Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24c10
         (502 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation...    29   2.5  
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini...    29   2.5  
AF099914-7|AAC68762.1|  220|Caenorhabditis elegans Hypothetical ...    29   2.5  
Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical pr...    28   4.4  
Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical pr...    28   4.4  
AF067220-1|AAK84500.1| 1014|Caenorhabditis elegans Hypothetical ...    28   4.4  
AC024859-5|AAK29972.3|  360|Caenorhabditis elegans Hypothetical ...    27   7.6  

>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
            germline protein5 protein.
          Length = 1200

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +2

Query: 41   KTLK*TLKSHYELLSSCTKRISRTRKTLCSTFYQYQIQTQSAKG 172
            K L   +  H  L+ SC + +SR +K +CS F++   +    +G
Sbjct: 1055 KQLLGIMDRHKLLMVSCGRDVSRVQKAICSGFFRNAAKRDPQEG 1098


>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
            protein MOG-5 protein.
          Length = 1200

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +2

Query: 41   KTLK*TLKSHYELLSSCTKRISRTRKTLCSTFYQYQIQTQSAKG 172
            K L   +  H  L+ SC + +SR +K +CS F++   +    +G
Sbjct: 1055 KQLLGIMDRHKLLMVSCGRDVSRVQKAICSGFFRNAAKRDPQEG 1098


>AF099914-7|AAC68762.1|  220|Caenorhabditis elegans Hypothetical
           protein C40A11.7 protein.
          Length = 220

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -1

Query: 448 IKRHYRTYISSDKI-QIFTVNKKPYHVLKITLNKNEFIYL 332
           I    RTY SS ++ QI    KKP  V+    + N+ IY+
Sbjct: 101 INNQIRTYRSSHELLQIIASTKKPVVVINYITHNNDIIYI 140


>Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical
           protein F15D4.1 protein.
          Length = 1529

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 173 SLARLMALKPLIKTEKRRDLTDHRYN 250
           S A    ++P +KTEK+R+  D RYN
Sbjct: 593 SKAAYSIVRPNLKTEKQRESIDSRYN 618


>Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical
           protein F15D4.1 protein.
          Length = 1529

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 173 SLARLMALKPLIKTEKRRDLTDHRYN 250
           S A    ++P +KTEK+R+  D RYN
Sbjct: 593 SKAAYSIVRPNLKTEKQRESIDSRYN 618


>AF067220-1|AAK84500.1| 1014|Caenorhabditis elegans Hypothetical
           protein C33E10.6 protein.
          Length = 1014

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -1

Query: 466 IYNVFIIKRHYRTYISSDKIQIFT-VNKKPYHVLKITLNKNEF 341
           I+  F     Y  Y+ ++ +  +  + K PY  +K  +NKNEF
Sbjct: 530 IFETFHKSNTYLMYLDANNLYGWAMIQKLPYDNIKFEMNKNEF 572


>AC024859-5|AAK29972.3|  360|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.7 protein.
          Length = 360

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +2

Query: 188 MALKPLIKTEKRRDLTDHRYNQEKYYHVVVHSCVNFGICF 307
           MALK L  T K+R + D    +EKY  +  H+ +   +CF
Sbjct: 227 MALKVLTFTMKKRGMID----EEKYNDLWQHTLIVLDVCF 262


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,333,278
Number of Sequences: 27780
Number of extensions: 195342
Number of successful extensions: 487
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 487
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)