Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24c20
         (558 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029949-1|ABM92823.1|  310|Drosophila melanogaster IP17161p pro...    30   1.8  
BT029942-1|ABM92816.1|  310|Drosophila melanogaster IP16861p pro...    30   1.8  
BT025196-1|ABF17887.1|  347|Drosophila melanogaster FI01126p pro...    29   4.3  
AE014134-115|AAN10498.1|  347|Drosophila melanogaster CG4427-PB,...    29   4.3  
AE014134-114|AAF51489.2|  428|Drosophila melanogaster CG4427-PA,...    29   4.3  

>BT029949-1|ABM92823.1|  310|Drosophila melanogaster IP17161p
           protein.
          Length = 310

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = -3

Query: 457 GE*PP*HGQKHSDRSCNIEKILAASSLLNLPAVSLHSGIQFYRQRL 320
           G+ P   GQ + D+S  +EK+    S      +++ SGI F++ RL
Sbjct: 250 GKKPVGKGQDNDDQSQEVEKVSKQKSAKKSGKLNVKSGINFFQNRL 295


>BT029942-1|ABM92816.1|  310|Drosophila melanogaster IP16861p
           protein.
          Length = 310

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = -3

Query: 457 GE*PP*HGQKHSDRSCNIEKILAASSLLNLPAVSLHSGIQFYRQRL 320
           G+ P   GQ + D+S  +EK+    S      +++ SGI F++ RL
Sbjct: 250 GKKPVGKGQDNDDQSQEVEKVSKQKSAKKSGKLNVKSGINFFQNRL 295


>BT025196-1|ABF17887.1|  347|Drosophila melanogaster FI01126p
           protein.
          Length = 347

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +1

Query: 157 KICR*RITRISKPSMQTPESDISRSVTPLRP 249
           K+ R R   ++ P +QTPE+ +++ VTP  P
Sbjct: 81  KMNRKRAAEVALPPVQTPETPVAKLVTPPAP 111


>AE014134-115|AAN10498.1|  347|Drosophila melanogaster CG4427-PB,
           isoform B protein.
          Length = 347

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +1

Query: 157 KICR*RITRISKPSMQTPESDISRSVTPLRP 249
           K+ R R   ++ P +QTPE+ +++ VTP  P
Sbjct: 81  KMNRKRAAEVALPPVQTPETPVAKLVTPPAP 111


>AE014134-114|AAF51489.2|  428|Drosophila melanogaster CG4427-PA,
           isoform A protein.
          Length = 428

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +1

Query: 157 KICR*RITRISKPSMQTPESDISRSVTPLRP 249
           K+ R R   ++ P +QTPE+ +++ VTP  P
Sbjct: 162 KMNRKRAAEVALPPVQTPETPVAKLVTPPAP 192


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,133,084
Number of Sequences: 53049
Number of extensions: 543088
Number of successful extensions: 1082
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1082
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2151905496
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)