Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte24c19
(503 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56568| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.10
SB_19362| Best HMM Match : M (HMM E-Value=0.0014) 32 0.23
SB_37866| Best HMM Match : CDC37 (HMM E-Value=0.81) 30 0.94
SB_32454| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.94
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_44844| Best HMM Match : DUF164 (HMM E-Value=0.094) 29 1.6
SB_47070| Best HMM Match : V-set (HMM E-Value=0.085) 29 1.6
SB_25075| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_7993| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_58390| Best HMM Match : DUF1167 (HMM E-Value=0) 29 2.9
SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06) 29 2.9
SB_26701| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 28 3.8
SB_46788| Best HMM Match : LRR_1 (HMM E-Value=9.1e-12) 28 5.0
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 28 5.0
SB_18982| Best HMM Match : M (HMM E-Value=1.1e-06) 28 5.0
SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07) 28 5.0
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_55414| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-08) 27 6.6
SB_15981| Best HMM Match : Defensin_2 (HMM E-Value=1.1) 27 6.6
SB_11530| Best HMM Match : 7tm_1 (HMM E-Value=5.1e-30) 27 6.6
SB_5496| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_46747| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_46506| Best HMM Match : DUF827 (HMM E-Value=6.9) 27 8.8
SB_17447| Best HMM Match : zf-B_box (HMM E-Value=0.04) 27 8.8
>SB_56568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 33.5 bits (73), Expect = 0.10
Identities = 27/100 (27%), Positives = 51/100 (51%)
Frame = +3
Query: 96 FEKLQKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDINNIDINKLKEVINKM 275
+ L+K+ +N V + K K + + + E+ + L + V D+ I + K + +NK+
Sbjct: 194 YNSLRKEKENLVSELTK--KFEMLEGQKSSLVEENKVLQDSVKDLK-IRLKKSNQDLNKI 250
Query: 276 AAEQKKNVEELTTMLEKQPPKVLDALQAGASAFKAALEKK 395
E K +EE+ M++K+ K L+ S K+ LEK+
Sbjct: 251 TEELKSTLEEI-EMVKKKGNKDLEEKVGVLSKEKSNLEKE 289
>SB_19362| Best HMM Match : M (HMM E-Value=0.0014)
Length = 722
Score = 32.3 bits (70), Expect = 0.23
Identities = 23/82 (28%), Positives = 38/82 (46%)
Frame = +3
Query: 21 KQQHLDSVXXXXXXXXXXXXXMDQFFEKLQKDGKNSVDNIIKWMKDSKIIDEVKASEEKA 200
K++H+DSV MDQ E ++K+ + + + ++ + + A E
Sbjct: 379 KEKHIDSVKKDNQG-------MDQAMEAMKKELVATRSEMQRLKREHERLQRENAEREID 431
Query: 201 RKLFEGVPDINNIDINKLKEVI 266
R EGV NN IN+LKE +
Sbjct: 432 RLTTEGVTKANNSKINQLKEQV 453
>SB_37866| Best HMM Match : CDC37 (HMM E-Value=0.81)
Length = 461
Score = 30.3 bits (65), Expect = 0.94
Identities = 20/73 (27%), Positives = 38/73 (52%)
Frame = +3
Query: 108 QKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDINNIDINKLKEVINKMAAEQ 287
QK+ KN ++N +K SKI+ +K+S +KL + N+ +K+ K + E
