Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24d14
(620 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75541-1|CAA99853.3| 1119|Caenorhabditis elegans Hypothetical pr... 33 0.12
DQ178237-1|ABA18179.1| 1161|Caenorhabditis elegans sodium depend... 33 0.12
AY887903-1|AAX34415.1| 1119|Caenorhabditis elegans anion transpo... 33 0.12
AF004926-1|AAC16758.1| 1119|Caenorhabditis elegans HCO3 transpor... 33 0.12
AY714241-1|AAV68307.1| 529|Caenorhabditis elegans SPD-1 protein. 32 0.29
AC024756-3|AAT81176.1| 529|Caenorhabditis elegans Spindle defec... 32 0.29
Z83107-3|CAB05500.1| 529|Caenorhabditis elegans Hypothetical pr... 30 1.2
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 2.0
Z72508-7|CAA96642.1| 336|Caenorhabditis elegans Hypothetical pr... 28 4.7
AF016665-3|AAC71182.3| 330|Caenorhabditis elegans Nuclear hormo... 28 4.7
AF016654-8|AAB66025.2| 331|Caenorhabditis elegans Hypothetical ... 28 4.7
AC006630-4|AAK68324.1| 311|Caenorhabditis elegans Hypothetical ... 28 4.7
Z68161-11|CAA92300.1| 347|Caenorhabditis elegans Hypothetical p... 28 6.2
Z68159-12|CAA92289.1| 347|Caenorhabditis elegans Hypothetical p... 28 6.2
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 28 6.2
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 6.2
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 6.2
AC024830-4|AAF59603.1| 211|Caenorhabditis elegans Hypothetical ... 28 6.2
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g... 27 8.2
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 27 8.2
>Z75541-1|CAA99853.3| 1119|Caenorhabditis elegans Hypothetical
protein F52B5.1 protein.
Length = 1119
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +3
Query: 114 RQQVPTQSVMIDKMSKPLAEVYFKSMTPKLKVLAGLEPRLKGGGSDWYIPPED 272
RQ + +VMI S +++ TPKL V + P +G G W+IPP D
Sbjct: 679 RQLLSDFAVMIAIASMTFVDIFVGVNTPKLNVPSTFRPTWEGRG--WFIPPFD 729
>DQ178237-1|ABA18179.1| 1161|Caenorhabditis elegans sodium dependent
chloride bicarbonateanion exchanger alternative variant
a protein.
Length = 1161
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +3
Query: 114 RQQVPTQSVMIDKMSKPLAEVYFKSMTPKLKVLAGLEPRLKGGGSDWYIPPED 272
RQ + +VMI S +++ TPKL V + P +G G W+IPP D
Sbjct: 721 RQLLSDFAVMIAIASMTFVDIFVGVNTPKLNVPSTFRPTWEGRG--WFIPPFD 771
>AY887903-1|AAX34415.1| 1119|Caenorhabditis elegans anion
transporter ABTS-1 protein.
Length = 1119
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +3
Query: 114 RQQVPTQSVMIDKMSKPLAEVYFKSMTPKLKVLAGLEPRLKGGGSDWYIPPED 272
RQ + +VMI S +++ TPKL V + P +G G W+IPP D
Sbjct: 679 RQLLSDFAVMIAIASMTFVDIFVGVNTPKLNVPSTFRPTWEGRG--WFIPPFD 729
>AF004926-1|AAC16758.1| 1119|Caenorhabditis elegans HCO3 transporter
protein.
Length = 1119
Score = 33.5 bits (73), Expect = 0.12
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +3
Query: 114 RQQVPTQSVMIDKMSKPLAEVYFKSMTPKLKVLAGLEPRLKGGGSDWYIPPED 272
RQ + +VMI S +++ TPKL V + P +G G W+IPP D
Sbjct: 679 RQLLSDFAVMIAIASMTFVDIFVGVNTPKLNVPSTFRPTWEGRG--WFIPPFD 729
>AY714241-1|AAV68307.1| 529|Caenorhabditis elegans SPD-1 protein.
