Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24d14
         (620 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    25   1.9  

>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 11/39 (28%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
 Frame = +3

Query: 432 WKEAIDAKCKKLW-EECSTEAANRNTQAIRQAFKEFSVV 545
           W E++  +C+K W   C     NR   A R    + + V
Sbjct: 778 WAESLKFECRKQWLRRCHRPLVNRVISAFRSTSHDAACV 816



 Score = 23.0 bits (47), Expect = 7.8
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 201 LKVLAGLEPRLKGGGSDWYIPPE 269
           L   AGLE  L   G D ++ PE
Sbjct: 148 LAAFAGLEMVLMNNGQDTFVTPE 170


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,181
Number of Sequences: 2352
Number of extensions: 13556
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)