Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte24c05
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   0.46 
AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease pr...    25   2.5  
AF203337-1|AAF19832.1|  184|Anopheles gambiae immune-responsive ...    25   2.5  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   7.5  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   9.9  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.1 bits (57), Expect = 0.46
 Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
 Frame = +1

Query: 223 PKKHPWRPIMGYEEIEVTPMPSQPITNTMVDPCYTPAGMAAEPLRFPNLVTGFDRSPEH- 399
           P  HP  P +G       P   QP   + ++  +  AGM  +P   P    G    P   
Sbjct: 578 PSHHPLHPSLGLSMGLGLPQVPQPPAGSSLNLSHPSAGMVPQPPP-PGSALGHPSIPTSL 636

Query: 400 AARAALYT 423
           AA AA Y+
Sbjct: 637 AAAAAAYS 644



 Score = 24.2 bits (50), Expect = 3.2
 Identities = 12/37 (32%), Positives = 14/37 (37%)
 Frame = +3

Query: 306 HGGPVLHASRHGGRAAPVPEPSDRLRPQPRARGPSSS 416
           HG P+   S       P P P+ R  P       SSS
Sbjct: 727 HGAPLALTSSKSASTHPSPHPATRASPSSPIVATSSS 763


>AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease
           protein.
          Length = 364

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = +1

Query: 313 DPCYTPAGMA--AEPLRFPNLVTGFDRSPE 396
           DPC TP+G A   EP++  + V    +SP+
Sbjct: 29  DPCQTPSGTAGTCEPVKNCSYVRKILKSPD 58


>AF203337-1|AAF19832.1|  184|Anopheles gambiae immune-responsive
           serine protease-relatedprotein ISPR9 protein.
          Length = 184

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 200 CGGTLGPPAVSFTGLHC 150
           CGG+L  P+V  T  HC
Sbjct: 98  CGGSLIHPSVVLTAAHC 114


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = +2

Query: 185  PVSRHKWAIVSIHQKNTLGD 244
            P  RH WA  S+   NT  D
Sbjct: 1381 PRGRHSWASNSVEVPNTCSD 1400


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 9/15 (60%), Positives = 12/15 (80%), Gaps = 1/15 (6%)
 Frame = -2

Query: 171 LLYWTPLLK-LRAHC 130
           L +WTPLL+ LR +C
Sbjct: 286 LFWWTPLLRLLRENC 300


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,712
Number of Sequences: 2352
Number of extensions: 14128
Number of successful extensions: 32
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)