Length = 529
Score = 32.3 bits (70), Expect = 0.29
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = +3
Query: 351 FGERIVEA---HHMEMEREKDRILHDNDVKWKEAIDAKCKKLWEECSTEAANRNTQAIRQ 521
F ER++++ +H E+E L D + +W E + ++LWE+C A+R+ I +
Sbjct: 222 FSERLLDSLQSYHSELEPLYKHWLEDIEFRWTEK-HQQLQELWEKCLVSEADRHYSPIFE 280
Query: 522 AFK 530
K
Sbjct: 281 PTK 283
>AC024756-3|AAT81176.1| 529|Caenorhabditis elegans Spindle
defective protein 1 protein.
Length = 529
Score = 32.3 bits (70), Expect = 0.29
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = +3
Query: 351 FGERIVEA---HHMEMEREKDRILHDNDVKWKEAIDAKCKKLWEECSTEAANRNTQAIRQ 521
F ER++++ +H E+E L D + +W E + ++LWE+C A+R+ I +
Sbjct: 222 FSERLLDSLQSYHSELEPLYKHWLEDIEFRWTEK-HQQLQELWEKCLVSEADRHYSPIFE 280
Query: 522 AFK 530
K
Sbjct: 281 PTK 283
>Z83107-3|CAB05500.1| 529|Caenorhabditis elegans Hypothetical
protein F32A7.4 protein.
Length = 529
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = +3
Query: 351 FGERIVEAHHMEMEREKDRILHDNDVKWKEAIDAKCKKLWEECSTEAANRNTQAIRQAFK 530
FG ++ EA E+ E DRI+ + WK ++ K+ S N I + +
Sbjct: 137 FGGKVQEAQQYEIRNEVDRIMKKENFNWK-PLEITTKESAAAYSLARLAPNYAEITRTLE 195
Query: 531 EFSVV 545
EF+ +
Sbjct: 196 EFNTI 200
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +3
Query: 378 HMEMEREKDRIL--HDNDVKWKEAIDAKCKK 464
HM++ +K RIL +DND KWK +D + K
Sbjct: 27 HMDLPVDKLRILRGYDNDKKWKLIVDQQVAK 57
>Z72508-7|CAA96642.1| 336|Caenorhabditis elegans Hypothetical
protein F28H7.11 protein.
Length = 336
Score = 28.3 bits (60), Expect = 4.7
Identities = 40/138 (28%), Positives = 58/138 (42%), Gaps = 6/138 (4%)
Frame = -1
Query: 476 FLPKFF---TFSVNCLFPFDVIIMEYPILFS---LHFHVMCFNDSFSKVSNTFKTELRKM 315
F+PKFF +F +N LF F ++ Y + S L F+ FN S S + +TF +
Sbjct: 9 FIPKFFALCSFLINPLFIFMIMKDTYLNMGSYKYLLFYFSIFNMSCS-LCDTF-VPICIF 66
Query: 314 TFLYWFQNCPAF*QIFWWDVPITASTFQSWF*TSQYLQFRRH*FEVNFGQRFRHFVYHNT 135
+ Y F F +++ P + F S Y+ +F R+ HN
Sbjct: 67 NYRYAFT---IFVADGYFETPSEFGRYLLGFRCS-YITGTYAILHAHFLYRYMTLFCHNF 122
Query: 134 LGRYLLPFQITFSQIKVL 81
L RY LP I S I L
Sbjct: 123 LERYFLPHGIVVSVIYCL 140
>AF016665-3|AAC71182.3| 330|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 261 protein.
Length = 330
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +3
Query: 531 EFSVVYMTSLTRIESLMSHAANIEVMRTSE 620
EFS V++ SL R SLMSH+ N E+ RT +
Sbjct: 193 EFSNVWIDSL-REYSLMSHSHNKEISRTDK 221
>AF016654-8|AAB66025.2| 331|Caenorhabditis elegans Hypothetical
protein C17A2.1 protein.
