Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24d12
(590 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U67956-1|AAB07690.2| 157|Caenorhabditis elegans Hypothetical pr... 40 0.001
AL110500-20|CAI79282.1| 110|Caenorhabditis elegans Hypothetical... 39 0.003
Z47069-3|CAE17781.1| 141|Caenorhabditis elegans Hypothetical pr... 36 0.016
AF068714-8|AAC17809.2| 86|Caenorhabditis elegans Hypothetical ... 28 4.3
U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical pr... 28 5.7
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 28 5.7
AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical ... 28 5.7
AL032626-6|CAA21526.1| 132|Caenorhabditis elegans Hypothetical ... 27 7.5
U39745-7|AAA80449.1| 612|Caenorhabditis elegans Uncoordinated p... 27 10.0
M80241-1|AAA28157.1| 612|Caenorhabditis elegans unc-6 protein. 27 10.0
AF045642-7|AAC02583.1| 592|Caenorhabditis elegans Hypothetical ... 27 10.0
>U67956-1|AAB07690.2| 157|Caenorhabditis elegans Hypothetical
protein F16F9.1 protein.
Length = 157
Score = 40.3 bits (90), Expect = 0.001
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 461 TCVLYSFAVYVAGPVLAFPYCGKSCRNATHYCPNCSAYIG 580
T +++ + P+ P+C SC++A HYCP C+A +G
Sbjct: 112 TWIVFILVLICFFPLAFVPFCLDSCKDAHHYCPRCNALLG 151
>AL110500-20|CAI79282.1| 110|Caenorhabditis elegans Hypothetical
protein Y87G2A.19 protein.
Length = 110
Score = 38.7 bits (86), Expect = 0.003
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = +2
Query: 515 PYCGKSCRNATHYCPNCSAYIGSY 586
P+C ++ ++A HYCP+C A+IG+Y
Sbjct: 80 PFCVETFKDAEHYCPSCRAWIGTY 103
>Z47069-3|CAE17781.1| 141|Caenorhabditis elegans Hypothetical
protein F36G3.3 protein.
Length = 141
Score = 36.3 bits (80), Expect = 0.016
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 515 PYCGKSCRNATHYCPNCSAYIG 580
P+C +SC++ H CPNC A IG
Sbjct: 115 PFCLRSCKDIIHTCPNCRAMIG 136
>AF068714-8|AAC17809.2| 86|Caenorhabditis elegans Hypothetical
protein B0348.2 protein.
Length = 86
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = +2
Query: 479 FAVYVAGPVLAFPYCGKSC----RNATHYCPNCSAYI 577
+ V++ G +L +P C C ++ HYCP+C +
Sbjct: 43 WVVFIIGCLLFWPICYWLCCDSSKDTMHYCPSCGTLL 79
>U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical
protein T13H2.5b protein.
Length = 1092
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +1
Query: 325 VPTVPTQQFITVQAPQMGP 381
VP PTQQF T Q P GP
Sbjct: 340 VPQKPTQQFATPQQPVRGP 358
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein
T13H2.5a protein.
Length = 2471
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +1
Query: 325 VPTVPTQQFITVQAPQMGP 381
VP PTQQF T Q P GP
Sbjct: 1719 VPQKPTQQFATPQQPVRGP 1737
>AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical
protein Y40H7A.11 protein.
Length = 124
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 464 CVLYSFAVYVAGPVLAFPYCGKSCRNATHYCPNCSAYI 577
C SF + +L FP ++A H+CPNC + +
Sbjct: 85 CATLSFCFFFCCYLLFFPIT----KDAQHFCPNCGSLL 118
>AL032626-6|CAA21526.1| 132|Caenorhabditis elegans Hypothetical
protein Y37D8A.6 protein.
Length = 132
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +1
Query: 325 VPTVPTQQFITVQAPQMGPKPARYT--CPSCKASITTRVE 438
V V Q I + +M P YT CP C ++ TRVE
Sbjct: 44 VYVVQQPQEIIIVGTKMAPSFEPYTEFCPRCNTNVCTRVE 83
>U39745-7|AAA80449.1| 612|Caenorhabditis elegans Uncoordinated
protein 6 protein.
Length = 612
Score = 27.1 bits (57), Expect = 10.0
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -3
Query: 429 GRDGRFAAWAGIACRLRAHLRRLNCDELLSRYSGNDMI*ICLH 301
GR +A + +AC H +R D L R SGN +CL+
Sbjct: 334 GRATANSANSCVACNCNQHAKRCRFDAELFRLSGNRSGGVCLN 376
>M80241-1|AAA28157.1| 612|Caenorhabditis elegans unc-6 protein.
Length = 612
Score = 27.1 bits (57), Expect = 10.0
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -3
Query: 429 GRDGRFAAWAGIACRLRAHLRRLNCDELLSRYSGNDMI*ICLH 301
GR +A + +AC H +R D L R SGN +CL+
Sbjct: 334 GRATANSANSCVACNCNQHAKRCRFDAELFRLSGNRSGGVCLN 376
>AF045642-7|AAC02583.1| 592|Caenorhabditis elegans Hypothetical
protein C17H12.4 protein.
Length = 592
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Frame = -2
Query: 322 HDINLFTSGYCMAAG--FE*FLLCLRQTNR 239
HD++LF CM++G FE + +++TNR
Sbjct: 228 HDLSLFQQSICMSSGHDFETLEIQIQKTNR 257
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,007,721
Number of Sequences: 27780
Number of extensions: 303677
Number of successful extensions: 798
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 798
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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