Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24d02
         (618 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   3.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   4.7  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   4.7  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   4.7  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   4.7  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    21   8.3  

>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 7/30 (23%), Positives = 19/30 (63%)
 Frame = +2

Query: 353 NDLHKQEVLAAEPVIRHHCRCMQQCKQATP 442
           ++++  E+LA+E +++++  C+      TP
Sbjct: 24  DNINVDEILASERLLKNYFNCIMDRGACTP 53


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 463 YGLRLQNWCCLFTLLHTATVMSDHWFSCK 377
           Y L+L N   +FT +    +  +H+FS K
Sbjct: 324 YSLQLINHRVVFTAMGLYVLNMEHFFSVK 352


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -3

Query: 562 LLNSMRYCISFRLYFCSCS 506
           LL    YC+     FC CS
Sbjct: 285 LLVDSTYCLFLLFVFCDCS 303


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -3

Query: 562 LLNSMRYCISFRLYFCSCS 506
           LL    YC+     FC CS
Sbjct: 285 LLVDSTYCLFLLFVFCDCS 303


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -3

Query: 562 LLNSMRYCISFRLYFCSCS 506
           LL    YC+     FC CS
Sbjct: 285 LLVDSTYCLFLLFVFCDCS 303


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 6/33 (18%), Positives = 21/33 (63%)
 Frame = +2

Query: 344 LQKNDLHKQEVLAAEPVIRHHCRCMQQCKQATP 442
           ++ ++++ +E+L ++ +  ++  C+ + K  TP
Sbjct: 25  IKYDNVNLKEILQSDRLTENYVNCLLEKKPCTP 57


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,159
Number of Sequences: 336
Number of extensions: 2570
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)