Sbjct: 316 QKEKKNKINNDVKSKSKSKIVKILKSS----KKLKKDGRKAKNLKDSKVNLEKAKNSTED 371
Query: 288 KKNVEELTTMLEK 326
K ++ E+ + E+
Sbjct: 372 KGSIAEIAHLKEQ 384
>SB_32454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1161
Score = 30.3 bits (65), Expect = 0.94
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +3
Query: 174 EVKASEEKARKLFEGVPDINNIDINKLKEVINKMAAEQKKNVEELTTMLEKQ 329
E+ E+ RKL +I+KL E + K A Q+K EEL EK+
Sbjct: 715 EMNRKNERERKLLREENKKLQSEIDKLSESLEKSVAVQRKMEEELRDSSEKR 766
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 29.9 bits (64), Expect = 1.2
Identities = 22/96 (22%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Frame = +3
Query: 99 EKLQKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGV-PDINNIDINKLK--EVIN 269
++++KD +N + II+WM + I E + L V +++ ++ L+ +++
Sbjct: 5063 QQIEKDLENEISEIIEWMNEVARITEKETLTRHDDTLLSSVESNLDGLEDKSLRVSQLVE 5122
Query: 270 KMAAEQKKNVEELTTMLEKQPPKVLDALQAGASAFK 377
KM E +N ++ +++++ ++LD L+ AFK
Sbjct: 5123 KM-EELPENKQK--QVIKEKLSQLLDQLKKQKVAFK 5155
>SB_44844| Best HMM Match : DUF164 (HMM E-Value=0.094)
Length = 332
Score = 29.5 bits (63), Expect = 1.6
Identities = 20/76 (26%), Positives = 39/76 (51%)
Frame = +3
Query: 168 IDEVKASEEKARKLFEGVPDINNIDINKLKEVINKMAAEQKKNVEELTTMLEKQPPKVLD 347
I+++K E+ + + N ++ KLKE I+ + E+K+ EEL ++ K L
Sbjct: 48 IEKLKQEIEQKEREINNLRKTRNDEVKKLKERIHVLEEEKKRLEEELASVKYK-----LT 102
Query: 348 ALQAGASAFKAALEKK 395
AL++ A A +++
Sbjct: 103 ALESEVKALSNANDRQ 118
>SB_47070| Best HMM Match : V-set (HMM E-Value=0.085)
Length = 260
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +3
Query: 120 KNSVDNIIKWMKDSKIIDEVKASEEK 197
+N +D+I W+KD+K+IDE + E+K
Sbjct: 36 RNPIDHIA-WIKDNKLIDETFSPEKK 60
>SB_25075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +3
Query: 120 KNSVDNIIKWMKDSKIIDEVKASEEK 197
+N +D+I W+KD+K+IDE + E+K
Sbjct: 51 RNPIDHIA-WIKDNKLIDETFSPEKK 75
>SB_7993| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 676
Score = 29.5 bits (63), Expect = 1.6
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +3
Query: 108 QKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDIN-NIDINKLKEVINKMAAE 284
+KDGK V + +S I +E+ + EGV + ++D N+ K V + AE
Sbjct: 457 RKDGKEEVTPPLNEQTESDISNEINKGPDSKGGSLEGVGGKDASVDANE-KSVPKQETAE 515
Query: 285 QKKNVEELTTMLEKQ 329
+K N E + ++++
Sbjct: 516 EKDNSETTESNVQEE 530
>SB_58390| Best HMM Match : DUF1167 (HMM E-Value=0)
Length = 734
Score = 28.7 bits (61), Expect = 2.9
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +3
Query: 141 IKWMKDSKIIDEVKASEEKARKL-FEGVPDINNIDINKLKEVINKMAAEQKKNVEELTT- 314
+KW+ + +I +K +EK RKL E +N+ + K ++++ V + T
Sbjct: 331 VKWITLTAVISALKGLQEKIRKLELERTDAEDNLKRLAAESKHYKEVLQKEQTVRSVNTG 390
Query: 315 MLEKQPPKVLDALQAGASAFKAALEKK*PY 404
++ KQ + D L A A A LEK+ Y
Sbjct: 391 VISKQNEALQDDLHA-AEARCNLLEKQLDY 419
>SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06)
Length = 1292
