Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24d01
         (551 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    26   0.95 
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    23   5.0  
AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    23   8.8  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 25.8 bits (54), Expect = 0.95
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +3

Query: 81  HRCKIELYDSNKCYL*NMNLQPNIEKYGHKVVFIYRGR*TL 203
           + C    Y SNK +L + +L+ + E   HK V   RG  TL
Sbjct: 127 YMCNYCNYTSNKLFLLSRHLKTHSEDRPHKCVVCERGFKTL 167


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 290 LPSHGLRIKLISKYVLFCM 346
           +PS  L + L+ KY+LF M
Sbjct: 305 IPSTSLALPLLGKYLLFTM 323


>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 11/41 (26%), Positives = 18/41 (43%)
 Frame = -2

Query: 460 SVTTSAFPGHVGFNDLITFILLSTMTSIIYISFKQIRIHTK 338
           S TT  F   VGF++   F   ++   I ++      +H K
Sbjct: 343 SYTTDKFTEFVGFSNYFKFDKRTSQAMIFFLQMTLKDVHIK 383


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 450,177
Number of Sequences: 2352
Number of extensions: 7797
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51301854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)