Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24d07
         (478 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    22   3.3  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   7.7  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   7.7  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   7.7  

>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 93  EFHLPGTKFSRCHSPTRWTEGRAP 164
           +FH+PG   +  +SP  W     P
Sbjct: 205 DFHIPGGGIAAENSPLYWGGADTP 228


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/38 (23%), Positives = 16/38 (42%)
 Frame = +1

Query: 148 QKAEPQSSGPNFVKFATKVANLSKLGPPKPTPTTSEAP 261
           Q  +P     + +    + AN+ + GPP   P   + P
Sbjct: 177 QHHQPHHQQQHMMYGGQQGANMHQQGPPHQQPPIQQQP 214


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 433 FXDNAMIIIRNKLNITTFHI 374
           F DN   I+  K N+T  H+
Sbjct: 233 FLDNVDTIMYEKTNVTFVHL 252


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/38 (23%), Positives = 16/38 (42%)
 Frame = +1

Query: 148 QKAEPQSSGPNFVKFATKVANLSKLGPPKPTPTTSEAP 261
           Q  +P     + +    + AN+ + GPP   P   + P
Sbjct: 179 QHHQPHHQQQHMMYGGQQGANMHQQGPPHQQPPIQQQP 216


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,781
Number of Sequences: 336
Number of extensions: 2713
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11141978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)