Score = 28.7 bits (61), Expect = 2.9
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = +3
Query: 105 LQKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDINNIDINKLKEVINKMAAE 284
+Q DG + S+++D + +L E I+ +D + LKE +NK AA
Sbjct: 792 VQNDGSLKLQQDEMQKASSELLDTKSTMDALRAQLVEKQNKISELD-SLLKETVNKNAAS 850
Query: 285 QKKNVEELTTMLEK 326
K E L+K
Sbjct: 851 LKACEERYNEQLDK 864
>SB_26701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 409
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 179 ESFRGEGAKVVRRRSGYQQYRHK*IERGYQQNGRRTEEKR 298
+++RG G + RR Y+ YR E G GR E+ R
Sbjct: 347 DNYRGRGDEYRRRDEDYRGYREDRREHGEDYRGRGREKAR 386
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 214 SNNFRAFSSEAFTSSIILESFIHLIMLSTLFFPSFCSFSKNW 89
SN+ R F S F + ++ + S++ FPS SF K+W
Sbjct: 179 SNSLRIFFSAVFLFIVYYKTADDISSRSSVTFPSLDSFIKDW 220
>SB_46788| Best HMM Match : LRR_1 (HMM E-Value=9.1e-12)
Length = 139
Score = 27.9 bits (59), Expect = 5.0
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +3
Query: 273 MAAEQKKNVEELTTMLEKQPPKVLDALQAGASAFKAALEKK*PYQHHV-KT*FSSS 437
+ A + K V E+ T LEK +L + GA + + Y HHV KT FS S
Sbjct: 73 LEANELKIVPEVVTKLEKLQVLILSDNEIGALPADLGIPGRAFYSHHVWKTSFSWS 128
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 27.9 bits (59), Expect = 5.0
Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +3
Query: 96 FEKLQKDGKNSVDNIIKWMKDSKIIDEVKASEEKARKLFEGVPDINNIDINKLKEVINKM 275
F+K+ D ++ + + + K+I+E + +K + D + I L+E N M
Sbjct: 25 FQKVYSDNESLQKRVSELEEHQKVIEETNETLKKQHETVLFEKDELTLTIKTLQEEFNTM 84
Query: 276 AAEQKK---NVEELTTMLEKQ 329
E +K +E L T ++ Q
Sbjct: 85 LQEYEKLKAKMENLPTEMDGQ 105
>SB_18982| Best HMM Match : M (HMM E-Value=1.1e-06)
Length = 825
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/64 (20%), Positives = 36/64 (56%)
Frame = +3
Query: 156 DSKIIDEVKASEEKARKLFEGVPDINNIDINKLKEVINKMAAEQKKNVEELTTMLEKQPP 335
+ ++ ++ ++ + R L + + ++NN + + L+ V+N + EQK ++ + L K+
Sbjct: 434 NEELESKLNRTDAQGRVLSQSLKELNNRNYDALENVLNDI--EQKSSLSDAIDYLRKEIR 491
Query: 336 KVLD 347
++ D
Sbjct: 492 RIKD 495
>SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07)
Length = 1447
Score = 27.9 bits (59), Expect = 5.0
Identities = 18/74 (24%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +3
Query: 99 EKLQKDGKNSVDNIIKWMKDSKI-IDEVKASEEKARKLFEGVPDINNIDINKLKEVINKM 275
+K+QK + + +IK +D K+ +DE + SE+ K + + + +++++E+ KM
Sbjct: 445 QKMQKQHNDDMAELIKRFEDEKMKLDEARESEK--AKTTQHLTKAERV-LSEMEEIKLKM 501
Query: 276 AAEQKKNVEELTTM 317
A +++ + TT+
Sbjct: 502 KAIEQEKLSLQTTV 515
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/64 (20%), Positives = 36/64 (56%)
Frame = +3
Query: 156 DSKIIDEVKASEEKARKLFEGVPDINNIDINKLKEVINKMAAEQKKNVEELTTMLEKQPP 335
+ ++ ++ ++ + R L + + ++NN + + L+ V+N + EQK ++ + L K+
Sbjct: 412 NEELESKLNRTDAQGRVLSQSLKELNNRNYDALENVLNDI--EQKSSLSDAIDYLRKEIR 469
Query: 336 KVLD 347
++ D
Sbjct: 470 RIKD 473
>SB_55414| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-08)
