+I + P H N EI+KR+G+E++ L EK + + KR +LH E
Sbjct: 159 QIAKDNPKMH-NSEISKRLGAEWKLLAESEKRPFIDEAKRLRALHMKE 205
>U68056-1|AAB49673.1| 382|Drosophila melanogaster SOX HMG domain
protein protein.
Length = 382
Score = 32.7 bits (71), Expect = 0.33
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1
Query: 100 EIKRKKPYDHVNEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNE 243
+I + P H N EI+KR+G+E++ L EK + + KR +LH E
Sbjct: 159 QIAKDNPKMH-NSEISKRLGAEWKLLAESEKRPFIDEAKRLRALHMKE 205
>BT030105-1|ABN49244.1| 382|Drosophila melanogaster FI01304p
protein.
Length = 382
Score = 32.7 bits (71), Expect = 0.33
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1
Query: 100 EIKRKKPYDHVNEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNE 243
+I + P H N EI+KR+G+E++ L EK + + KR +LH E
Sbjct: 159 QIAKDNPKMH-NSEISKRLGAEWKLLAESEKRPFIDEAKRLRALHMKE 205
>AY118670-1|AAM50530.1| 381|Drosophila melanogaster AT02631p
protein.
Length = 381
Score = 32.7 bits (71), Expect = 0.33
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1
Query: 100 EIKRKKPYDHVNEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNE 243
+I + P H N EI+KR+G+E++ L EK + + KR +LH E
Sbjct: 158 QIAKDNPKMH-NSEISKRLGAEWKLLAESEKRPFIDEAKRLRALHMKE 204
>AE014296-2364|AAF49753.1| 382|Drosophila melanogaster CG5893-PA
protein.
Length = 382
Score = 32.7 bits (71), Expect = 0.33
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1
Query: 100 EIKRKKPYDHVNEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNE 243
+I + P H N EI+KR+G+E++ L EK + + KR +LH E
Sbjct: 159 QIAKDNPKMH-NSEISKRLGAEWKLLAESEKRPFIDEAKRLRALHMKE 205
>M86328-1|AAA28469.1| 54|Drosophila melanogaster DM10 protein.
Length = 54
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +1
Query: 109 RKKPYDHVNEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNE 243
++ P H N EI+KR+G+E++ L EK + + KR +LH E
Sbjct: 3 QENPKMH-NSEISKRLGAEWKLLADSEKRPFIDEAKRLRALHMKE 46
>AY058313-1|AAL13542.1| 571|Drosophila melanogaster GH07353p
protein.
Length = 571
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +1
Query: 100 EIKRKKPYDHVNEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNE 243
+I + P H N EI+KR+G+E++ L EK + + KR ++H E
Sbjct: 265 KIAQDNPKMH-NSEISKRLGAEWKLLTEEEKRPFIDEAKRLRAMHMKE 311
>AE014296-2363|AAF49754.2| 571|Drosophila melanogaster CG32139-PA
protein.
Length = 571
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +1
Query: 100 EIKRKKPYDHVNEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNE 243
+I + P H N EI+KR+G+E++ L EK + + KR ++H E
Sbjct: 265 KIAQDNPKMH-NSEISKRLGAEWKLLTEEEKRPFIDEAKRLRAMHMKE 311
>M86333-1|AAA28474.1| 54|Drosophila melanogaster DM63 protein.
Length = 54
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 133 NEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNE 243
N EI+KR+G+E++ L EK + + KR +LH E
Sbjct: 10 NSEISKRLGAEWKLLAESEKRPFIDEAKRLRALHMKE 46
>M86330-1|AAA28471.1| 54|Drosophila melanogaster DM23 protein.
Length = 54
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +1
Query: 109 RKKPYDHVNEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLH 234
++ P H N EI+KR+G+E++ L EK + + KR +LH
Sbjct: 3 QENPKMH-NSEISKRLGAEWKLLAESEKRPFIDEAKRLRALH 43
>M86331-1|AAA28472.1| 54|Drosophila melanogaster DM33 protein.
Length = 54
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +1
Query: 109 RKKPYDHVNEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDN 240
++ P H N EI+KR+G+E++ L EK + KR +LH N
Sbjct: 3 QENPKMH-NSEISKRLGAEWKLLAESEKRPLIDEAKRLRALHMN 45
>M86329-1|AAA28470.1| 54|Drosophila melanogaster DM17 protein.
