Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24d18
         (661 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39645-6|AAA80366.1|  368|Caenorhabditis elegans Heat shock prot...    38   0.008
U41109-5|AAB37035.1|  149|Caenorhabditis elegans Heat shock prot...    35   0.059
U41109-4|AAQ62453.1|  148|Caenorhabditis elegans Heat shock prot...    35   0.059
Z77657-3|CAB01147.1|  147|Caenorhabditis elegans Hypothetical pr...    31   0.55 
Z82286-3|CAB05309.1|  781|Caenorhabditis elegans Hypothetical pr...    31   0.72 
Z50177-3|CAA90545.2|  765|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z47357-12|CAA87429.2|  205|Caenorhabditis elegans Hypothetical p...    29   3.9  
Z30974-3|CAA83227.2|  205|Caenorhabditis elegans Hypothetical pr...    29   3.9  
AF040661-8|AAG24222.1|  327|Caenorhabditis elegans Hypothetical ...    27   8.9  

>U39645-6|AAA80366.1|  368|Caenorhabditis elegans Heat shock protein
           protein 43 protein.
          Length = 368

 Score = 37.5 bits (83), Expect = 0.008
 Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
 Frame = +3

Query: 33  YLCKLHP-FISAIVPQTRNLRSNIKIGKDKFQLSVDVHKFNKDELRVKARPDCLVIEGKH 209
           Y   L+P +   I  +  ++ SN+     +F + +D ++F  +E++VK   D L+IEG+H
Sbjct: 84  YWMNLYPRWAEPIFKEGIDVNSNVVNDDRRFAVDMDCYQFRPEEIQVKTLDDTLMIEGRH 143


>U41109-5|AAB37035.1|  149|Caenorhabditis elegans Heat shock protein
           protein 17,isoform a protein.
          Length = 149

 Score = 34.7 bits (76), Expect = 0.059
 Identities = 15/33 (45%), Positives = 23/33 (69%)
 Frame = +3

Query: 117 KFQLSVDVHKFNKDELRVKARPDCLVIEGKHYE 215
           ++ +SVDV +F  +EL+V    + L+IEGKH E
Sbjct: 56  EYNVSVDVSQFEPEELKVNIVDNQLIIEGKHNE 88


>U41109-4|AAQ62453.1|  148|Caenorhabditis elegans Heat shock protein
           protein 17,isoform b protein.
          Length = 148

 Score = 34.7 bits (76), Expect = 0.059
 Identities = 15/33 (45%), Positives = 23/33 (69%)
 Frame = +3

Query: 117 KFQLSVDVHKFNKDELRVKARPDCLVIEGKHYE 215
           ++ +SVDV +F  +EL+V    + L+IEGKH E
Sbjct: 55  EYNVSVDVSQFEPEELKVNIVDNQLIIEGKHNE 87


>Z77657-3|CAB01147.1|  147|Caenorhabditis elegans Hypothetical
           protein F08H9.4 protein.
          Length = 147

 Score = 31.5 bits (68), Expect = 0.55
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = +3

Query: 42  KLHPFISAIVPQTRNLRSNIKIGKDKFQLSVDVHKFNKDELRVKARPDCLVIEGKH 209
           +L P      P T +  S I    DKF ++++V  F  +EL+V      L I+G+H
Sbjct: 28  RLMPISGTFNPMTDD--SEIMNSNDKFAVNLNVSNFKPEELKVNLEGRQLSIQGEH 81


>Z82286-3|CAB05309.1|  781|Caenorhabditis elegans Hypothetical
           protein W02A2.6 protein.
          Length = 781

 Score = 31.1 bits (67), Expect = 0.72
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 312 LKPTNLVNLHQELTN*NHPNYPSYLNF 232
           L P N +N+H+EL N     YP ++NF
Sbjct: 706 LLPNNRLNIHKELLNEAEARYPEWVNF 732


>Z50177-3|CAA90545.2|  765|Caenorhabditis elegans Hypothetical
           protein F46G10.5 protein.
          Length = 765

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 10/28 (35%), Positives = 22/28 (78%)
 Frame = +3

Query: 75  QTRNLRSNIKIGKDKFQLSVDVHKFNKD 158
           +T+++++++K+ ++  Q +VDVH  NKD
Sbjct: 135 ETKHVKADLKLYEELMQNAVDVHNANKD 162


>Z47357-12|CAA87429.2|  205|Caenorhabditis elegans Hypothetical
           protein ZK1128.7 protein.
          Length = 205

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 120 FQLSVDVHKFNKDELRVKARPDCLVIEGKHYES 218
           F + +DV  F  +E++V    D L I G+ +ES
Sbjct: 104 FTIEIDVFHFMPEEIKVVLTDDTLSISGERFES 136


>Z30974-3|CAA83227.2|  205|Caenorhabditis elegans Hypothetical
           protein ZK1128.7 protein.
          Length = 205

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 120 FQLSVDVHKFNKDELRVKARPDCLVIEGKHYES 218
           F + +DV  F  +E++V    D L I G+ +ES
Sbjct: 104 FTIEIDVFHFMPEEIKVVLTDDTLSISGERFES 136


>AF040661-8|AAG24222.1|  327|Caenorhabditis elegans Hypothetical
           protein W10G11.16 protein.
          Length = 327

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 374 YEYNNKLKYLCNCTTLEYPHKKRT 445
           YE   K+K  CN    +YPH K+T
Sbjct: 72  YETRVKIKPSCNLILCKYPHDKQT 95


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,919,155
Number of Sequences: 27780
Number of extensions: 232400
Number of successful extensions: 559
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 559
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)