Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24c16
         (650 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    26   1.2  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    26   1.2  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   2.1  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       25   2.7  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    23   6.3  

>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -3

Query: 156 RLSVPSSLRDDVQQSIFHCNLFHGIYLFMKSDYYEIF 46
           R  +  +L D+V+  ++       +Y+F+K  YY  F
Sbjct: 445 RFGIRETLLDNVKDEVYAKENLALVYIFVKDTYYRSF 481


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -3

Query: 156 RLSVPSSLRDDVQQSIFHCNLFHGIYLFMKSDYYEIF 46
           R  +  +L D+V+  ++       +Y+F+K  YY  F
Sbjct: 445 RFGIRETLLDNVKDEVYAKENLALVYIFVKDTYYRSF 481


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +3

Query: 93  TNYNEKLTAGHRPLTMMEQRVASV 164
           TNYN K  AGH  L    QR +S+
Sbjct: 76  TNYNFKSYAGHVMLGPFHQRFSSI 99


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 374 SHVLEVPLHVFTVLVM 327
           SHVL++PLH    +VM
Sbjct: 840 SHVLQIPLHATVEMVM 855


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -1

Query: 413 EYVLRREVVPEHLSHVLEVPLHVFTVLVM 327
           E VL  EV  E+LSH   +  H F V+ M
Sbjct: 623 EVVLVDEVQQENLSHPFHLHGHAFHVIGM 651


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 664,308
Number of Sequences: 2352
Number of extensions: 13601
Number of successful extensions: 30
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)