Length = 54
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 133 NEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNE 243
N EI+KR+G+E++ L EK Y + KR + H E
Sbjct: 10 NSEISKRLGAEWKLLSEAEKRPYIDEAKRLRAQHMKE 46
>M86332-1|AAA28473.1| 54|Drosophila melanogaster DM36 protein.
Length = 54
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 133 NEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNE 243
N I+KR+G+E++ L EK + + KR +LH E
Sbjct: 10 NSHISKRLGAEWKLLAASEKRPFIDEAKRLRALHMKE 46
>BT022137-1|AAY51532.1| 388|Drosophila melanogaster IP01552p
protein.
Length = 388
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 133 NEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNE 243
N EI+KR+G+E++ L +K + + KR +LH E
Sbjct: 148 NSEISKRLGAEWKLLTEGQKRPFIDEAKRLRALHMKE 184
>AY094960-1|AAM11313.1| 964|Drosophila melanogaster SD03277p
protein.
Length = 964
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +1
Query: 226 SLHDNELLKCRWTQ-YKKHLEGRVFAPFQFPDVRDLHFYNCAIRFLPSESIHRRTKYGFK 402
++HDN+LL+C +T+ + KH+ G+ + +D FY + +L I + G++
Sbjct: 707 AVHDNKLLECYFTRSFYKHILGKQVKHTDM-ESQDYEFYK-GLDYLMKNDI---STLGYE 761
Query: 403 LKPGPGVDDFG 435
L V +FG
Sbjct: 762 LTFSTEVQEFG 772
>AE014298-2197|AAF48495.2| 5146|Drosophila melanogaster CG8184-PB
protein.
Length = 5146
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +1
Query: 226 SLHDNELLKCRWTQ-YKKHLEGRVFAPFQFPDVRDLHFYNCAIRFLPSESIHRRTKYGFK 402
++HDN+LL+C +T+ + KH+ G+ + +D FY + +L I + G++
Sbjct: 4889 AVHDNKLLECYFTRSFYKHILGKQVKHTDM-ESQDYEFYK-GLDYLMKNDI---STLGYE 4943
Query: 403 LKPGPGVDDFG 435
L V +FG
Sbjct: 4944 LTFSTEVQEFG 4954
>AE014296-2362|AAF49756.1| 388|Drosophila melanogaster CG7345-PA
protein.
Length = 388
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 133 NEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNE 243
N EI+KR+G+E++ L +K + + KR +LH E
Sbjct: 148 NSEISKRLGAEWKLLTEGQKRPFIDEAKRLRALHMKE 184
>AY051796-1|AAK93220.1| 800|Drosophila melanogaster LD31211p
protein.
Length = 800
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 91 DCAEIKRKKPYDHVN---EEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNELLK 252
D + KRKKP H + EE+ +R+ + +K L+ VF+R + LL+
Sbjct: 681 DDSSHKRKKPITHADKPSEEVVERMEEKLEAANVNQKRLFLIVFQRFIMILSEHLLR 737
>AJ238970-1|CAB53186.1| 800|Drosophila melanogaster cap binding
protein 80 protein.
Length = 800
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 91 DCAEIKRKKPYDHVN---EEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNELLK 252
D + KRKKP H + EE+ +R+ + +K L+ VF+R + LL+
Sbjct: 681 DDSSHKRKKPITHADKPSEEVVERMEEKLEAANVNQKRLFLIVFQRFIMILSEHLLR 737
>AE014298-657|AAF45970.1| 800|Drosophila melanogaster CG7035-PB,
isoform B protein.
Length = 800
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 91 DCAEIKRKKPYDHVN---EEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNELLK 252
D + KRKKP H + EE+ +R+ + +K L+ VF+R + LL+
Sbjct: 681 DDSSHKRKKPITHADKPSEEVVERMEEKLEAANVNQKRLFLIVFQRFIMILSEHLLR 737
>AE014298-656|AAN09124.1| 800|Drosophila melanogaster CG7035-PA,
isoform A protein.
Length = 800
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +1
Query: 91 DCAEIKRKKPYDHVN---EEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNELLK 252
D + KRKKP H + EE+ +R+ + +K L+ VF+R + LL+
Sbjct: 681 DDSSHKRKKPITHADKPSEEVVERMEEKLEAANVNQKRLFLIVFQRFIMILSEHLLR 737
>M86334-1|AAA28475.1| 54|Drosophila melanogaster DM64 protein.