Length = 331
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +3
Query: 531 EFSVVYMTSLTRIESLMSHAANIEVMRTSE 620
EFS V++ SL R SLMSH+ N E+ RT +
Sbjct: 194 EFSNVWIDSL-REYSLMSHSHNKEISRTDK 222
>AC006630-4|AAK68324.1| 311|Caenorhabditis elegans Hypothetical
protein F14H12.2 protein.
Length = 311
Score = 28.3 bits (60), Expect = 4.7
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = +1
Query: 304 YKNVILRNSVLKVLLTLEKESLKHITWKWREKRIGYSMIMTSNGKRQLTLNVKNFGRNVQ 483
YKN+ N++L VL S K I W+ +K I + N + +++
Sbjct: 74 YKNLCWLNTMLNVLFKSTSFSKKFIEWQ-NDKSISNELGNIFNKNTKSASKLRSMMDKDF 132
Query: 484 RKPQTGIPKLFDRHLKS 534
RK IP F LK+
Sbjct: 133 RKGPQAIPNAFPAFLKN 149
>Z68161-11|CAA92300.1| 347|Caenorhabditis elegans Hypothetical
protein F20C5.6 protein.
Length = 347
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 337 KVLLTLEKESLKHITWKWREKRIGYSMIMTSNGKRQ 444
K L E LK T +W+ +G ++T+N KR+
Sbjct: 214 KATLNTSVEDLKLRTEEWKHNLLGQFEVLTANSKRE 249
>Z68159-12|CAA92289.1| 347|Caenorhabditis elegans Hypothetical
protein F20C5.6 protein.
Length = 347
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 337 KVLLTLEKESLKHITWKWREKRIGYSMIMTSNGKRQ 444
K L E LK T +W+ +G ++T+N KR+
Sbjct: 214 KATLNTSVEDLKLRTEEWKHNLLGQFEVLTANSKRE 249
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 126 PTQSVMIDKMSKPLAEVYFKSMTPKLKVLAGLEPRLK 236
P V+++K++KP+ KS T K + PRL+
Sbjct: 8833 PVPPVILNKLTKPITHQAGKSFTYKFNFMGAPAPRLR 8869
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 126 PTQSVMIDKMSKPLAEVYFKSMTPKLKVLAGLEPRLK 236
P V+++K++KP+ KS T K + PRL+
Sbjct: 8853 PVPPVILNKLTKPITHQAGKSFTYKFNFMGAPAPRLR 8889
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 126 PTQSVMIDKMSKPLAEVYFKSMTPKLKVLAGLEPRLK 236
P V+++K++KP+ KS T K + PRL+
Sbjct: 8853 PVPPVILNKLTKPITHQAGKSFTYKFNFMGAPAPRLR 8889
>AC024830-4|AAF59603.1| 211|Caenorhabditis elegans Hypothetical
protein Y55F3BR.7 protein.
Length = 211
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 353 KVSNTFKTELRKMTFLYWFQNCPAF*QIFWWD 258
K S T ++ L++FQN P F IF+W+
Sbjct: 72 KTSITTDKKISDQNTLFFFQNFPIFSGIFYWN 103
>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of
glp-1 protein.
Length = 1492
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 363 IVEAHHMEMEREKDRILHDNDVKWKEAIDA 452
++ A E+E D I HD K ++AIDA
Sbjct: 322 VISAKQRNAEKENDFIYHDRVPKQEDAIDA 351
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 363 IVEAHHMEMEREKDRILHDNDVKWKEAIDA 452
++ A E+E D I HD K ++AIDA
Sbjct: 342 VISAKQRNAEKENDFIYHDRVPKQEDAIDA 371
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,337,471
Number of Sequences: 27780
Number of extensions: 316008
Number of successful extensions: 1066
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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