Length = 595
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = -2
Query: 319 SMVVNSSTFFFCSAAILLITSFNLFMSILLISGTPSNNFRAF 194
S++V ++ FFF + IL + F+ ++L + N+ RAF
Sbjct: 447 SLMVLTNFFFFVTPMILFLIYVYRFVDLMLDAAVTLNSLRAF 488
>SB_15981| Best HMM Match : Defensin_2 (HMM E-Value=1.1)
Length = 890
Score = 27.5 bits (58), Expect = 6.6
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +3
Query: 156 DSKIIDEVKASEEKARKLFEGVPDINNIDINKLKEVINKMA-AEQKKNVEELTTMLEKQP 332
D + DE E+K +K+ E P +N+ +NK +E +A E + + E++
Sbjct: 271 DGEDRDEGVEGEDKRQKVVEHRPIASNVSLNKDEESDELLALMEGTLSRQSSVKEEEEEG 330
Query: 333 PKVLDALQAGASAFKAA 383
+ +D + G A+ AA
Sbjct: 331 EQPVDNIPEGVGAYGAA 347
>SB_11530| Best HMM Match : 7tm_1 (HMM E-Value=5.1e-30)
Length = 455
Score = 27.5 bits (58), Expect = 6.6
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 189 EEKARKLFEGVPDINNIDINKLKEVINKMAAEQKKNVEELTTMLEK 326
++K+ LFE VPD+ + N K+ I K E+ ++E +LEK
Sbjct: 52 KKKSCALFE-VPDVIPVMTNNYKDSIMKGVKEEAYSLESSQELLEK 96
>SB_5496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1352
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -1
Query: 170 YYFRIFHPFDNVVDAVLSVFL*FF 99
YYFR HP+ ++ + L VFL FF
Sbjct: 54 YYFR--HPWSRIITSYLVVFLNFF 75
>SB_46747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 576
Score = 27.1 bits (57), Expect = 8.8
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +3
Query: 225 DINNIDINKLKEVINKMAAEQKKNVEELTTMLEKQPP--KVLDALQAGASAFKAALEKK* 398
DI +NK+ +K +K+N+ L +L KQP K+ L+ +FK +K
Sbjct: 122 DIKESSVNKMW--FDKECKNEKENLRSLGKLLSKQPDQRKLGAVLKEKKKSFKKLCRRK- 178
Query: 399 PYQHH 413
Y H+
Sbjct: 179 KYTHY 183
>SB_46506| Best HMM Match : DUF827 (HMM E-Value=6.9)
Length = 261
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/69 (21%), Positives = 35/69 (50%)
Frame = +3
Query: 162 KIIDEVKASEEKARKLFEGVPDINNIDINKLKEVINKMAAEQKKNVEELTTMLEKQPPKV 341
K+ +E+K + + + +P+ + + K K K +E+ N+E++ + L + ++
Sbjct: 180 KLAEELKENLNSLKSVVAQMPEELSTYVEKAKFKTTKFGSEEMTNMEKMQSKLMETEMQL 239
Query: 342 LDALQAGAS 368
ALQ A+
Sbjct: 240 DMALQRAAA 248
>SB_17447| Best HMM Match : zf-B_box (HMM E-Value=0.04)
Length = 1223
Score = 27.1 bits (57), Expect = 8.8
Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 4/70 (5%)
Frame = +3
Query: 222 PDINNIDINKLKEVINKMAAEQKKNV----EELTTMLEKQPPKVLDALQAGASAFKAALE 389
PD+ N ++ K A ++KK V +E T QP +D A F E
Sbjct: 140 PDLKNESWDRFLPKFRKKAVKKKKKVPKTKKEYTPFPPPQPESKMDKELASGEYFLKEKE 199
Query: 390 KK*PYQHHVK 419
+K QH K
Sbjct: 200 RKAQAQHERK 209
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,881,863
Number of Sequences: 59808
Number of extensions: 197213
Number of successful extensions: 625
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 624
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1099461690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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