Length = 54
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 133 NEEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNE 243
N EI+KR+G+E++ L EK + + KR +H E
Sbjct: 10 NSEISKRLGAEWKDLSESEKRPFIDEAKRLRLVHMKE 46
>AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p protein.
Length = 1153
Score = 27.9 bits (59), Expect = 9.5
Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 10/158 (6%)
Frame = +1
Query: 61 MEYTLKDIYADCAEIKRKKPY--DHVN-EEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSL 231
M+ LK YAD +++ Y HV + + + + P Y + EE+ +
Sbjct: 974 MKAELKPPYADTPALRQLSEYARPHVAFSPVEQMVPYHHPMGPMYRERELEEIKNAQAAA 1033
Query: 232 HDNELLKCRWTQY-KKHLEGRVFAPFQFPDVRDLHFYNCAIR------FLPSESIHRRTK 390
L W +Y ++ + F + P + + I P E + + +
Sbjct: 1034 ASQSRLDPHWMEYYRRGIHPSQFPLYANPAISQMERERLGIPPPHHVGLDPGEHMPQPPE 1093
Query: 391 YGFKLKPGPGVDDFGQMPIPQELIIKRF*TNLLLRCYY 504
GF+L P + GQ P P LI + +++LLR Y
Sbjct: 1094 AGFQLPP-----NVGQYPRPNMLIPREPHSDVLLRMSY 1126
>AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptional
corepressor Atro protein.
Length = 1985
Score = 27.9 bits (59), Expect = 9.5
Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 10/158 (6%)
Frame = +1
Query: 61 MEYTLKDIYADCAEIKRKKPY--DHVN-EEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSL 231
M+ LK YAD +++ Y HV + + + + P Y + EE+ +
Sbjct: 1806 MKAELKPPYADTPALRQLSEYARPHVAFSPVEQMVPYHHPMGPMYRERELEEIKNAQAAA 1865
Query: 232 HDNELLKCRWTQY-KKHLEGRVFAPFQFPDVRDLHFYNCAIR------FLPSESIHRRTK 390
L W +Y ++ + F + P + + I P E + + +
Sbjct: 1866 ASQSRLDPHWMEYYRRGIHPSQFPLYANPAISQMERERLGIPPPHHVGLDPGEHMPQPPE 1925
Query: 391 YGFKLKPGPGVDDFGQMPIPQELIIKRF*TNLLLRCYY 504
GF+L P + GQ P P LI + +++LLR Y
Sbjct: 1926 AGFQLPP-----NVGQYPRPNMLIPREPHSDVLLRMSY 1958
>AE014297-2514|AAF55548.1| 935|Drosophila melanogaster CG14309-PA
protein.
Length = 935
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +1
Query: 106 KRKKP---YDHVNEE-IAKRIGSEYRTLPTYEKGLYEEVFKRHYSLHDNEL 246
K+ KP +D +EE KRIG + +PTY + +V +H D E+
Sbjct: 547 KKNKPLFDFDEFDEEKFFKRIGEKSEEIPTYTRLPEGDVHLKHIETVDGEV 597
>AE014296-1460|AAS65054.1| 1985|Drosophila melanogaster CG6964-PD,
isoform D protein.
Length = 1985
Score = 27.9 bits (59), Expect = 9.5
Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 10/158 (6%)
Frame = +1
Query: 61 MEYTLKDIYADCAEIKRKKPY--DHVN-EEIAKRIGSEYRTLPTYEKGLYEEVFKRHYSL 231
M+ LK YAD +++ Y HV + + + + P Y + EE+ +
Sbjct: 1806 MKAELKPPYADTPALRQLSEYARPHVAFSPVEQMVPYHHPMGPMYRERELEEIKNAQAAA 1865
Query: 232 HDNELLKCRWTQY-KKHLEGRVFAPFQFPDVRDLHFYNCAIR------FLPSESIHRRTK 390
L W +Y ++ + F + P + + I P E + + +
Sbjct: 1866 ASQSRLDPHWMEYYRRGIHPSQFPLYANPAISQMERERLGIPPPHHVGLDPGEHMPQPPE 1925
Query: 391 YGFKLKPGPGVDDFGQMPIPQELIIKRF*TNLLLRCYY 504
GF+L P + GQ P P LI + +++LLR Y
Sbjct: 1926 AGFQLPP-----NVGQYPRPNMLIPREPHSDVLLRMSY 1958
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,032,068
Number of Sequences: 53049
Number of extensions: 444775
Number of successful extensions: 1248
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1247
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2074444800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -