Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24c09
         (641 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    27   0.50 
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   8.2  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        23   8.2  

>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 27.1 bits (57), Expect = 0.50
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +3

Query: 462 SSKKLTNSALCDFSSNYRRRQSTEWAPVNVVKPDP 566
           SS +L+NS+LC  SS       T   P N   P P
Sbjct: 188 SSNQLSNSSLCSASSGSSTYYGTMSEPSNASSPAP 222


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -1

Query: 224 IADPILVLGTMTRVPRNIMRLGD 156
           ++DP L+ G +   P N++ L D
Sbjct: 445 VSDPNLIEGGLLYTPENLINLSD 467


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 14/60 (23%), Positives = 25/60 (41%)
 Frame = -3

Query: 369 GNVRSRCLSRSVLDGRSGSHRPFYRIAPASLNAARSDREGSCVLSSHTYRRSDTCTRDND 190
           G+ RSR +          SHRP Y      L++A+ ++    V+S         C ++ +
Sbjct: 48  GDKRSRMIKELYQQTEPKSHRPSYANKAVLLSSAKWEQMWKKVVSPAEKETEVLCQQERE 107


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 728,020
Number of Sequences: 2352
Number of extensions: 16138
Number of successful extensions: 31
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)